Fargate complains when memory is exactly the minimum required.

[SPPearce]

Bug report

Fargate complains when the memory is exactly the minimum required.

Expected behavior and actual behavior

Using AWS Fargate, a spurious warning is produced when the minimum memory is provided.

Steps to reproduce the problem

Run:

nextflow run nextflow-io/hello -process.memory "2.GB" \
-bucket-dir '<BUCKET>' 

This will give warnings:

Program output

WARN: Process 'sayHello (4)' memory requirement of 2 GB is below the minimum allowed by Fargate of 2 GB
WARN: Process 'sayHello (1)' memory requirement of 2 GB is below the minimum allowed by Fargate of 2 GB
WARN: Process 'sayHello (3)' memory requirement of 2 GB is below the minimum allowed by Fargate of 2 GB
WARN: Process 'sayHello (2)' memory requirement of 2 GB is below the minimum allowed by Fargate of 2 GB

Environment

• Nextflow version: 24.10.0

[SPPearce]

It looks like this line:

nextflow/plugins/nf-amazon/src/main/nextflow/cloud/aws/batch/AwsBatchTaskHandler.groovy

Line 934 in 549e790

if( mega <=slot.min ) {

        if( mega <=slot.min ) {
            log.warn "Process '${task.lazyName()}' memory requirement of ${mem} is below the minimum allowed by Fargate of ${MemoryUnit.of(mega+'MB')}"

should be

        if( mega <slot.min ) {

[pditommaso]

Well spotted! willing to create a PR for it?

[SPPearce]

Well spotted! willing to create a PR for it?

Done.