diff --git a/.github/workflows/pre-commit.yml b/.github/workflows/pre-commit.yml
index 8c72a709cf330..bf9460151ec1b 100644
--- a/.github/workflows/pre-commit.yml
+++ b/.github/workflows/pre-commit.yml
@@ -15,3 +15,5 @@ jobs:
         python-version: "3.12"
     - run: echo "::add-matcher::.github/workflows/matchers/actionlint.json"
     - uses: pre-commit/action@2c7b3805fd2a0fd8c1884dcaebf91fc102a13ecd # v3.0.1
+      with:
+        extra_args: --hook-stage manual
diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index 8ea0f37885d9f..47eddb345edbd 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -1,3 +1,6 @@
+default_stages:
+  - pre-commit # Run locally
+  - manual # Run in CI
 repos:
 - repo: https://github.com/google/yapf
   rev: v0.32.0
@@ -33,30 +36,41 @@ repos:
     files: docs/.*
 - repo: local
   hooks:
+  - id: mypy-local
+    name: Run mypy for local Python installation
+    entry: tools/mypy.sh
+    language: python
+    types: [python]
+    additional_dependencies: &mypy_deps [mypy==1.11.1, types-setuptools, types-PyYAML, types-requests]
+    stages: [pre-commit] # Don't run in CI
   - id: mypy-3.9 # TODO: Use https://github.com/pre-commit/mirrors-mypy when mypy setup is less awkward
     name: Run mypy for Python 3.9
     entry: tools/mypy.sh 1 "3.9"
     language: python
     types: [python]
-    additional_dependencies: &mypy_deps [mypy==1.11.1, types-setuptools, types-PyYAML, types-requests]
+    additional_dependencies: *mypy_deps
+    stages: [manual] # Only run in CI
   - id: mypy-3.10 # TODO: Use https://github.com/pre-commit/mirrors-mypy when mypy setup is less awkward
     name: Run mypy for Python 3.10
     entry: tools/mypy.sh 1 "3.10"
     language: python
     types: [python]
     additional_dependencies: *mypy_deps
+    stages: [manual] # Only run in CI
   - id: mypy-3.11 # TODO: Use https://github.com/pre-commit/mirrors-mypy when mypy setup is less awkward
     name: Run mypy for Python 3.11
     entry: tools/mypy.sh 1 "3.11"
     language: python
     types: [python]
     additional_dependencies: *mypy_deps
+    stages: [manual] # Only run in CI
   - id: mypy-3.12 # TODO: Use https://github.com/pre-commit/mirrors-mypy when mypy setup is less awkward
     name: Run mypy for Python 3.12
     entry: tools/mypy.sh 1 "3.12"
     language: python
     types: [python]
     additional_dependencies: *mypy_deps
+    stages: [manual] # Only run in CI
   - id: shellcheck
     name: Lint shell scripts
     entry: tools/shellcheck.sh