diff --git a/appendix b/appendix
index 5b814c5..4e10dee 100644
--- a/appendix
+++ b/appendix
@@ -1,13 +1,6 @@
 # Re-enable man pages disabled in Ubuntu 18 minimal image
 # https://wiki.ubuntu.com/Minimal
 USER root
-RUN yes | unminimize
-# NOTE: $NB_PYTHON_PREFIX is the same as $CONDA_PREFIX at run-time.
-# $CONDA_PREFIX isn't available in this context.
-# NOTE: Prepending ensures a working path; if $MANPATH was previously empty,
-# the trailing colon ensures that system paths are searched.
-ENV MANPATH="${NB_PYTHON_PREFIX}/share/man:${MANPATH}"
-RUN mandb
 
 ENV R_VERSION="4.4.1"
 ENV R_HOME="/usr/local/lib/R"
diff --git a/apt.txt b/apt.txt
deleted file mode 100644
index b9b54de..0000000
--- a/apt.txt
+++ /dev/null
@@ -1,9 +0,0 @@
-# Some linux packages for basic terminal work, particularly
-# oriented at users new to Unix/cmd line environments.
-
-# Basic unix tools
-man
-man-db
-manpages-posix
-manpages-dev
-manpages-posix-dev
diff --git a/conda-lock.yml b/conda-lock.yml
deleted file mode 100644
index bab9b01..0000000
--- a/conda-lock.yml
+++ /dev/null
@@ -1,4919 +0,0 @@
-# This lock file was generated by conda-lock (https://github.com/conda/conda-lock). DO NOT EDIT!
-#
-# A "lock file" contains a concrete list of package versions (with checksums) to be installed. Unlike
-# e.g. `conda env create`, the resulting environment will not change as new package versions become
-# available, unless you explicitly update the lock file.
-#
-# Install this environment as "YOURENV" with:
-#     conda-lock install -n YOURENV conda-lock.yml
-# To update a single package to the latest version compatible with the version constraints in the source:
-#     conda-lock lock  --lockfile conda-lock.yml --update PACKAGE
-# To re-solve the entire environment, e.g. after changing a version constraint in the source file:
-#     conda-lock -f environment.yml --lockfile conda-lock.yml
-version: 1
-metadata:
-  content_hash:
-    linux-64: 1d7a6463af2a751a0a9cd46965951f0f8e3e7b91e68c4cb30234131621b65865
-  channels:
-  - url: conda-forge
-    used_env_vars: []
-  platforms:
-  - linux-64
-  sources:
-  - environment.yml
-package:
-- name: _libgcc_mutex
-  version: '0.1'
-  manager: conda
-  platform: linux-64
-  dependencies: {}
-  url: https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2
-  hash:
-    md5: d7c89558ba9fa0495403155b64376d81
-    sha256: fe51de6107f9edc7aa4f786a70f4a883943bc9d39b3bb7307c04c41410990726
-  category: main
-  optional: false
-- name: _openmp_mutex
-  version: '4.5'
-  manager: conda
-  platform: linux-64
-  dependencies:
-    _libgcc_mutex: '0.1'
-    libgomp: '>=7.5.0'
-  url: https://conda.anaconda.org/conda-forge/linux-64/_openmp_mutex-4.5-2_gnu.tar.bz2
-  hash:
-    md5: 73aaf86a425cc6e73fcf236a5a46396d
-    sha256: fbe2c5e56a653bebb982eda4876a9178aedfc2b545f25d0ce9c4c0b508253d22
-  category: main
-  optional: false
-- name: accessible-pygments
-  version: 0.0.5
-  manager: conda
-  platform: linux-64
-  dependencies:
-    pygments: ''
-    python: '>=3.9'
-  url: https://conda.anaconda.org/conda-forge/noarch/accessible-pygments-0.0.5-pyhd8ed1ab_0.conda
-  hash:
-    md5: 1bb1ef9806a9a20872434f58b3e7fc1a
-    sha256: 712c1875bcd32674e8ce2f418f0b2875ecb98e6bcbb21ec7502dae8ff4b0f73c
-  category: main
-  optional: false
-- name: aiohappyeyeballs
-  version: 2.4.3
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=3.8.0'
-  url: https://conda.anaconda.org/conda-forge/noarch/aiohappyeyeballs-2.4.3-pyhd8ed1ab_0.conda
-  hash:
-    md5: ec763b0a58960558ca0ad7255a51a237
-    sha256: cfa5bed6ad8d00c2bc2c6ccf115e91ef1a9981b73c68537b247f1a964a841cac
-  category: main
-  optional: false
-- name: aiohttp
-  version: 3.10.9
-  manager: conda
-  platform: linux-64
-  dependencies:
-    __glibc: '>=2.17,<3.0.a0'
-    aiohappyeyeballs: '>=2.3.0'
-    aiosignal: '>=1.1.2'
-    attrs: '>=17.3.0'
-    frozenlist: '>=1.1.1'
-    libgcc: '>=13'
-    multidict: '>=4.5,<7.0'
-    python: '>=3.11,<3.12.0a0'
-    python_abi: 3.11.*
-    yarl: '>=1.12.0,<2.0'
-  url: https://conda.anaconda.org/conda-forge/linux-64/aiohttp-3.10.9-py311h9ecbd09_0.conda
-  hash:
-    md5: 58260dff6a7e505eaa1b973780f0308a
-    sha256: 98a527b592ba3005b9d34761fa47ea1cecaf3977e7a96e7507232c0af0fe4ae8
-  category: main
-  optional: false
-- name: aiosignal
-  version: 1.3.1
-  manager: conda
-  platform: linux-64
-  dependencies:
-    frozenlist: '>=1.1.0'
-    python: '>=3.7'
-  url: https://conda.anaconda.org/conda-forge/noarch/aiosignal-1.3.1-pyhd8ed1ab_0.tar.bz2
-  hash:
-    md5: d1e1eb7e21a9e2c74279d87dafb68156
-    sha256: 575c742e14c86575986dc867463582a970463da50b77264cdf54df74f5563783
-  category: main
-  optional: false
-- name: aiosqlite
-  version: 0.19.0
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=3.6'
-    typing-extensions: '>=3.7.2'
-  url: https://conda.anaconda.org/conda-forge/noarch/aiosqlite-0.19.0-pyhd8ed1ab_0.conda
-  hash:
-    md5: c60a47f9f29057417165a8af579396a8
-    sha256: 2f4b4d70244be67f49db02fca06ac5449593fe5c523791d5185d1cbc807a5af6
-  category: main
-  optional: false
-- name: alabaster
-  version: 0.7.16
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=3.9'
-  url: https://conda.anaconda.org/conda-forge/noarch/alabaster-0.7.16-pyhd8ed1ab_0.conda
-  hash:
-    md5: def531a3ac77b7fb8c21d17bb5d0badb
-    sha256: fd39ad2fabec1569bbb0dfdae34ab6ce7de6ec09dcec8638f83dad0373594069
