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lib.go
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package mast
import (
"context"
"fmt"
"reflect"
"sort"
)
// DefaultBranchFactor is how many entries per node a tree will normally have.
const DefaultBranchFactor = 16
// Mast encapsulates data and parameters for the in-memory portion of a Merkle Search Tree.
type Mast struct {
root interface{}
zeroKey interface{}
zeroValue interface{}
keyOrder func(_, _ interface{}) (int, error)
keyLayer func(key interface{}, branchFactor uint) (uint8, error)
unmarshalerUsesRegisteredTypes bool
marshal func(interface{}) ([]byte, error)
unmarshal func([]byte, interface{}) error
branchFactor uint
height uint8
size uint64
growAfterSize uint64
shrinkBelowSize uint64
persist Persist
debug bool
nodeCache NodeCache
nodeFormat nodeFormat
}
type mastNode struct {
Node
dirty bool
shared bool
expected *mastNode
source *string
}
type Node struct {
Key []interface{}
Value []interface{}
Link []interface{} `json:",omitempty"`
}
type pathEntry struct {
node *mastNode
linkIndex int
}
func (m *Mast) savePathForRoot(ctx context.Context, path []pathEntry) error {
for i := 0; i < len(path); i++ {
if !path[i].node.dirty {
path[i].node = path[i].node.ToMut(ctx, m)
path[i].node.dirty = true
path[i].node.expected = nil
path[i].node.source = nil
}
}
for i := len(path) - 2; i >= 0; i-- {
entry := path[i]
if !path[i+1].node.isEmpty() {
entry.node.Link[entry.linkIndex] = path[i+1].node
} else {
entry.node.Link[entry.linkIndex] = nil
}
}
if !path[0].node.isEmpty() {
m.root = path[0].node
} else {
m.root = nil
}
return nil
}
// Splits the given node into two: left and right, so they could be the left+right children of a
// parent entry with the given key. The key is not expected to already be present in the source
// node, and will panic--but it would not migrated to the output, so that the caller can decide
// where to put it and its new children.
func split(ctx context.Context, node *mastNode, key interface{}, mast *Mast) (leftLink, rightLink interface{}, err error) {
var splitIndex int
for splitIndex = 0; splitIndex < len(node.Key); splitIndex++ {
var cmp int
cmp, err = mast.keyOrder(node.Key[splitIndex], key)
if err != nil {
return nil, nil, fmt.Errorf("keyCompare: %w", err)
}
if cmp == 0 {
panic("split shouldn't need to handle preservation of already-present key")
}
if cmp > 0 {
break
}
}
var tooBigLink interface{} = nil
left := mastNode{
Node{
make([]interface{}, 0, cap(node.Key)),
make([]interface{}, 0, cap(node.Value)),
make([]interface{}, 0, cap(node.Link)),
},
true, false, nil, nil,
}
left.Key = append(left.Key, node.Key[:splitIndex]...)
left.Value = append(left.Value, node.Value[:splitIndex]...)
left.Link = append(left.Link, node.Link[:splitIndex+1]...)
// repartition the left and right subtrees based on the new key
leftMaxLink := left.Link[len(left.Link)-1]
if leftMaxLink != nil {
var leftMax *mastNode
leftMax, err = mast.load(ctx, leftMaxLink)
if mast.debug {
fmt.Printf(" splitting leftMax, node with keys: %v\n", leftMax.Key)
}
if err != nil {
return nil, nil, fmt.Errorf("loading leftMax: %w", err)
}
leftMaxLink, tooBigLink, err = split(ctx, leftMax, key, mast)
if err != nil {
return nil, nil, fmt.Errorf("splitting leftMax: %w", err)
}
if mast.debug {
fmt.Printf(" splitting leftMax, node with keys: %v is done: leftMaxLink=%v, tooBigLink=%v\n", leftMax.Key, leftMaxLink, tooBigLink)
}
left.Link[len(left.Link)-1] = leftMaxLink
}
if !left.isEmpty() {
leftLink, err = mast.store(&left)
if err != nil {
return nil, nil, fmt.Errorf("store left: %w", err)
}
}
right := mastNode{
Node{
make([]interface{}, 0, cap(node.Key)),
make([]interface{}, 0, cap(node.Value)),
make([]interface{}, 0, cap(node.Link)),
},
true, false, nil, nil,
}
right.Key = append(right.Key, node.Key[splitIndex:]...)
