From bb958f8d5872c87807488bf83dd85355af04488d Mon Sep 17 00:00:00 2001
From: "@jmmshn" <jmmshn@gmail.com>
Date: Sun, 18 Dec 2022 22:42:50 -0800
Subject: [PATCH] actions

---
 .github/workflows/python-publish.yml   |  4 +-
 .github/workflows/testing.yml          | 55 +++++++++++---------------
 .github/workflows/update-precommit.yml |  2 +-
 3 files changed, 27 insertions(+), 34 deletions(-)

diff --git a/.github/workflows/python-publish.yml b/.github/workflows/python-publish.yml
index d556075c..52ff94ed 100644
--- a/.github/workflows/python-publish.yml
+++ b/.github/workflows/python-publish.yml
@@ -15,7 +15,7 @@ jobs:
     steps:
     - uses: actions/checkout@v3
     - name: Set up Python
-      uses: actions/setup-python@v3
+      uses: actions/setup-python@v4
       with:
         python-version: '3.x'
     - name: Install dependencies
@@ -41,7 +41,7 @@ jobs:
       - name: Install pandoc
         run: sudo apt-get install pandoc
 
-      - uses: actions/setup-python@v3
+      - uses: actions/setup-python@v4
         with:
           python-version: '3.10'
           cache: pip
diff --git a/.github/workflows/testing.yml b/.github/workflows/testing.yml
index f925b3cd..1ce1bf9d 100644
--- a/.github/workflows/testing.yml
+++ b/.github/workflows/testing.yml
@@ -4,9 +4,8 @@ on:
   push:
     branches:
       - main
-
     tags:
-      - 'v*'
+      - "v*"
 
   pull_request:
     branches:
@@ -18,10 +17,9 @@ jobs:
 
     steps:
       - uses: actions/checkout@v3
-
-      - uses: actions/setup-python@v3
+      - uses: actions/setup-python@v4
         with:
-          python-version: '3.10'
+          python-version: "3.10"
           cache: pip
           cache-dependency-path: pyproject.toml
 
@@ -32,7 +30,6 @@ jobs:
           pip install -e .[dev]
           pre-commit install
 
-
       - name: Lint
         run: |
           pre-commit run --all-files --show-diff-on-failure
@@ -41,34 +38,34 @@ jobs:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python-version: [ '3.8', '3.9', '3.10' ]
+        python-version: ["3.8", "3.9", "3.10"]
 
     env:
       PMG_MAPI_KEY: ${{ secrets.PMG_MAPI_KEY }}
 
     steps:
-    - uses: actions/checkout@v3
+      - uses: actions/checkout@v3
 
-    - uses: actions/setup-python@v3
-      with:
-        python-version:  ${{ matrix.python-version }}
-        cache: pip
-        cache-dependency-path: pyproject.toml
+      - uses: actions/setup-python@v4
+        with:
+          python-version: ${{ matrix.python-version }}
+          cache: pip
+          cache-dependency-path: pyproject.toml
 
-    - name: Install dependencies
-      run: |
-        python -m pip install --upgrade pip
-        pip install -e .[strict]
-        pip install -e .[tests]
+      - name: Install dependencies
+        run: |
+          python -m pip install --upgrade pip
+          pip install -e .[strict]
+          pip install -e .[tests]
 
-    - name: Test
-      run: pytest --cov=pymatgen --cov-report=xml
+      - name: Test
+        run: pytest --cov=pymatgen --cov-report=xml
 
-    - uses: codecov/codecov-action@v1
-      if: matrix.python-version == 3.10
-      with:
-        token: ${{ secrets.CODECOV_TOKEN }}
-        file: ./coverage.xml
+      - uses: codecov/codecov-action@v1
+        if: matrix.python-version == 3.10
+        with:
+          token: ${{ secrets.CODECOV_TOKEN }}
+          file: ./coverage.xml
 
   docs:
     runs-on: ubuntu-latest
@@ -82,9 +79,9 @@ jobs:
       - name: Install pandoc
         run: sudo apt-get install pandoc
 
-      - uses: actions/setup-python@v3
+      - uses: actions/setup-python@v4
         with:
-          python-version: '3.10'
+          python-version: "3.10"
           cache: pip
           cache-dependency-path: pyproject.toml
 
@@ -94,7 +91,3 @@ jobs:
           pip install -e .[docs]
       - name: Build
         run: jupyter-book build --path-output docs docs/source
-
-      - name: Test Jupyter Notebooks
-        run: |
-          pytest --nbmake --nbmake-kernel=python3 tutorials
diff --git a/.github/workflows/update-precommit.yml b/.github/workflows/update-precommit.yml
index 1f32dd2f..265132a9 100644
--- a/.github/workflows/update-precommit.yml
+++ b/.github/workflows/update-precommit.yml
@@ -12,7 +12,7 @@ jobs:
       - uses: actions/checkout@v3
 
       - name: Set up Python
-      - uses: actions/setup-python@v3
+      - uses: actions/setup-python@v4
         with:
           python-version:  ${{ 3.10 }}
           cache: pip