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Allow affy array processing #47

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pinin4fjords opened this issue Jan 20, 2023 · 0 comments · Fixed by #60
Closed

Allow affy array processing #47

pinin4fjords opened this issue Jan 20, 2023 · 0 comments · Fixed by #60
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enhancement New feature or request
Milestone
1.1.0

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@pinin4fjords
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Description of feature

Add array processing via two new modules:

  • affy/readaffy (or possibly affy/justrma) - CEL to expression matrix
  • QC?
  • limma/differential - differential analysis analagous to DESeq2

I'm still weighing up if it makes sense to have a separate array workflow.
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enhancement New feature or request
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Milestone
1.1.0
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@pinin4fjords