-  category: main
-  optional: false
-- name: alembic
-  version: 1.13.3
-  manager: conda
-  platform: linux-64
-  dependencies:
-    importlib-metadata: ''
-    importlib_resources: ''
-    mako: ''
-    python: '>=3.8'
-    sqlalchemy: '>=1.3.0'
-    typing-extensions: '>=4'
-  url: https://conda.anaconda.org/conda-forge/noarch/alembic-1.13.3-pyhd8ed1ab_0.conda
-  hash:
-    md5: c81dc0d6ce99cf5c46e8b27dc37b5a75
-    sha256: 7e61183ef0476f6e568e7021ba2abe0a566aaf1b9263575838fec6cb50d5eb42
-  category: main
-  optional: false
-- name: annotated-types
-  version: 0.7.0
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=3.7'
-    typing-extensions: '>=4.0.0'
-  url: https://conda.anaconda.org/conda-forge/noarch/annotated-types-0.7.0-pyhd8ed1ab_0.conda
-  hash:
-    md5: 7e9f4612544c8edbfd6afad17f1bd045
-    sha256: 668f0825b6c18e4012ca24a0070562b6ec801ebc7008228a428eb52b4038873f
-  category: main
-  optional: false
-- name: anyio
-  version: 4.6.0
-  manager: conda
-  platform: linux-64
-  dependencies:
-    exceptiongroup: '>=1.0.2'
-    idna: '>=2.8'
-    python: '>=3.9'
-    sniffio: '>=1.1'
-    typing_extensions: '>=4.1'
-  url: https://conda.anaconda.org/conda-forge/noarch/anyio-4.6.0-pyhd8ed1ab_1.conda
-  hash:
-    md5: bc13891a047f50728b03595531f7f92e
-    sha256: d05493abca6ac1b0cb15f5d48c3117bddd73cc21e48bfcb460570cfa2ea2f909
-  category: main
-  optional: false
-- name: aom
-  version: 3.9.1
-  manager: conda
-  platform: linux-64
-  dependencies:
-    libgcc-ng: '>=12'
-    libstdcxx-ng: '>=12'
-  url: https://conda.anaconda.org/conda-forge/linux-64/aom-3.9.1-hac33072_0.conda
-  hash:
-    md5: 346722a0be40f6edc53f12640d301338
-    sha256: b08ef033817b5f9f76ce62dfcac7694e7b6b4006420372de22494503decac855
-  category: main
-  optional: false
-- name: argon2-cffi
-  version: 23.1.0
-  manager: conda
-  platform: linux-64
-  dependencies:
-    argon2-cffi-bindings: ''
-    python: '>=3.7'
-    typing-extensions: ''
-  url: https://conda.anaconda.org/conda-forge/noarch/argon2-cffi-23.1.0-pyhd8ed1ab_0.conda
-  hash:
-    md5: 3afef1f55a1366b4d3b6a0d92e2235e4
-    sha256: 130766446f5507bd44df957b6b5c898a8bd98f024bb426ed6cb9ff1ad67fc677
-  category: main
-  optional: false
-- name: argon2-cffi-bindings
-  version: 21.2.0
-  manager: conda
-  platform: linux-64
-  dependencies:
-    __glibc: '>=2.17,<3.0.a0'
-    cffi: '>=1.0.1'
-    libgcc: '>=13'
-    python: '>=3.11,<3.12.0a0'
-    python_abi: 3.11.*
-  url: https://conda.anaconda.org/conda-forge/linux-64/argon2-cffi-bindings-21.2.0-py311h9ecbd09_5.conda
-  hash:
-    md5: 18143eab7fcd6662c604b85850f0db1e
-    sha256: d1af1fbcb698c2e07b0d1d2b98384dd6021fa55c8bcb920e3652e0b0c393881b
-  category: main
-  optional: false
-- name: arrow
-  version: 1.3.0
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=3.8'
-    python-dateutil: '>=2.7.0'
-    types-python-dateutil: '>=2.8.10'
-  url: https://conda.anaconda.org/conda-forge/noarch/arrow-1.3.0-pyhd8ed1ab_0.conda
-  hash:
-    md5: b77d8c2313158e6e461ca0efb1c2c508
-    sha256: ff49825c7f9e29e09afa6284300810e7a8640d621740efb47c4541f4dc4969db
-  category: main
-  optional: false
-- name: asttokens
-  version: 2.4.1
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=3.5'
-    six: '>=1.12.0'
-  url: https://conda.anaconda.org/conda-forge/noarch/asttokens-2.4.1-pyhd8ed1ab_0.conda
-  hash:
-    md5: 5f25798dcefd8252ce5f9dc494d5f571
-    sha256: 708168f026df19a0344983754d27d1f7b28bb21afc7b97a82f02c4798a3d2111
-  category: main
-  optional: false
-- name: async-lru
-  version: 2.0.4
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=3.8'
-    typing_extensions: '>=4.0.0'
-  url: https://conda.anaconda.org/conda-forge/noarch/async-lru-2.0.4-pyhd8ed1ab_0.conda
-  hash:
-    md5: 3d081de3a6ea9f894bbb585e8e3a4dcb
-    sha256: 7ed83731979fe5b046c157730e50af0e24454468bbba1ed8fc1a3107db5d7518
-  category: main
-  optional: false
-- name: async-timeout
-  version: 4.0.3
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=3.7'
-    typing-extensions: '>=3.6.5'
-  url: https://conda.anaconda.org/conda-forge/noarch/async-timeout-4.0.3-pyhd8ed1ab_0.conda
-  hash:
-    md5: 3ce482ec3066e6d809dbbb1d1679f215
-    sha256: bd8b698e7f037a9c6107216646f1191f4f7a7fc6da6c34d1a6d4c211bcca8979
-  category: main
-  optional: false
-- name: async_generator
-  version: '1.10'
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=3.5'
-  url: https://conda.anaconda.org/conda-forge/noarch/async_generator-1.10-pyhd8ed1ab_1.conda
-  hash:
-    md5: bcee238f99c34ca11add65c1684c5a2d
-    sha256: 8647ec9fba010c7fd34a00c0c2a04902141f1c5c1d55d80e6c7b99649b6a1c72
-  category: main
-  optional: false
-- name: attrs
-  version: 24.2.0
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=3.7'
-  url: https://conda.anaconda.org/conda-forge/noarch/attrs-24.2.0-pyh71513ae_0.conda
-  hash:
-    md5: 6732fa52eb8e66e5afeb32db8701a791
-    sha256: 28dba85a7e0f7fb57d7315e13f603d1e41b83c5b88aa2a602596b52c833a2ff8
-  category: main
-  optional: false
-- name: babel
-  version: 2.14.0
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=3.7'
-    pytz: ''
-    setuptools: ''
-  url: https://conda.anaconda.org/conda-forge/noarch/babel-2.14.0-pyhd8ed1ab_0.conda
-  hash:
-    md5: 9669586875baeced8fc30c0826c3270e
-    sha256: 8584e3da58e92b72641c89ff9b98c51f0d5dbe76e527867804cbdf03ac91d8e6
