This directory contains the supplementary material for Method 1: Competing endogenous RNAs in CRC and Method 2: A biological and clinical feature analysis to predict recurrence and patient survival in CRC.
Each folder contains data regarding one of the developed methods
Files related to Method 1: Competing endogenous RNAs in CRC.
metadata = related TCGA metada files to be downloaded
manifest = related TCGA expression files to be downloaded
The folders inside method1/supplementary_material are divided per anatomical site where:
cerna = cerna related results
de = de analysis related results
enrichment = functional analysis results
survival = survival analysis results
Files related to Method 2: A biological and clinical feature analysis to predict recurrence and patient survival in CRC
input = files for each group used to train the model
models = pickled trained models
Please contact the owner if you use any script or data.