right.Value = append(right.Value, node.Value[splitIndex:]...)
right.Link = append(right.Link, node.Link[splitIndex:]...)
right.Link[0] = tooBigLink
rightMinLink := right.Link[0]
if rightMinLink != nil {
var rightMin *mastNode
rightMin, err = mast.load(ctx, rightMinLink)
if err != nil {
return nil, nil, fmt.Errorf("load rightMin: %w", err)
}
var tooSmallLink interface{}
tooSmallLink, rightMinLink, err = split(ctx, rightMin, key, mast)
if err != nil {
return nil, nil, fmt.Errorf("split rightMin: %w", err)
}
if mast.debug {
fmt.Printf(" splitting rightMin, node with keys %v, is done: tooSmallLink=%v, rightMinLink=%v",
rightMin.Key, tooSmallLink, rightMinLink)
}
right.Link[0] = rightMinLink
if tooSmallLink != nil {
panic("inconsistent node order: non-nil tooSmall")
}
}
if !right.isEmpty() {
rightLink, err = mast.store(&right)
if err != nil {
return nil, nil, err
}
}
// TODO: common case maybe not dirty
node.dirty = true
node.expected = nil
node.source = nil
return leftLink, rightLink, nil
}
func (node *mastNode) isEmpty() bool {
return len(node.Link) == 1 && node.Link[0] == nil
}
type findOptions struct {
targetLayer uint8
currentHeight uint8
createMissingNodes bool
path []pathEntry
}
func (node *mastNode) findNode(ctx context.Context, m *Mast, key interface{}, options *findOptions) (*mastNode, int, error) {
i := len(node.Key)
if len(node.Link) != i+1 {
node.dump(ctx, m)
panic(fmt.Sprintf("node %p doesn't have N+1 links", node))
}
var err error
cmp := -1
if i > 0 {
// check max first, optimizing for in-order insertion
cmp, err = m.keyOrder(key, node.Key[i-1])
if err != nil {
return nil, 0, fmt.Errorf("keyCompare: %w", err)
}
if cmp <= 0 {
i--
}
}
if cmp < 0 {
i = sort.Search(i, func(i int) bool {
if err != nil {
return true
}
cmp, err = m.keyOrder(key, node.Key[i])
if err != nil {
err = fmt.Errorf("keyCompare: %w", err)
return true
}
return cmp <= 0
})
}
options.path = append(options.path,
pathEntry{node, i})
if cmp == 0 || options.currentHeight == options.targetLayer {
return node, i, nil
}
child, err := node.follow(ctx, i, options.createMissingNodes, m)
if err != nil {
return nil, 0, fmt.Errorf("following %d: %w", i, err)
}
options.currentHeight--
return child.findNode(ctx, m, key, options)
}
func (node *mastNode) follow(ctx context.Context, i int, createOk bool, mast *Mast) (*mastNode, error) {
if node.Link[i] != nil {
child, err := mast.load(ctx, node.Link[i])
if err != nil {
return nil, fmt.Errorf("follow load %v: %w", node.Link[i], err)
}
return child, nil
} else if !createOk {
return node, nil
} else {
child := emptyNodePointer(cap(node.Key))
node.Link[i] = child
return child, nil
}
}
func uint8min(x, y uint8) uint8 {
if x < y {
return x
}
return y
}
func emptyNode(branchFactor int) mastNode {
newNode := mastNode{
Node: Node{
Key: make([]interface{}, 0, branchFactor),
Value: make([]interface{}, 0, branchFactor),
Link: make([]interface{}, 1, branchFactor+1),
},
}
newNode.Link[0] = nil
return newNode
}
func emptyNodePointer(branchFactor int) *mastNode {
node := emptyNode(branchFactor)
return &node
}
func (node *mastNode) extract(from, to int) *mastNode {
newChild := emptyNode(cap(node.Key))
newChild.Key = append([]interface{}{}, node.Key[from:to]...)
newChild.Value = append([]interface{}{}, node.Value[from:to]...)
