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Errors with missing specific .dat files while running the jupyter notebooks #20

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jimboH opened this issue Mar 18, 2020 · 1 comment

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@jimboH
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jimboH commented Mar 18, 2020

Hi! I tried to run notebooks in ca1/NeuroML2/notebooks/ and got errors with missing some specific .dat files. For example, in the Visualize_ChannelDynamics notebook, 'Nav.m.inf.lems.dat' was missing when I tried to run plot_inf(["Nav"]). I am not sure if the .dat file was not included in this GitHub repo, or if there's anything I misunderstood?

@andrisecker
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Hi there, you have to run NeuroML2/channels/analyse_nmlchans.sh first.
That'll save the mentioned .dat files (and create other summaries as well).

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