Add license to .cpp files and prototype code. Consolidate numerical t…

…ests into validation.
nd-nuclear-theory · Feb 16, 2021 · 0ac9dc0 · 0ac9dc0
1 parent 4d4723a
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diff --git a/libraries/lgi/lgi.cpp b/libraries/lgi/lgi.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame and TRIUMF
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 #include "lgi/lgi.h"
 

diff --git a/libraries/lgi/lgi_solver.cpp b/libraries/lgi/lgi_solver.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 #include <fstream>
 #include <iostream>

diff --git a/libraries/lgi/lgi_unit_tensors.cpp b/libraries/lgi/lgi_unit_tensors.cpp
@@ -3,7 +3,8 @@
 
   Anna E. McCoy
   TRIUMF
-
+  
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 #include "lgi/lgi_unit_tensors.h"
 #include <omp.h>

diff --git a/libraries/lgi/null_solver.cpp b/libraries/lgi/null_solver.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame and TRIUMF
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 
 #include "lgi/null_solver.h"

diff --git a/libraries/lsu3shell/lsu3shell_basis.cpp b/libraries/lsu3shell/lsu3shell_basis.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame and TRIUMF
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 
 #include "lsu3shell/lsu3shell_basis.h"

diff --git a/libraries/lsu3shell/lsu3shell_operator.cpp b/libraries/lsu3shell/lsu3shell_operator.cpp
@@ -3,7 +3,8 @@
 
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame
-
+  
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 
 #include "lsu3shell/lsu3shell_operator.h"

diff --git a/libraries/lsu3shell/lsu3shell_rme.cpp b/libraries/lsu3shell/lsu3shell_rme.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame and TRIUMF
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 #include "lsu3shell/lsu3shell_rme.h"
 

diff --git a/libraries/moshinsky/moshinsky_xform.cpp b/libraries/moshinsky/moshinsky_xform.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 #include <cmath>
 #include "fmt/format.h"

diff --git a/libraries/moshinsky/relative_cm_xform.cpp b/libraries/moshinsky/relative_cm_xform.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 
 #include <fstream>

diff --git a/libraries/moshinsky/shell_comparison.cpp b/libraries/moshinsky/shell_comparison.cpp
@@ -1,6 +1,9 @@
 /****************************************************************
   shell_comparison.cpp
 
+  Branches Q operator constructed from relative Sp(3,R) generators
+  to NLSJT basis for comparison with shell relative file
+
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame
 

diff --git a/libraries/sp3rlib/sp3r.cpp b/libraries/sp3rlib/sp3r.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 
 #include <cassert>

diff --git a/libraries/sp3rlib/sp3r_operator.cpp b/libraries/sp3rlib/sp3r_operator.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy
   University of Notre Dame
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 #include "sp3rlib/sp3r_operator.h"
 

diff --git a/libraries/sp3rlib/sp3rcoef.cpp b/libraries/sp3rlib/sp3rcoef.cpp
@@ -3,6 +3,8 @@
 
   Anna E. McCoy
   University of Notre Dame
+
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 
 #include <cassert>

diff --git a/libraries/sp3rlib/u3.cpp b/libraries/sp3rlib/u3.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 
 #include "sp3rlib/u3.h"

diff --git a/libraries/sp3rlib/u3coef.cpp b/libraries/sp3rlib/u3coef.cpp
@@ -6,8 +6,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame
 
-  3/10/16 (aem,mac): Created based on prototype u3.py and 
-  T. Dytrych CSU3Master.
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 #include "sp3rlib/u3coef.h"
 

diff --git a/libraries/sp3rlib/u3coef.h b/libraries/sp3rlib/u3coef.h
@@ -11,6 +11,8 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame
 
+  SPDX-License-Identifier: MIT
+
   3/10/16 (aem,mac): Created based on prototype u3.py and T. Dytrych
     CSU3Master.
   10/17/16 (mac): Add comment on W.

diff --git a/libraries/sp3rlib/vcs.cpp b/libraries/sp3rlib/vcs.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy
   University of Notre Dame and TRIUMF
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 #include "sp3rlib/vcs.h"
 

diff --git a/libraries/spncci/computation_control.cpp b/libraries/spncci/computation_control.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame and TRIUMF
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 
 #include "spncci/computation_control.h"

diff --git a/libraries/spncci/decomposition.cpp b/libraries/spncci/decomposition.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame and TRIUMF
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 
 #include "spncci/decomposition.h"

diff --git a/libraries/spncci/eigenproblem.cpp b/libraries/spncci/eigenproblem.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 
 #include "spncci/eigenproblem.h"

diff --git a/libraries/spncci/explicit_construction.cpp b/libraries/spncci/explicit_construction.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 
 #include "spncci/explicit_construction.h"

diff --git a/libraries/spncci/hyperblocks_u3s.cpp b/libraries/spncci/hyperblocks_u3s.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy 
   TRIUMF
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 
 #include "spncci/hyperblocks_u3s.h"

diff --git a/libraries/spncci/io_control.cpp b/libraries/spncci/io_control.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 
 #include "spncci/io_control.h"