newChild.Link = append([]interface{}{}, node.Link[from:to+1]...)
if len(newChild.Key) != len(newChild.Value) {
panic("keys and values not same length")
}
if len(newChild.Link) != len(newChild.Key)+1 {
panic("links is not expected length")
}
if newChild.isEmpty() {
return nil
}
newChild.dirty = true
newChild.expected = nil
newChild.source = nil
return &newChild
}
func (m *Mast) grow(ctx context.Context) error {
var node *mastNode
var err error
if m.debug {
fmt.Printf("GROWING\n")
}
node, err = m.load(ctx, m.root)
if err != nil {
return fmt.Errorf("load root: %w", err)
}
newNode := emptyNode(int(m.branchFactor))
start := 0
for i, key := range node.Key {
var layer uint8
layer, err = m.keyLayer(key, m.branchFactor)
if err != nil {
return fmt.Errorf("layer: %w", err)
}
if layer <= m.height {
continue
}
newLeftNode := node.extract(start, i)
if m.debug {
fmt.Printf(" extracted left: %v\n", node)
}
var newLeftLink interface{}
if newLeftNode != nil {
newLeftLink, err = m.store(newLeftNode)
if err != nil {
return err
}
} else {
newLeftLink = nil
}
newNode.Key = append(newNode.Key, key)
newNode.Value = append(newNode.Value, node.Value[i])
newNode.Link[len(newNode.Link)-1] = newLeftLink
newNode.Link = append(newNode.Link, nil)
if len(newNode.Link) != len(newNode.Key)+1 {
panic("new node has wrong number of links")
}
start = i + 1
}
newRightNode := node.extract(start, len(node.Key))
if newRightNode != nil {
if m.debug {
fmt.Printf("extracted right:\n")
newRightNode.dump(ctx, m)
}
var newRightLink interface{}
newRightLink, err = m.store(newRightNode)
if err != nil {
return err
}
newNode.Link[len(newNode.Link)-1] = newRightLink
}
newNode.dirty = true
newNode.expected = nil
newNode.source = nil
newLink, err := m.store(&newNode)
if err != nil {
return err
}
m.root = newLink
m.height++
m.shrinkBelowSize = m.growAfterSize
m.growAfterSize *= uint64(m.branchFactor)
return nil
}
func (node *mastNode) canGrow(currentHeight uint8, keyLayer func(interface{}, uint) (uint8, error), branchFactor uint) (bool, error) {
for _, key := range node.Key {
layer, err := keyLayer(key, branchFactor)
if err != nil {
return false, fmt.Errorf("layer: %w", err)
}
if layer > currentHeight {
return true, nil
}
}
return false, nil
}
func (m *Mast) shrink(ctx context.Context) error {
var err error
if m.debug {
fmt.Printf("SHRINKING\n")
fmt.Printf("size=%d height=%d branchFactor=%d\n", m.size, m.height, m.branchFactor)
m.dump(ctx)
}
if m.height == 0 {
return fmt.Errorf("tree is too short to shrink")
}
if m.root == nil {
if m.height != 0 {
return fmt.Errorf("tree with empty root but height %d, size %d", m.height, m.size)
}
return nil
}
node, err := m.load(ctx, m.root)
if err != nil {
return fmt.Errorf("load root: %w", err)
}
newNode := mastNode{
Node: Node{
Key: make([]interface{}, 0, m.branchFactor),
Value: make([]interface{}, 0, m.branchFactor),
Link: make([]interface{}, 0, m.branchFactor+1),
},
dirty: true,
}
for i := range node.Link {
if node.Link[i] != nil {
child, err := m.load(ctx, node.Link[i])
if err != nil {
return fmt.Errorf("load child: %w", err)
}
newNode.Key = append(newNode.Key, child.Key...)
newNode.Value = append(newNode.Value, child.Value...)
newNode.Link = append(newNode.Link, child.Link...)
