From 1ee14e9a98608a87391d6b0739950fc85efcff4b Mon Sep 17 00:00:00 2001
From: Mahesh Binzer-Panchal <mahesh.binzer-panchal@nbis.se>
Date: Thu, 12 Aug 2021 11:44:03 +0200
Subject: [PATCH] remove software var

---
 .../pipeline-template/modules/nf-core/modules/fastqc/main.nf | 5 ++---
 .../modules/nf-core/modules/multiqc/main.nf                  | 3 +--
 2 files changed, 3 insertions(+), 5 deletions(-)

diff --git a/nf_core/pipeline-template/modules/nf-core/modules/fastqc/main.nf b/nf_core/pipeline-template/modules/nf-core/modules/fastqc/main.nf
index 8becdcb48d..26eb12cdad 100644
--- a/nf_core/pipeline-template/modules/nf-core/modules/fastqc/main.nf
+++ b/nf_core/pipeline-template/modules/nf-core/modules/fastqc/main.nf
@@ -28,7 +28,6 @@ process FASTQC {
 
     script:
     // Add soft-links to original FastQs for consistent naming in pipeline
-    def software = getSoftwareName(task.process)
     def prefix   = options.suffix ? "${meta.id}${options.suffix}" : "${meta.id}"
     if (meta.single_end) {
         """
@@ -37,7 +36,7 @@ process FASTQC {
 
         cat <<-END_VERSIONS > versions.yml
         ${getProcessName(task.process)}:
-            $software: \$(fastqc --version | sed -e "s/FastQC v//g")
+            fastqc: \$(fastqc --version | sed -e "s/FastQC v//g")
         END_VERSIONS
         """
     } else {
@@ -48,7 +47,7 @@ process FASTQC {
 
         cat <<-END_VERSIONS > versions.yml
         ${getProcessName(task.process)}:
-            $software: \$(fastqc --version | sed -e "s/FastQC v//g")
+            fastqc: \$(fastqc --version | sed -e "s/FastQC v//g")
         END_VERSIONS
         """
     }
diff --git a/nf_core/pipeline-template/modules/nf-core/modules/multiqc/main.nf b/nf_core/pipeline-template/modules/nf-core/modules/multiqc/main.nf
index a9ba0fe3a2..65b1e64bb7 100644
--- a/nf_core/pipeline-template/modules/nf-core/modules/multiqc/main.nf
+++ b/nf_core/pipeline-template/modules/nf-core/modules/multiqc/main.nf
@@ -27,13 +27,12 @@ process MULTIQC {
     path "versions.yml"        , emit: version
 
     script:
-    def software = getSoftwareName(task.process)
     """
     multiqc -f $options.args .
 
     cat <<-END_VERSIONS > versions.yml
     ${getProcessName(task.process)}:
-        $software: \$(multiqc --version | sed -e "s/multiqc, version //g")
+        multiqc: \$(multiqc --version | sed -e "s/multiqc, version //g")
     END_VERSIONS
     """
 }