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portfolio.html
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---
title: Portfolio
---
<!DOCTYPE html>
<html>
<head>
<meta charset="utf-8">
<title>{{ page.title }}</title>
</head>
<body>
<div class="container">
<!-- Research Tools -->
<h1 class="subheading">- Research Tools -</h1>
<img src="assets/images/tool-headers/mine-website.jpg" class="paperHeaderImage">
<p class="bodyText imageCaption">
<a href="https://minedatabase.ci.northwestern.edu/"><u>MINE Database Website</u></a>: Useful for discovering novel biological compounds in metabolomics datasets. Built using AngularJS, Flask, and MongoDB.
See the <a href="https://github.com/tyo-nu/MINE-Server"><u>backend repo</u></a>, <a href="https://github.com/tyo-nu/MINE-app"><u>frontend repo</u></a>, and <a href="https://github.com/tyo-nu/MINE-Database"><u>compound prediction repo</u></a> for more information.
</p>
<!-- iOS Apps -->
<h1 class="subheading">- iOS Apps -</h1>
<p class="bodyText">
Coming soon!
</p>
<!-- Selected Publications -->
<h1 class="subheading">- Selected Publications -</h1>
<img src="assets/images/paper-headers/mine-2.jpg" class="paperHeaderImage">
<p class="bodyText imageCaption">
<b>Strutz J</b>, Shebek K, Broadbelt L, Tyo K (2022)
<a href="assets/pdfs/mine-2.pdf"><u>MINE 2.0: enhanced biochemical coverage for peak identification in untargeted metabolomics</u></a>. <i>Bioinformatics</i>, 38(13):3484-3487.
</p>
<img src="assets/images/paper-headers/ipa-lanzatech.jpg" class="paperHeaderImage">
<p class="bodyText imageCaption">
Liew EF, Nogle R, Abdalla T, Rasor BJ, Canter C, Jensen RO, Wang L, <b>Strutz J</b>, ..., Köpke M (2022)
<a href="assets/pdfs/ipa-lanzatech.pdf"><u>Carbon-negative production of acetone and isopropanol by gas fermentation at industrial pilot scale</u></a>. <i>Nature Biotechnology</i>, 40:335-344.
</p>
<img src="assets/images/paper-headers/jacs-tdt-recording.jpg" class="paperHeaderImage">
<p class="bodyText imageCaption">
Bhan NJ, Callisto A, <b>Strutz J</b>, Glaser J, Kalhor R, Boyden E, Church G, Kording K, Tyo KEJ (2021)
<a href="assets/pdfs/turtles-bhan-callisto-strutz.pdf"><u>Recording Temporal Signals with Minutes Resolution Using Enzymatic DNA Synthesis</u></a>. <i>Journal of the American Chemical Society</i>, 143:16630-16640.
</p>
<img src="assets/images/paper-headers/opinion-biotech-review.jpg" class="paperHeaderImage">
<p class="bodyText imageCaption">
<b>Strutz J</b>, Martin J, Greene J, Broadbelt L, Tyo K (2019)
<a href="assets/pdfs/biotech-review-strutz.pdf"><u>Metabolic kinetic modeling provides insight into complex biological questions, but hurdles remain</u></a>. <i>Current Opinion in Biotechnology</i>, 59:24-30.
</p>
<br>
<p class="bodyText">
See all my publications on my <a href="{{ site.data.links.papers.GoogleScholar }}"><u>Google Scholar profile</u></a>.
</p>
</div>
</body>
</html>