From 60def09db7df0156932c4fb2120b8e50a40fcfbe Mon Sep 17 00:00:00 2001
From: Taylor Salo <tsalo006@fiu.edu>
Date: Sat, 6 Nov 2021 11:58:07 -0400
Subject: [PATCH] Add major classes to parent namespaces.

---
 nimare/annotate/__init__.py | 18 +++++++++++++++++-
 nimare/decode/__init__.py   | 30 +++++++++++++++++++++++++++++-
 nimare/meta/__init__.py     | 18 ++++++++++++++++++
 3 files changed, 64 insertions(+), 2 deletions(-)

diff --git a/nimare/annotate/__init__.py b/nimare/annotate/__init__.py
index 90872415b..3fe49a8de 100644
--- a/nimare/annotate/__init__.py
+++ b/nimare/annotate/__init__.py
@@ -1,5 +1,21 @@
 """Automated annotation tools."""
 
 from . import cogat, gclda, lda, text, utils
+from .cogat import CogAtLemmatizer, expand_counts, extract_cogat
+from .gclda import GCLDAModel
+from .lda import LDAModel
+from .text import generate_counts
 
-__all__ = ["cogat", "gclda", "lda", "text", "utils"]
+__all__ = [
+    "CogAtLemmatizer",
+    "expand_counts",
+    "extract_cogat",
+    "GCLDAModel",
+    "LDAModel",
+    "generate_counts",
+    "cogat",
+    "gclda",
+    "lda",
+    "text",
+    "utils",
+]
diff --git a/nimare/decode/__init__.py b/nimare/decode/__init__.py
index 97835530d..fc4e9e181 100755
--- a/nimare/decode/__init__.py
+++ b/nimare/decode/__init__.py
@@ -1,5 +1,33 @@
 """Functional decoding tools."""
 
 from . import continuous, discrete, encode
+from .continuous import (
+    CorrelationDecoder,
+    CorrelationDistributionDecoder,
+    gclda_decode_map,
+)
+from .discrete import (
+    BrainMapDecoder,
+    NeurosynthDecoder,
+    ROIAssociationDecoder,
+    brainmap_decode,
+    gclda_decode_roi,
+    neurosynth_decode,
+)
+from .encode import gclda_encode
 
-__all__ = ["continuous", "discrete", "encode"]
+__all__ = [
+    "CorrelationDecoder",
+    "CorrelationDistributionDecoder",
+    "gclda_decode_map",
+    "BrainMapDecoder",
+    "NeurosynthDecoder",
+    "ROIAssociationDecoder",
+    "brainmap_decode",
+    "gclda_decode_roi",
+    "neurosynth_decode",
+    "gclda_encode",
+    "continuous",
+    "discrete",
+    "encode",
+]
diff --git a/nimare/meta/__init__.py b/nimare/meta/__init__.py
index b4889ccae..a5a19f28a 100755
--- a/nimare/meta/__init__.py
+++ b/nimare/meta/__init__.py
@@ -2,6 +2,16 @@
 
 from . import ibma, kernel
 from .cbma import ALE, KDA, SCALE, ALESubtraction, MKDAChi2, MKDADensity, ale, mkda
+from .ibma import (
+    DerSimonianLaird,
+    Fishers,
+    Hedges,
+    PermutedOLS,
+    SampleSizeBasedLikelihood,
+    Stouffers,
+    VarianceBasedLikelihood,
+    WeightedLeastSquares,
+)
 from .kernel import ALEKernel, KDAKernel, MKDAKernel
 
 __all__ = [
@@ -11,6 +21,14 @@
     "MKDADensity",
     "MKDAChi2",
     "KDA",
+    "DerSimonianLaird",
+    "Fishers",
+    "Hedges",
+    "PermutedOLS",
+    "SampleSizeBasedLikelihood",
+    "Stouffers",
+    "VarianceBasedLikelihood",
+    "WeightedLeastSquares",
     "MKDAKernel",
     "ALEKernel",
     "KDAKernel",