-  category: main
-  optional: false
-- name: beautifulsoup4
-  version: 4.12.3
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=3.6'
-    soupsieve: '>=1.2'
-  url: https://conda.anaconda.org/conda-forge/noarch/beautifulsoup4-4.12.3-pyha770c72_0.conda
-  hash:
-    md5: 332493000404d8411859539a5a630865
-    sha256: 7b05b2d0669029326c623b9df7a29fa49d1982a9e7e31b2fea34b4c9a4a72317
-  category: main
-  optional: false
-- name: bleach
-  version: 6.1.0
-  manager: conda
-  platform: linux-64
-  dependencies:
-    packaging: ''
-    python: '>=3.6'
-    setuptools: ''
-    six: '>=1.9.0'
-    webencodings: ''
-  url: https://conda.anaconda.org/conda-forge/noarch/bleach-6.1.0-pyhd8ed1ab_0.conda
-  hash:
-    md5: 0ed9d7c0e9afa7c025807a9a8136ea3e
-    sha256: 845e77ef495376c5c3c328ccfd746ca0ef1978150cae8eae61a300fe7755fb08
-  category: main
-  optional: false
-- name: blinker
-  version: 1.8.2
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=3.8'
-  url: https://conda.anaconda.org/conda-forge/noarch/blinker-1.8.2-pyhd8ed1ab_0.conda
-  hash:
-    md5: cf85c002319c15e9721934104aaa1137
-    sha256: 8ca3cd8f78d0607df28c9f76adb9800348f8f2dc8aa49d188a995a0acdc4477d
-  category: main
-  optional: false
-- name: blosc
-  version: 1.21.6
-  manager: conda
-  platform: linux-64
-  dependencies:
-    libgcc-ng: '>=12'
-    libstdcxx-ng: '>=12'
-    libzlib: '>=1.3.1,<2.0a0'
-    lz4-c: '>=1.9.3,<1.10.0a0'
-    snappy: '>=1.2.0,<1.3.0a0'
-    zstd: '>=1.5.6,<1.6.0a0'
-  url: https://conda.anaconda.org/conda-forge/linux-64/blosc-1.21.6-hef167b5_0.conda
-  hash:
-    md5: 54fe76ab3d0189acaef95156874db7f9
-    sha256: 6cc260f9c6d32c5e728a2099a52fdd7ee69a782fff7b400d0606fcd32e0f5fd1
-  category: main
-  optional: false
-- name: brotli
-  version: 1.1.0
-  manager: conda
-  platform: linux-64
-  dependencies:
-    __glibc: '>=2.17,<3.0.a0'
-    brotli-bin: 1.1.0
-    libbrotlidec: 1.1.0
-    libbrotlienc: 1.1.0
-    libgcc: '>=13'
-  url: https://conda.anaconda.org/conda-forge/linux-64/brotli-1.1.0-hb9d3cd8_2.conda
-  hash:
-    md5: 98514fe74548d768907ce7a13f680e8f
-    sha256: fcb0b5b28ba7492093e54f3184435144e074dfceab27ac8e6a9457e736565b0b
-  category: main
-  optional: false
-- name: brotli-bin
-  version: 1.1.0
-  manager: conda
-  platform: linux-64
-  dependencies:
-    __glibc: '>=2.17,<3.0.a0'
-    libbrotlidec: 1.1.0
-    libbrotlienc: 1.1.0
-    libgcc: '>=13'
-  url: https://conda.anaconda.org/conda-forge/linux-64/brotli-bin-1.1.0-hb9d3cd8_2.conda
-  hash:
-    md5: c63b5e52939e795ba8d26e35d767a843
-    sha256: 261364d7445513b9a4debc345650fad13c627029bfc800655a266bf1e375bc65
-  category: main
-  optional: false
-- name: brotli-python
-  version: 1.1.0
-  manager: conda
-  platform: linux-64
-  dependencies:
-    __glibc: '>=2.17,<3.0.a0'
-    libgcc: '>=13'
-    libstdcxx: '>=13'
-    python: '>=3.11,<3.12.0a0'
-    python_abi: 3.11.*
-  url: https://conda.anaconda.org/conda-forge/linux-64/brotli-python-1.1.0-py311hfdbb021_2.conda
-  hash:
-    md5: d21daab070d76490cb39a8f1d1729d79
-    sha256: 949913bbd1f74d1af202d3e4bff2e0a4e792ec00271dc4dd08641d4221aa2e12
-  category: main
-  optional: false
-- name: brunsli
-  version: '0.1'
-  manager: conda
-  platform: linux-64
-  dependencies:
-    brotli: '>=1.0.9,<2.0a0'
-    libgcc-ng: '>=9.3.0'
-    libstdcxx-ng: '>=9.3.0'
-  url: https://conda.anaconda.org/conda-forge/linux-64/brunsli-0.1-h9c3ff4c_0.tar.bz2
-  hash:
-    md5: c1ac6229d0bfd14f8354ff9ad2a26cad
-    sha256: 36da32e5a6beab7a9af39be1c8f42e5eca716e64562cb9d5e0d559c14406b11d
-  category: main
-  optional: false
-- name: bzip2
-  version: 1.0.8
-  manager: conda
-  platform: linux-64
-  dependencies:
-    __glibc: '>=2.17,<3.0.a0'
-    libgcc-ng: '>=12'
-  url: https://conda.anaconda.org/conda-forge/linux-64/bzip2-1.0.8-h4bc722e_7.conda
-  hash:
-    md5: 62ee74e96c5ebb0af99386de58cf9553
-    sha256: 5ced96500d945fb286c9c838e54fa759aa04a7129c59800f0846b4335cee770d
-  category: main
-  optional: false
-- name: c-ares
-  version: 1.33.1
-  manager: conda
-  platform: linux-64
-  dependencies:
-    __glibc: '>=2.28,<3.0.a0'
-    libgcc-ng: '>=13'
-  url: https://conda.anaconda.org/conda-forge/linux-64/c-ares-1.33.1-heb4867d_0.conda
-  hash:
-    md5: 0d3c60291342c0c025db231353376dfb
-    sha256: 2cb24f613eaf2850b1a08f28f967b10d8bd44ef623efa0154dc45eb718776be6
-  category: main
-  optional: false
-- name: c-blosc2
-  version: 2.15.1
-  manager: conda
-  platform: linux-64
-  dependencies:
-    __glibc: '>=2.17,<3.0.a0'
-    libgcc-ng: '>=12'
-    libstdcxx-ng: '>=12'
-    lz4-c: '>=1.9.3,<1.10.0a0'
-    zlib-ng: '>=2.2.1,<2.3.0a0'
-    zstd: '>=1.5.6,<1.6.0a0'
-  url: https://conda.anaconda.org/conda-forge/linux-64/c-blosc2-2.15.1-hc57e6cf_0.conda
-  hash:
-    md5: 5f84961d86d0ef78851cb34f9d5e31fe
-    sha256: 6b11cae208878fbf621fbc22135a7912fd0ef19301d0b654858ae16b972410dc
-  category: main
-  optional: false
-- name: ca-certificates
-  version: 2024.8.30
-  manager: conda
-  platform: linux-64
-  dependencies: {}
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-- name: fsspec
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-- name: gh-scoped-creds
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-- name: jinja2
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-- name: json5
