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| <Project Sdk="Microsoft.NET.Sdk"> | ||
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| <PropertyGroup> | ||
| <TargetFramework>net6.0</TargetFramework> | ||
| <GenerateDocumentationFile>true</GenerateDocumentationFile> | ||
| </PropertyGroup> | ||
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| <ItemGroup> | ||
| <Compile Include="ValidationResult.fs" /> | ||
| <Compile Include="JsonSchemaValidation.fs" /> | ||
| </ItemGroup> | ||
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| <ItemGroup> | ||
| <PackageReference Include="NJsonSchema" Version="10.8.0" /> | ||
| </ItemGroup> | ||
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| <ItemGroup> | ||
| <ProjectReference Include="..\ISADotNet\ISADotNet.fsproj" /> | ||
| </ItemGroup> | ||
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| </Project> |
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| namespace ISADotNet.Validation | ||
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| module JSchema = | ||
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| let validate (schemaURL : string) (objectString : string) = | ||
| let settings = NJsonSchema.Validation.JsonSchemaValidatorSettings() | ||
| let schema = NJsonSchema.JsonSchema.FromUrlAsync(schemaURL) | ||
| let r = schema.Result.Validate(objectString,settings) | ||
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| ValidationResult.OfJSchemaOutput(r |> Seq.length |> (=) 0,r |> Seq.map (fun err -> err.ToString()) |> Seq.toArray) | ||
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| let validateAssay (assayString : string) = | ||
| let assayUrl = "https://raw.githubusercontent.com/HLWeil/isa-specs/master/source/_static/isajson/assay_schema.json" | ||
| validate assayUrl assayString | ||
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| let validateComment (commentString : string) = | ||
| let commentUrl = "https://raw.githubusercontent.com/HLWeil/isa-specs/master/source/_static/isajson/comment_schema.json" | ||
| validate commentUrl commentString | ||
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| let validateData (dataString : string) = | ||
| let dataUrl = "https://raw.githubusercontent.com/HLWeil/isa-specs/master/source/_static/isajson/data_schema.json" | ||
| validate dataUrl dataString | ||
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| let validateFactor (factorString : string) = | ||
| let factorUrl = "https://raw.githubusercontent.com/HLWeil/isa-specs/master/source/_static/isajson/factor_schema.json" | ||
| validate factorUrl factorString | ||
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| let validateFactorValue (factorValueString : string) = | ||
| let factorValueUrl = "https://raw.githubusercontent.com/HLWeil/isa-specs/master/source/_static/isajson/factor_value_schema.json" | ||
| validate factorValueUrl factorValueString | ||
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| let validateInvestigation (investigationString : string) = | ||
| let investigationUrl = "https://raw.githubusercontent.com/HLWeil/isa-specs/master/source/_static/isajson/investigation_schema.json" | ||
| validate investigationUrl investigationString | ||
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| let validateMaterialAttribute (materialAttributeString : string) = | ||
| let materialAttributeUrl = "https://raw.githubusercontent.com/HLWeil/isa-specs/master/source/_static/isajson/material_attribute_schema.json" | ||
| validate materialAttributeUrl materialAttributeString | ||
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| let validateMaterialAttributeValue (materialAttributeValueString : string) = | ||
| let materialAttributeValueUrl = "https://raw.githubusercontent.com/HLWeil/isa-specs/master/source/_static/isajson/material_attribute_value_schema.json" | ||
| validate materialAttributeValueUrl materialAttributeValueString | ||
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| let validateMaterial (materialString : string) = | ||
| let materialUrl = "https://raw.githubusercontent.com/HLWeil/isa-specs/master/source/_static/isajson/material_schema.json" | ||
| validate materialUrl materialString | ||
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| let validateOntologyAnnotation (ontologyAnnotationString : string) = | ||
| let ontologyAnnotationUrl = "https://raw.githubusercontent.com/HLWeil/isa-specs/master/source/_static/isajson/ontology_annotation_schema.json" | ||
| validate ontologyAnnotationUrl ontologyAnnotationString | ||
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| let validateOntologySourceReference (ontologySourceReferenceString : string) = | ||
| let ontologySourceReferenceUrl = "https://raw.githubusercontent.com/HLWeil/isa-specs/master/source/_static/isajson/ontology_source_reference_schema.json" | ||
| validate ontologySourceReferenceUrl ontologySourceReferenceString | ||
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| let validatePerson (personString : string) = | ||
| let personUrl = "https://raw.githubusercontent.com/HLWeil/isa-specs/master/source/_static/isajson/person_schema.json" | ||
| validate personUrl personString | ||
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| let validateProcessParameterValue (processParameterValueString : string) = | ||
| let processParameterValueUrl = "https://raw.githubusercontent.com/HLWeil/isa-specs/master/source/_static/isajson/process_parameter_value_schema.json" | ||
| validate processParameterValueUrl processParameterValueString | ||
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| let validateProcess (processString : string) = | ||
| let processUrl = "https://raw.githubusercontent.com/HLWeil/isa-specs/master/source/_static/isajson/process_schema.json" | ||
| validate processUrl processString | ||
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| let validateProtocolParameter (protocolParameterString : string) = | ||
| let protocolParameterUrl = "https://raw.githubusercontent.com/HLWeil/isa-specs/master/source/_static/isajson/protocol_parameter_schema.json" | ||
| validate protocolParameterUrl protocolParameterString | ||
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| let validateProtocol (protocolString : string) = | ||
| let protocolUrl = "https://raw.githubusercontent.com/HLWeil/isa-specs/master/source/_static/isajson/protocol_schema.json" | ||
| validate protocolUrl protocolString | ||
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| let validatePublication (publicationString : string) = | ||
| let publicationUrl = "https://raw.githubusercontent.com/HLWeil/isa-specs/master/source/_static/isajson/publication_schema.json" | ||
| validate publicationUrl publicationString | ||
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| let validateSample (sampleString : string) = | ||
| let sampleUrl = "https://raw.githubusercontent.com/HLWeil/isa-specs/master/source/_static/isajson/sample_schema.json" | ||
| validate sampleUrl sampleString | ||
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| let validateSource (sourceString : string) = | ||
| let sourceUrl = "https://raw.githubusercontent.com/HLWeil/isa-specs/master/source/_static/isajson/source_schema.json" | ||
| validate sourceUrl sourceString | ||
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| let validateStudy (studyString : string) = | ||
| let studyUrl = "https://raw.githubusercontent.com/HLWeil/isa-specs/master/source/_static/isajson/study_schema.json" | ||
| validate studyUrl studyString |
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| Original file line number | Diff line number | Diff line change |
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| @@ -0,0 +1,20 @@ | ||
| namespace ISADotNet.Validation | ||
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| type ValidationResult = | ||
| | Ok | ||
| | Failed of string [] | ||
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| member this.Success = | ||
| match this with | ||
| | Ok -> true | ||
| | _ -> false | ||
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| member this.GetErrors() = | ||
| match this with | ||
| | Ok -> [||] | ||
| | Failed errors -> errors | ||
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| static member internal OfJSchemaOutput (output : bool * string []) = | ||
| match output with | ||
| | true, _ -> Ok | ||
| | false, errors -> Failed errors |
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