diff --git a/netam/dcsm.py b/netam/dcsm.py index 5d61bba4..7f4676b2 100644 --- a/netam/dcsm.py +++ b/netam/dcsm.py @@ -298,6 +298,7 @@ def predictions_of_batch(self, batch): So, in cases when the sum of the children is > 1, we don't give a normalized probability distribution, but that's OK for loss calculation because we are doing softmax. + TODO think about this more. Note that make all ambiguous codons nan in the output, ensuring that they must get properly masked downstream.