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-- name: jsonpatch
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-- name: jsonschema-specifications
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-- name: jsonschema-with-format-nongpl
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-- name: jupyter-ai
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-- name: latexcodec
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-- name: ld_impl_linux-64
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-- name: lerc
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-- name: libaec
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-- name: libavif16
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-- name: libbrotlicommon
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-- name: libbrotlidec
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-- name: libbrotlienc
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-- name: libcblas
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-- name: libcurl
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-- name: libdeflate
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-  manager: conda
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-  dependencies:
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-- name: libedit
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-- name: libev
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-- name: libexpat
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-- name: libffi
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-- name: libgcc
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-  manager: conda
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-- name: libgcc-ng
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-- name: libgfortran
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-- name: libgfortran-ng
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-- name: libgfortran5
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-- name: libgomp
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-- name: libhwy
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-  dependencies:
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-    libstdcxx-ng: '>=12'
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-- name: libiconv
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-  manager: conda
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-  dependencies:
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-- name: libjpeg-turbo
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-- name: libjxl
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-- name: liblapack
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-  platform: linux-64
-  dependencies:
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-  url: https://conda.anaconda.org/conda-forge/linux-64/liblapack-3.9.0-24_linux64_openblas.conda
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-- name: libnghttp2
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-  manager: conda
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-    libstdcxx-ng: '>=12'
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-- name: libnsl
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-  manager: conda
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-  dependencies:
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-  url: https://conda.anaconda.org/conda-forge/linux-64/libnsl-2.0.1-hd590300_0.conda
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-- name: libopenblas
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-  manager: conda
-  platform: linux-64
-  dependencies:
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-    libgfortran-ng: ''
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-- name: libpng
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-  dependencies:
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-    libgcc: '>=13'
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-- name: libsodium
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-  dependencies:
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-  url: https://conda.anaconda.org/conda-forge/linux-64/libsodium-1.0.20-h4ab18f5_0.conda
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-- name: libsqlite
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-  manager: conda
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-  dependencies:
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-    libgcc: '>=13'
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-- name: libssh2
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-  manager: conda
-  platform: linux-64
-  dependencies:
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-    libzlib: '>=1.2.13,<2.0.0a0'
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-- name: libstdcxx
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-  dependencies:
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-  url: https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-14.1.0-hc0a3c3a_1.conda
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-- name: libstdcxx-ng
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-  platform: linux-64
-  dependencies:
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-  url: https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-ng-14.1.0-h4852527_1.conda