validateNode(ctx, &newNode, m)
} else {
newNode.Link = append(newNode.Link, nil)
}
if i < len(node.Key) {
newNode.Key = append(newNode.Key, node.Key[i])
newNode.Value = append(newNode.Value, node.Value[i])
}
}
validateNode(ctx, &newNode, m)
if !newNode.isEmpty() {
newLink, err := m.store(&newNode)
if err != nil {
return err
}
m.root = newLink
} else {
m.root = nil
}
m.height--
if m.debug {
fmt.Printf("after shrink:\n")
fmt.Printf("size=%d height=%d branchFactor=%d\n", m.size, m.height, m.branchFactor)
m.dump(ctx)
}
if m.shrinkBelowSize > 1 {
m.shrinkBelowSize /= uint64(m.branchFactor)
m.growAfterSize /= uint64(m.branchFactor)
}
return nil
}
func (node *mastNode) dump(ctx context.Context, mast *Mast) {
str, err := node.string(ctx, " ", mast)
if err != nil {
panic(err)
}
fmt.Printf("%s", str)
}
func (node *mastNode) string(ctx context.Context, indent string, mast *Mast) (string, error) {
res := ""
for i := range node.Link {
var label string
if i >= len(node.Key) {
label = ">"
} else {
label = fmt.Sprintf("%v: %v", node.Key[i], node.Value[i])
}
linkStr := ""
if ls, ok := node.Link[i].(string); ok {
linkStr = fmt.Sprintf(" link=%v", ls)
}
res += fmt.Sprintf("%s%s%s {", indent, label, linkStr)
if node.Link[i] == nil {
res += "}\n"
continue
}
child, err := mast.load(ctx, node.Link[i])
if err != nil {
return "", err
}
res += "\n"
childstr, err := child.string(ctx, indent+" ", mast)
if err != nil {
return "", err
}
res += childstr
res += indent + "}\n"
}
return res, nil
}
func (m *Mast) dump(ctx context.Context) {
if m.root == nil {
fmt.Printf("NIL\n")
return
}
node, err := m.load(ctx, m.root)
if err != nil {
panic(err)
}
str, err := node.string(ctx, " ", m)
if err != nil {
panic(err)
}
fmt.Printf("{\n%s}\n", str)
}
func (node *mastNode) iter(ctx context.Context, f func(interface{}, interface{}) error, mast *Mast) error {
if mast.debug {
fmt.Printf("starting iter at node with keys: %v\n", node.Key)
}
for i, link := range node.Link {
if link != nil {
child, err := mast.load(ctx, link)
if err != nil {
return err
}
err = child.iter(ctx, f, mast)
if err != nil {
return err
}
}
if i < len(node.Key) {
err := f(node.Key[i], node.Value[i])
if err != nil {
return err
}
}
}
return nil
}
// seekIter first seeks to idx key, and then starts the iteration
func (node *mastNode) seekIter(ctx context.Context, idx int, f func(interface{}, interface{}) error, m *Mast) error {
if idx >= len(node.Key) {
return nil
}
err := f(node.Key[idx], node.Value[idx])
if err != nil {
return err
}
for i := idx + 1; i < len(node.Link); i++ {
link := node.Link[i]
if link != nil {
child, err := m.load(ctx, link)
if err != nil {
return err
}
err = child.iter(ctx, f, m)
if err != nil {
return err
}
}
if i < len(node.Key) {
err := f(node.Key[i], node.Value[i])
if err != nil {
return err
}
}
}
return nil
}
func validateNode(ctx context.Context, node *mastNode, mast *Mast) {
if debugMutation && node.expected != nil {
if !reflect.DeepEqual(node.expected.Key, node.Key) {
fmt.Printf("expected node %v\n", node.expected)
fmt.Printf("found node %v\n", node)
panic("nodes differ in keys")
}
if !reflect.DeepEqual(node.expected.Value, node.Value) {
fmt.Printf("expected node %v\n", node.expected)
fmt.Printf("found node %v\n", node)
panic("nodes differ in values")
}
}
for i := 0; i < len(node.Key)-1; i++ {
cmp, err := mast.keyOrder(node.Key[0], node.Key[1])
if err != nil {
panic(err)
}
if cmp >= 0 {
panic(fmt.Sprintf("sweet merciful crap! %v >= %v!", node.Key[0], node.Key[1]))
}
}
if len(node.Link) != len(node.Key)+1 {
fmt.Println("DANGIT! {")
node.dump(ctx, mast)
fmt.Println("}")
panic(fmt.Sprintf("node %p has %d links but %d keys", node, len(node.Link), len(node.Key)))
}
if len(node.Link) != len(node.Value)+1 {
fmt.Println("DANGIT! {")
node.dump(ctx, mast)
fmt.Println("}")
panic(fmt.Sprintf("node %p has %d links but %d values", node, len(node.Link), len(node.Value)))
}
}
func (m *Mast) mergeNodes(ctx context.Context, leftLink, rightLink interface{}) (interface{}, error) {
if leftLink == nil {
return rightLink, nil
}
if rightLink == nil {
return leftLink, nil
}
left, err := m.load(ctx, leftLink)
if err != nil {
return nil, fmt.Errorf("load left: %w", err)
}
right, err := m.load(ctx, rightLink)
if err != nil {
return nil, fmt.Errorf("load right: %w", err)
}
combined := &mastNode{
Node: Node{
Key: make([]interface{}, 0, m.branchFactor),
Value: make([]interface{}, 0, m.branchFactor),
Link: make([]interface{}, 0, m.branchFactor+1),
},
dirty: true,
}
combined.Key = append(combined.Key, left.Key...)
