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tbdb.csv
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Jody Phelan committed Aug 28, 2019
1 parent ac1b79a commit 9f55768
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions tbdb.csv
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Original file line number Diff line number Diff line change
@@ -1,4 +1,5 @@
Gene,Mutation,Drug,Literature
gyrA,p.Ala90Gly,ofloxacin,
rrs,r.1158g>t,amikacin,
rrs,r.1338a>c,amikacin,
rrs,r.1401a>g,amikacin,
Expand Down Expand Up @@ -53,7 +54,6 @@ tlyA,p.Pro183Leu,capreomycin,
tlyA,p.Val128Glu,capreomycin,
gyrA,p.Ala74Ser,ciprofloxacin,
gyrA,p.Ala90Glu,ciprofloxacin,
gyrA,p.Ala90Val,ciprofloxacin,
gyrA,p.Arg68Gly,ciprofloxacin,
gyrA,p.Asp89Asn,ciprofloxacin,
gyrA,p.Asp94Ala,ciprofloxacin,
Expand Down Expand Up @@ -1514,4 +1514,4 @@ rrs,r.905c>g,streptomycin,
rrs,r.906a>g,streptomycin,
rrs,r.907a>c,streptomycin,
rrs,r.907a>t,streptomycin,
rrs,r.908a>g,streptomycin,
rrs,r.908a>g,streptomycin,

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Mutation confidence results

Mutations added

Drug Gene Mutation OR OR-pval LR LR-pval confidence
ofloxacin Rv0006 p.Ala90Gly 1.0198456449834619 0.990403825984912 1.0148842337375965 0.990380383935469 indeterminate

Mutations removed

Drug Gene Mutation OR OR-pval LR LR-pval confidence
ciprofloxacin Rv0006 p.Ala90Val 45.791752577319585 3.892778835172912e-08 6.893651654910473 4.857745251974204e-33 high

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