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-- name: libtiff
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-- name: libuuid
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-  dependencies:
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-  url: https://conda.anaconda.org/conda-forge/linux-64/libuuid-2.38.1-h0b41bf4_0.conda
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-- name: libuv
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-  dependencies:
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-- name: libwebp-base
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-  url: https://conda.anaconda.org/conda-forge/linux-64/libwebp-base-1.4.0-hd590300_0.conda
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-- name: libxcrypt
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-  url: https://conda.anaconda.org/conda-forge/linux-64/libxcrypt-4.4.36-hd590300_1.conda
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-- name: libzlib
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-- name: libzopfli
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-  manager: conda
-  platform: linux-64
-  dependencies:
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-- name: linkify-it-py
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-  dependencies:
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-- name: locket
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-- name: lz4-c
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-  dependencies:
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-    libstdcxx-ng: '>=12'
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-- name: mako
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-  dependencies:
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-- name: markdown-it-py
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-  dependencies:
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-- name: markupsafe
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-  dependencies:
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-- name: marshmallow
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-  manager: conda
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-  dependencies:
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-    python: '>=3.8'
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-- name: matplotlib-inline
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-  dependencies:
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-  url: https://conda.anaconda.org/conda-forge/noarch/matplotlib-inline-0.1.7-pyhd8ed1ab_0.conda
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-- name: mdit-py-plugins
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-- name: mdurl
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-  dependencies:
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-  url: https://conda.anaconda.org/conda-forge/noarch/mdurl-0.1.2-pyhd8ed1ab_0.conda
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-- name: mistune
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-  manager: conda
-  platform: linux-64
-  dependencies:
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-  url: https://conda.anaconda.org/conda-forge/noarch/mistune-3.0.2-pyhd8ed1ab_0.conda
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-- name: msgpack-python
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-  dependencies:
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-- name: multidict
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-  manager: conda
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-  dependencies:
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-  url: https://conda.anaconda.org/conda-forge/linux-64/multidict-6.1.0-py311h9ecbd09_0.conda
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-- name: mypy_extensions
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-  dependencies:
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-  url: https://conda.anaconda.org/conda-forge/noarch/mypy_extensions-1.0.0-pyha770c72_0.conda
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-- name: myst-nb
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-- name: myst-parser
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-- name: nbclient
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-- name: pandoc
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-- name: pandocfilters
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-- name: parso
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-- name: partd
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-- name: pcre2
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-- name: perl
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-- name: pip
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-- name: platformdirs
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-- name: prometheus_client
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-- name: prompt-toolkit
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-- name: rfc3986-validator
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-- name: sphinxcontrib-serializinghtml
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-- name: sqlalchemy
