From af8322bfe9ef0723a3143d741d951a2462d000c0 Mon Sep 17 00:00:00 2001 From: Silas Kieser Date: Fri, 12 May 2023 15:51:24 +0200 Subject: [PATCH] gtdb v8 (#648) --- workflow/envs/gtdbtk.yaml | 2 +- workflow/rules/download.smk | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/workflow/envs/gtdbtk.yaml b/workflow/envs/gtdbtk.yaml index 6205e731..5a8f5c00 100644 --- a/workflow/envs/gtdbtk.yaml +++ b/workflow/envs/gtdbtk.yaml @@ -3,4 +3,4 @@ channels: - bioconda - defaults dependencies: -- gtdbtk =2.2 +- gtdbtk =2.3 diff --git a/workflow/rules/download.smk b/workflow/rules/download.smk index 6f7bf5c8..98e348e6 100644 --- a/workflow/rules/download.smk +++ b/workflow/rules/download.smk @@ -5,7 +5,7 @@ import os ZENODO_ARCHIVE = "1134890" EGGNOG_VERSION = "5" -GTDB_DATA_URL = "https://data.gtdb.ecogenomic.org/releases/release207/207.0/auxillary_files/gtdbtk_r207_v2_data.tar.gz" +GTDB_DATA_URL = "https://data.gtdb.ecogenomic.org/releases/release214/214.0/auxillary_files/gtdbtk_r214_data.tar.gz" def md5(fname):