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project.json
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{
"project": {
"analyst": "",
"annotation": "hg19",
"batchsize": "20",
"binset": "standard-bin",
"cluster": "cluster_medium.json",
"contrasts": {
"rcontrasts": [
"a",
"b"
],
"rgroups": [
"a",
"a",
"b",
"b"
],
"rsamps": [
"SRR326279.R1",
"SRR326280.R1",
"SRR326281.R1",
"SRR326282.R1"
]
},
"custom": [],
"datapath": "/data/CCBR/dev/PipelineTestSeqs/mirseq",
"description": "Enter CCBR project Description and Notes here.\n",
"efiletype": "fastq",
"filetype": "fastq.gz",
"flowcellid": "",
"id": "",
"organism": "",
"pairs": {},
"pfamily": "mirseq",
"pi": "",
"pipeline": "mirseq",
"platform": "Illumina",
"poc": "",
"rgid": {
"SRR326279": {
"rgcn": "na",
"rglb": "na",
"rgpl": "ILLUMINA",
"rgpu": "na",
"rgsm": "SRR326279"
},
"SRR326280": {
"rgcn": "na",
"rglb": "na",
"rgpl": "ILLUMINA",
"rgpu": "na",
"rgsm": "SRR326280"
},
"SRR326281": {
"rgcn": "na",
"rglb": "na",
"rgpl": "ILLUMINA",
"rgpu": "na",
"rgsm": "SRR326281"
},
"SRR326282": {
"rgcn": "na",
"rglb": "na",
"rgpl": "ILLUMINA",
"rgpu": "na",
"rgsm": "SRR326282"
}
},
"samples": {
"na": "na"
},
"smparams": [],
"technique": "",
"units": {
"SRR326279": "SRR326279",
"SRR326280": "SRR326280",
"SRR326281": "SRR326281",
"SRR326282": "SRR326282"
},
"username": "",
"version": "1.0",
"workpath": "/scratch/dwheeler/test5"
}
}