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-- name: stack_data
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-- name: svt-av1
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-- name: syncthing
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-- name: tabulate
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-- name: tblib
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-- name: tenacity
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-- name: terminado
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-- name: tifffile
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-- name: tinycss2
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-- name: tk
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-- name: tomli
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-- name: toolz
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-- name: tornado
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-  hash:
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-  optional: false
-- name: types-python-dateutil
-  version: 2.9.0.20241003
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=3.6'
-  url: https://conda.anaconda.org/conda-forge/noarch/types-python-dateutil-2.9.0.20241003-pyhff2d567_0.conda
-  hash:
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-    sha256: 8489af986daebfbcd13d3748ba55431259206e37f184ab42a57e107fecd85e02
-  category: main
-  optional: false
-- name: typing-extensions
-  version: 4.12.2
-  manager: conda
-  platform: linux-64
-  dependencies:
-    typing_extensions: 4.12.2
-  url: https://conda.anaconda.org/conda-forge/noarch/typing-extensions-4.12.2-hd8ed1ab_0.conda
-  hash:
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-    sha256: d3b9a8ed6da7c9f9553c5fd8a4fca9c3e0ab712fa5f497859f82337d67533b73
-  category: main
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-- name: typing_extensions
-  version: 4.12.2
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=3.8'
-  url: https://conda.anaconda.org/conda-forge/noarch/typing_extensions-4.12.2-pyha770c72_0.conda
-  hash:
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-    sha256: 0fce54f8ec3e59f5ef3bb7641863be4e1bf1279623e5af3d3fa726e8f7628ddb
-  category: main
-  optional: false
-- name: typing_inspect
-  version: 0.9.0
-  manager: conda
-  platform: linux-64
-  dependencies:
-    mypy_extensions: '>=0.3.0'
-    python: '>=3.5'
-    typing_extensions: '>=3.7.4'
-  url: https://conda.anaconda.org/conda-forge/noarch/typing_inspect-0.9.0-pyhd8ed1ab_0.conda
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-  category: main
-  optional: false
-- name: typing_utils
-  version: 0.1.0
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=3.6.1'
-  url: https://conda.anaconda.org/conda-forge/noarch/typing_utils-0.1.0-pyhd8ed1ab_0.tar.bz2
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-  category: main
-  optional: false
-- name: tzdata
-  version: 2024b
-  manager: conda
-  platform: linux-64
-  dependencies: {}
-  url: https://conda.anaconda.org/conda-forge/noarch/tzdata-2024b-hc8b5060_0.conda
-  hash:
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-  category: main
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-- name: uc-micro-py
-  version: 1.0.3
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=3.6'
-  url: https://conda.anaconda.org/conda-forge/noarch/uc-micro-py-1.0.3-pyhd8ed1ab_0.conda
-  hash:
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-    sha256: 54293cd94da3a6b978b353eb7897555055d925ad0008bc73e85cca19e2587ed0
-  category: main
-  optional: false
-- name: uri-template
-  version: 1.3.0
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=3.7'
-  url: https://conda.anaconda.org/conda-forge/noarch/uri-template-1.3.0-pyhd8ed1ab_0.conda
-  hash:
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-    sha256: b76904b53721dc88a46352324c79d2b077c2f74a9f7208ad2c4249892669ae94
-  category: main
-  optional: false
-- name: urllib3
-  version: 2.2.3
-  manager: conda
-  platform: linux-64
-  dependencies:
-    brotli-python: '>=1.0.9'
-    h2: '>=4,<5'
-    pysocks: '>=1.5.6,<2.0,!=1.5.7'
-    python: '>=3.8'
-    zstandard: '>=0.18.0'
-  url: https://conda.anaconda.org/conda-forge/noarch/urllib3-2.2.3-pyhd8ed1ab_0.conda
-  hash:
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-    sha256: b6bb34ce41cd93956ad6eeee275ed52390fb3788d6c75e753172ea7ac60b66e5
-  category: main
-  optional: false
-- name: voila
-  version: 0.5.7
-  manager: conda
-  platform: linux-64
-  dependencies:
-    jupyter_client: '>=7.4.4,<=9'
-    jupyter_core: '>=4.11.0'
-    jupyter_server: '>=2.0.0,<3'
-    jupyterlab_server: '>=2.3.0,<3'
-    nbclient: '>=0.4.0'
-    nbconvert: '>=6.4.5,<8'
-    python: '>=3.8'
-    traitlets: '>=5.0.3,<6'
-    websockets: '>=9'
-  url: https://conda.anaconda.org/conda-forge/noarch/voila-0.5.7-pyhd8ed1ab_1.conda
-  hash:
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-  category: main
-  optional: false
-- name: wcwidth
-  version: 0.2.13
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=3.8'
-  url: https://conda.anaconda.org/conda-forge/noarch/wcwidth-0.2.13-pyhd8ed1ab_0.conda
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-  category: main
-  optional: false
-- name: webcolors
-  version: 24.8.0
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=3.5'