diff --git a/libraries/spncci/parameters.cpp b/libraries/spncci/parameters.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 
 #include "spncci/parameters.h"

diff --git a/libraries/spncci/recurrence.cpp b/libraries/spncci/recurrence.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy
   University of Notre Dame and TRIUMF
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 
 #include "spncci/recurrence.h"

diff --git a/libraries/spncci/results_output.cpp b/libraries/spncci/results_output.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame and TRIUMF
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 #include "spncci/results_output.h"
 

diff --git a/libraries/spncci/spncci_basis.cpp b/libraries/spncci/spncci_basis.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame and TRIUMF
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 
 #include "spncci/spncci_basis.h"

diff --git a/libraries/spncci/spncci_common.cpp b/libraries/spncci/spncci_common.cpp
@@ -4,6 +4,7 @@
   Mark A. Caprio
   University of Notre Dame
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 
 #include "spncci/spncci_common.h"

diff --git a/libraries/spncci/transform_basis.cpp b/libraries/spncci/transform_basis.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy
   TRIUMF
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 #include "spncci/transform_basis.h"
 

diff --git a/libraries/spncci/variance.cpp b/libraries/spncci/variance.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy
   TRIUMF
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 #include "spncci/variance.h"
 

diff --git a/libraries/spncci/vcs_cache.cpp b/libraries/spncci/vcs_cache.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame and TRIUMF
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 
 #include "spncci/vcs_cache.h"

diff --git a/libraries/u3shell/interaction_truncation.cpp b/libraries/u3shell/interaction_truncation.cpp
@@ -3,6 +3,8 @@
                                   
   Anna E. McCoy
   TRIUMF
+
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 #include "u3shell/interaction_truncation.h"
 #include "fmt/format.h"

diff --git a/libraries/u3shell/relative_branching.cpp b/libraries/u3shell/relative_branching.cpp
@@ -1,6 +1,10 @@
 /****************************************************************
   relative_branching.cpp
-  
+
+  Anna E. McCoy
+  TRIUMF
+
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 #include "u3shell/relative_branching.h"
 

diff --git a/libraries/u3shell/relative_operator.cpp b/libraries/u3shell/relative_operator.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 #include "u3shell/relative_operator.h"
 

diff --git a/libraries/u3shell/tensor_labels.cpp b/libraries/u3shell/tensor_labels.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 
 #include "u3shell/tensor_labels.h"

diff --git a/libraries/u3shell/two_body_branching.cpp b/libraries/u3shell/two_body_branching.cpp
@@ -3,6 +3,8 @@
 
   Anna E. McCoy
   University of Notre Dame
+
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 #include "u3shell/two_body_branching.h"
 #include "am/halfint.h"

diff --git a/libraries/u3shell/two_body_operator.cpp b/libraries/u3shell/two_body_operator.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 
 #include "u3shell/two_body_operator.h"

diff --git a/libraries/u3shell/u3spn_scheme.cpp b/libraries/u3shell/u3spn_scheme.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 
 #include "u3shell/u3spn_scheme.h"

diff --git a/libraries/u3shell/u3st_scheme.cpp b/libraries/u3shell/u3st_scheme.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 
 #include "u3shell/u3st_scheme.h"

diff --git a/libraries/u3shell/unit_tensor_expansion.cpp b/libraries/u3shell/unit_tensor_expansion.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 
 #include "u3shell/unit_tensor_expansion.h"

diff --git a/libraries/u3shell/unit_tensor_space_u3s.cpp b/libraries/u3shell/unit_tensor_space_u3s.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 
 #include "u3shell/unit_tensor_space_u3s.h"

diff --git a/libraries/u3shell/unu3.cpp b/libraries/u3shell/unu3.cpp
@@ -4,6 +4,8 @@
   Anna E. McCoy
   University of Notre Dame
 
+  SPDX-License-Identifier: MIT
+
   based heavily on lsu3shell CUNMASTER
 ****************************************************************/
 #include "u3shell/unu3.h"

diff --git a/libraries/u3shell/upcoupling.cpp b/libraries/u3shell/upcoupling.cpp
@@ -4,6 +4,7 @@
   Anna E. McCoy and Mark A. Caprio
   University of Notre Dame
 
+  SPDX-License-Identifier: MIT
 ****************************************************************/
 #include "u3shell/upcoupling.h"
 

diff --git a/misc/prototype/sp3rlib/coefficients.py b/misc/prototype/sp3rlib/coefficients.py
@@ -1,3 +1,10 @@
+##################################################################################
+#	Anna E. McCoy
+#	University of Notre Dame
+#
+#	SPDX-License-Identifier: MIT
+##################################################################################
+
 import math
 from u3states import *
 import so3

diff --git a/misc/prototype/sp3rlib/irreps.py b/misc/prototype/sp3rlib/irreps.py
@@ -1,6 +1,11 @@
 ##################################################################################################################################################
-##  Generating irreps corresponding to the different symmetries 
-##################################################################################################################################################
+#  Generating irreps corresponding to the different symmetries 
+#
+#	Anna E. McCoy
+#	University of Notre Dame
+#
+#	SPDX-License-Identifier: MIT
+##################################################################################
 
 import math
 import sys