combined.Key = append(combined.Key, right.Key...)
combined.Value = append(combined.Value, left.Value...)
combined.Value = append(combined.Value, right.Value...)
combined.Link = append(combined.Link, left.Link[0:len(left.Link)-1]...)
combined.Link = append(combined.Link, nil)
combined.Link = append(combined.Link, right.Link[1:]...)
var mergedLink interface{}
mergedLink, err = m.mergeNodes(ctx, left.Link[len(left.Link)-1], right.Link[0])
if err != nil {
return nil, fmt.Errorf("merge: %w", err)
}
combined.Link[len(left.Link)-1] = mergedLink
var combinedLink interface{}
combinedLink, err = m.store(combined)
if err != nil {
return nil, fmt.Errorf("store: %w", err)
}
return combinedLink, nil
}
func (node *mastNode) xcopy() *mastNode {
newNode := mastNode{
Node{
make([]interface{}, 0, cap(node.Key)),
make([]interface{}, 0, cap(node.Value)),
make([]interface{}, 0, cap(node.Link)),
},
node.dirty, node.shared, nil, nil,
}
newNode.Key = append(newNode.Key, node.Key...)
newNode.Value = append(newNode.Value, node.Value...)
newNode.Link = append(newNode.Link, node.Link...)
return &newNode
}
func (m *Mast) checkRoot(ctx context.Context) error {
node, err := m.load(ctx, m.root)
if err != nil {
return fmt.Errorf("load: %w", err)
}
if len(node.Key) != len(node.Value) ||
len(node.Link) != len(node.Key)+1 {
return fmt.Errorf("impromperly-formatted node")
}
var last interface{}
for i, key := range node.Key {
if i > 0 {
cmp, err := m.keyOrder(last, key)
if err != nil {
return fmt.Errorf("key order: %w", err)
}
if cmp >= 0 {
return fmt.Errorf("inconsistent key order function; ensure using same function as source")
}
}
layer, err := m.keyLayer(key, m.branchFactor)
if err != nil {
return fmt.Errorf("key layer: %w", err)
}
if layer < m.height {
return fmt.Errorf("inconsistent key layers; ensure using same function as source")
}
last = key
}
return nil
}
func (node *mastNode) ToMut(ctx context.Context, mast *Mast) *mastNode {
validateNode(ctx, node, mast)
if !node.shared {
return node
}
newNode := node.xcopy()
newNode.expected = node
newNode.shared = false
return newNode
}
func (node *mastNode) ToShared() (*mastNode, error) {
if node.shared {
return node, nil
}
node = node.xcopy()
var err error
for i, link := range node.Link {
switch l := link.(type) {
case *mastNode:
if l.shared {
continue
}
node.Link[i], err = l.ToShared()
if err != nil {
return nil, err
}
case string:
case nil:
default:
return nil, fmt.Errorf("unhandled link type %T", l)
}
}
return node, nil
}
func (node *mastNode) Dirty() {
node.expected = nil
node.source = nil
}
// BranchFactor returns the ideal number of entries that are stored per node.
func (m *Mast) BranchFactor() uint {
return m.branchFactor
}