-  url: https://conda.anaconda.org/conda-forge/noarch/webcolors-24.8.0-pyhd8ed1ab_0.conda
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-  category: main
-  optional: false
-- name: webencodings
-  version: 0.5.1
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=2.6'
-  url: https://conda.anaconda.org/conda-forge/noarch/webencodings-0.5.1-pyhd8ed1ab_2.conda
-  hash:
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-  category: main
-  optional: false
-- name: websocket-client
-  version: 1.8.0
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=3.8'
-  url: https://conda.anaconda.org/conda-forge/noarch/websocket-client-1.8.0-pyhd8ed1ab_0.conda
-  hash:
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-    sha256: 44a5e3b97feef24cd719f7851cca9af9799dc9c17d3e0298d5856baab2d682f5
-  category: main
-  optional: false
-- name: websockets
-  version: '13.1'
-  manager: conda
-  platform: linux-64
-  dependencies:
-    __glibc: '>=2.17,<3.0.a0'
-    libgcc: '>=13'
-    python: '>=3.11,<3.12.0a0'
-    python_abi: 3.11.*
-  url: https://conda.anaconda.org/conda-forge/linux-64/websockets-13.1-py311h9ecbd09_0.conda
-  hash:
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-    sha256: 531d6bf60ef0238a9143b28c732c42dc9787caac8204803c834423f5e483b9f5
-  category: main
-  optional: false
-- name: websockify
-  version: 0.12.0
-  manager: conda
-  platform: linux-64
-  dependencies:
-    jwcrypto: ''
-    libgcc-ng: '>=12'
-    numpy: ''
-    python: '>=3.11,<3.12.0a0'
-    python_abi: 3.11.*
-    redis-py: ''
-    requests: ''
-  url: https://conda.anaconda.org/conda-forge/linux-64/websockify-0.12.0-py311h331c9d8_0.conda
-  hash:
-    md5: 17feb9831a382e7e45e0a726c7fe94be
-    sha256: fee8c862567d0a75bd261d6e4d6013c47d8aabf74fe55d2783bc9e77f9f3e6ad
-  category: main
-  optional: false
-- name: wheel
-  version: 0.44.0
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=3.8'
-  url: https://conda.anaconda.org/conda-forge/noarch/wheel-0.44.0-pyhd8ed1ab_0.conda
-  hash:
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-    sha256: d828764736babb4322b8102094de38074dedfc71f5ff405c9dfee89191c14ebc
-  category: main
-  optional: false
-- name: widgetsnbextension
-  version: 4.0.13
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=3.7'
-  url: https://conda.anaconda.org/conda-forge/noarch/widgetsnbextension-4.0.13-pyhd8ed1ab_0.conda
-  hash:
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-    sha256: d155adc10f8c96f76d4468dbe37b33b4334dadf5cd4a95841aa009ca9bced5fa
-  category: main
-  optional: false
-- name: xz
-  version: 5.2.6
-  manager: conda
-  platform: linux-64
-  dependencies:
-    libgcc-ng: '>=12'
-  url: https://conda.anaconda.org/conda-forge/linux-64/xz-5.2.6-h166bdaf_0.tar.bz2
-  hash:
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-    sha256: 03a6d28ded42af8a347345f82f3eebdd6807a08526d47899a42d62d319609162
-  category: main
-  optional: false
-- name: yaml
-  version: 0.2.5
-  manager: conda
-  platform: linux-64
-  dependencies:
-    libgcc-ng: '>=9.4.0'
-  url: https://conda.anaconda.org/conda-forge/linux-64/yaml-0.2.5-h7f98852_2.tar.bz2
-  hash:
-    md5: 4cb3ad778ec2d5a7acbdf254eb1c42ae
-    sha256: a4e34c710eeb26945bdbdaba82d3d74f60a78f54a874ec10d373811a5d217535
-  category: main
-  optional: false
-- name: yarl
-  version: 1.13.1
-  manager: conda
-  platform: linux-64
-  dependencies:
-    __glibc: '>=2.17,<3.0.a0'
-    idna: '>=2.0'
-    libgcc: '>=13'
-    multidict: '>=4.0'
-    python: '>=3.11,<3.12.0a0'
-    python_abi: 3.11.*
-  url: https://conda.anaconda.org/conda-forge/linux-64/yarl-1.13.1-py311h9ecbd09_0.conda
-  hash:
-    md5: f9545ef8a367db7b2bb45a66650a752d
-    sha256: 27e4091c9f2af1a792756a7c604dd95f64dfaa231cffdea1e1f7367eaf7be43a
-  category: main
-  optional: false
-- name: zeromq
-  version: 4.3.5
-  manager: conda
-  platform: linux-64
-  dependencies:
-    __glibc: '>=2.17,<3.0.a0'
-    krb5: '>=1.21.3,<1.22.0a0'
-    libgcc: '>=13'
-    libsodium: '>=1.0.20,<1.0.21.0a0'
-    libstdcxx: '>=13'
-  url: https://conda.anaconda.org/conda-forge/linux-64/zeromq-4.3.5-ha4adb4c_5.conda
-  hash:
-    md5: e8372041ebb377237db9d0d24c7b5962
-    sha256: dd48adc07fcd029c86fbf82e68d0e4818c7744b768e08139379920b56b582814
-  category: main
-  optional: false
-- name: zfp
-  version: 1.0.1
-  manager: conda
-  platform: linux-64
-  dependencies:
-    __glibc: '>=2.17,<3.0.a0'
-    _openmp_mutex: '>=4.5'
-    libgcc: '>=13'
-    libstdcxx: '>=13'
-  url: https://conda.anaconda.org/conda-forge/linux-64/zfp-1.0.1-h5888daf_2.conda
-  hash:
-    md5: e0409515c467b87176b070bff5d9442e
-    sha256: 0dfafc75c72f308c0200836f2b973766cdcb8741b1ab61e0b462a34dd6b6ad20
-  category: main
-  optional: false
-- name: zict
-  version: 3.0.0
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=3.8'
-  url: https://conda.anaconda.org/conda-forge/noarch/zict-3.0.0-pyhd8ed1ab_0.conda
-  hash:
-    md5: cf30c2c15b82aacb07f9c09e28ff2275
-    sha256: 3d65c081514569ab3642ba7e6c2a6b4615778b596db6b1c82ee30a2d912539e5
-  category: main
-  optional: false
-- name: zipp
-  version: 3.20.2
-  manager: conda
-  platform: linux-64
-  dependencies:
-    python: '>=3.8'
-  url: https://conda.anaconda.org/conda-forge/noarch/zipp-3.20.2-pyhd8ed1ab_0.conda
-  hash:
-    md5: 4daaed111c05672ae669f7036ee5bba3
-    sha256: 1e84fcfa41e0afdd87ff41e6fbb719c96a0e098c1f79be342293ab0bd8dea322
