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NAMESPACE
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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(miaDash)
importFrom(S4Vectors,DataFrame)
importFrom(S4Vectors,isEmpty)
importFrom(SingleCellExperiment,reducedDims)
importFrom(SummarizedExperiment,assay)
importFrom(SummarizedExperiment,assayNames)
importFrom(SummarizedExperiment,colData)
importFrom(SummarizedExperiment,rowData)
importFrom(TreeSummarizedExperiment,TreeSummarizedExperiment)
importFrom(TreeSummarizedExperiment,colLinks)
importFrom(TreeSummarizedExperiment,rowLinks)
importFrom(TreeSummarizedExperiment,rowTree)
importFrom(ape,read.tree)
importFrom(biomformat,read_biom)
importFrom(htmltools,HTML)
importFrom(htmltools,br)
importFrom(htmltools,div)
importFrom(htmltools,tagList)
importFrom(htmltools,tags)
importFrom(iSEE,ColumnDataTable)
importFrom(iSEE,ComplexHeatmapPlot)
importFrom(iSEE,ReducedDimensionPlot)
importFrom(iSEE,RowDataTable)
importFrom(iSEE,iSEE)
importFrom(iSEEtree,AbundanceDensityPlot)
importFrom(iSEEtree,AbundancePlot)
importFrom(iSEEtree,ColumnTreePlot)
importFrom(iSEEtree,LoadingPlot)
importFrom(iSEEtree,RDAPlot)
importFrom(iSEEtree,RowTreePlot)
importFrom(methods,is)
importFrom(mia,addAlpha)
importFrom(mia,agglomerateByRank)
importFrom(mia,convertFromBIOM)
importFrom(mia,getDissimilarity)
importFrom(mia,importMetaPhlAn)
importFrom(mia,runNMDS)
importFrom(mia,runRDA)
importFrom(mia,subsetByPrevalent)
importFrom(mia,subsetByRare)
importFrom(mia,taxonomyRanks)
importFrom(mia,transformAssay)
importFrom(rintrojs,introjs)
importFrom(scater,runMDS)
importFrom(scater,runPCA)
importFrom(shiny,actionButton)
importFrom(shiny,addResourcePath)
importFrom(shiny,checkboxInput)
importFrom(shiny,conditionalPanel)
importFrom(shiny,downloadButton)
importFrom(shiny,downloadHandler)
importFrom(shiny,fileInput)
importFrom(shiny,fluidRow)
importFrom(shiny,isolate)
importFrom(shiny,modalDialog)
importFrom(shiny,numericInput)
importFrom(shiny,observe)
importFrom(shiny,observeEvent)
importFrom(shiny,radioButtons)
importFrom(shiny,reactiveValues)
importFrom(shiny,renderPrint)
importFrom(shiny,renderUI)
importFrom(shiny,req)
importFrom(shiny,selectInput)
importFrom(shiny,showModal)
importFrom(shiny,showNotification)
importFrom(shiny,sliderInput)
importFrom(shiny,tabPanel)
importFrom(shiny,tabsetPanel)
importFrom(shiny,textInput)
importFrom(shiny,updateNumericInput)
importFrom(shiny,updateSelectInput)
importFrom(shiny,verbatimTextOutput)
importFrom(shiny,wellPanel)
importFrom(shinydashboard,box)
importFrom(shinydashboard,dashboardBody)
importFrom(shinydashboard,dashboardHeader)
importFrom(shinydashboard,dashboardPage)
importFrom(shinydashboard,dashboardSidebar)
importFrom(shinyjs,disable)
importFrom(shinyjs,enable)
importFrom(stats,as.formula)
importFrom(utils,data)
importFrom(utils,packageVersion)
importFrom(utils,read.csv)
importFrom(vegan,vegdist)