-  category: main
-  optional: false
-- name: zlib
-  version: 1.3.1
-  manager: conda
-  platform: linux-64
-  dependencies:
-    __glibc: '>=2.17,<3.0.a0'
-    libgcc: '>=13'
-    libzlib: 1.3.1
-  url: https://conda.anaconda.org/conda-forge/linux-64/zlib-1.3.1-hb9d3cd8_2.conda
-  hash:
-    md5: c9f075ab2f33b3bbee9e62d4ad0a6cd8
-    sha256: 5d7c0e5f0005f74112a34a7425179f4eb6e73c92f5d109e6af4ddeca407c92ab
-  category: main
-  optional: false
-- name: zlib-ng
-  version: 2.2.2
-  manager: conda
-  platform: linux-64
-  dependencies:
-    __glibc: '>=2.17,<3.0.a0'
-    libgcc: '>=13'
-    libstdcxx: '>=13'
-  url: https://conda.anaconda.org/conda-forge/linux-64/zlib-ng-2.2.2-h5888daf_0.conda
-  hash:
-    md5: 135fd3c66bccad3d2254f50f9809e86a
-    sha256: 9288b88a2448a6ef9824ff4a9f9384f45f6444b009b9fa3e5f335d0c52e86e4b
-  category: main
-  optional: false
-- name: zstandard
-  version: 0.23.0
-  manager: conda
-  platform: linux-64
-  dependencies:
-    __glibc: '>=2.17,<3.0.a0'
-    cffi: '>=1.11'
-    libgcc: '>=13'
-    python: '>=3.11,<3.12.0a0'
-    python_abi: 3.11.*
-    zstd: '>=1.5.6,<1.6.0a0'
-  url: https://conda.anaconda.org/conda-forge/linux-64/zstandard-0.23.0-py311hbc35293_1.conda
-  hash:
-    md5: aec590674ba365e50ae83aa2d6e1efae
-    sha256: a5cf0eef1ffce0d710eb3dffcb07d9d5922d4f7a141abc96f6476b98600f718f
-  category: main
-  optional: false
-- name: zstd
-  version: 1.5.6
-  manager: conda
-  platform: linux-64
-  dependencies:
-    libgcc-ng: '>=12'
-    libstdcxx-ng: '>=12'
-    libzlib: '>=1.2.13,<2.0.0a0'
-  url: https://conda.anaconda.org/conda-forge/linux-64/zstd-1.5.6-ha6fb4c9_0.conda
-  hash:
-    md5: 4d056880988120e29d75bfff282e0f45
-    sha256: c558b9cc01d9c1444031bd1ce4b9cff86f9085765f17627a6cd85fc623c8a02b
-  category: main
-  optional: false
-- name: jupyter-desktop-server
-  version: 0.1.3
-  manager: pip
-  platform: linux-64
-  dependencies:
-    jupyter-server-proxy: '>=1.4.0'
-  url: https://files.pythonhosted.org/packages/15/df/6f249cd3c3db684c8f9e67bc5470c4b593f882fbb03b1649f72ae7a26566/jupyter-desktop-server-0.1.3.tar.gz
-  hash:
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-  category: main
-  optional: false
-- name: nbconvert
-  version: 7.16.4
-  manager: pip
-  platform: linux-64
-  dependencies:
-    beautifulsoup4: '*'
-    bleach: '!=5.0.0'
-    defusedxml: '*'
-    jinja2: '>=3.0'
-    jupyter-core: '>=4.7'
-    jupyterlab-pygments: '*'
-    markupsafe: '>=2.0'
-    mistune: '>=2.0.3,<4'
-    nbclient: '>=0.5.0'
-    nbformat: '>=5.7'
-    packaging: '*'
-    pandocfilters: '>=1.4.1'
-    pygments: '>=2.4.1'
-    tinycss2: '*'
-    traitlets: '>=5.1'
-  url: https://files.pythonhosted.org/packages/b8/bb/bb5b6a515d1584aa2fd89965b11db6632e4bdc69495a52374bcc36e56cfa/nbconvert-7.16.4-py3-none-any.whl
-  hash:
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-  category: main
-  optional: false
diff --git a/environment.yml b/environment.yml
deleted file mode 100644
index 4c0b246..0000000
--- a/environment.yml
+++ /dev/null
@@ -1,69 +0,0 @@
-name: cryocloud
-
-channels:
-  - conda-forge
-  - nodefaults
-
-dependencies:
-  - python~=3.11.0
-  # Required until https://github.com/jupyterhub/repo2docker/pull/1196 is merged
-  - jupyterhub-singleuser~=4.0.1
-  # nbgitpuller is very helpful when distributing user content
-  - nbgitpuller~=1.2.0
-  # Specify major version of jupyterlab to use. Manually bump it when you want to upgrade
-  # jupyterlab version
-  - jupyterlab>=4.0,<4.1
-  # This provides memory usage stats on JupyterLab and classic notebook
-  - jupyter-resource-usage~=1.0.1
-  # https://syncthing.net/ provides a dropbox-like interface for syncing directories across users,
-  # hubs and machines. Used along with `jupyter-syncthing-proxy`.
-  - jupyter-syncthing-proxy==1.0.3
-  - syncthing~=1.22.1
-  # gh-scoped-creds allows users to securely push to GitHub from their repo.
-  # https://blog.jupyter.org/securely-pushing-to-github-from-a-jupyterhub-3ee42dfdc54f has
-  # some more information
-  - gh-scoped-creds==4.1
-  # More git tools from github-cli
-  - gh~=2.32.1
-
-  # VS Code support
-  - jupyter-vscode-proxy~=0.5
-  - code-server~=4.23
-
-  # Jupyter tools
-  - ipython~=8.17
-  - ipywidgets~=8.1.1
-  - jupyter-ai~=2.20
-  - jupyter-book~=1.0.0
-  # - jupyter-collaboration~=2.0.1
-  - jupyter-offlinenotebook~=0.3.1
-  - jupyter-sshd-proxy~=0.2
-  - jupyterlab-favorites~=3.2.1
-  - jupyterlab-geojson~=3.4.0
-  - jupyterlab-git~=0.50.0
-  - jupyterlab-h5web~=11.1.0
-  - jupyterlab-myst~=2.4.2
-  - jupyterlab_pygments~=0.3.0 # To bring extension up-to-date
-  - jupytext~=1.16.1
-  - nbdime~=4.0.1
-  # JupyterBook Addons
-  - sphinx~=7.3
-  - sphinxcontrib-bibtex
-  # Interactive apps
-  - itables~=2.1
-  - voila~=0.5
-
-  # Resolves warning "No ICDs were found": https://github.com/CryoInTheCloud/hub-image/issues/50
-  - ocl-icd-system
-  # needed for Linux desktop to work
-  - websockify>=0.10
-  # Includes new subcommands (`switch` & `restore`) and vulnerability fixes
-  # over the version available via ubuntu sources
-  - git>=2.39
-
-  # Desktop server
-  # Not all packages will be available from conda-forge, we install from pip when we need to.
-  - pip~=23.3.2
-  - pip:
-    # Access linux desktop from inside JupyterHub
-    - jupyter-desktop-server==0.1.3