++ date +%s
+ echo -n ' 1711126067,'
++ date
+ echo 'Compile started:  ' Fri Mar 22 11:47:47 CDT 2024
+ /work2/09221/odoty/frontera/miniconda3/ufs-coastal/tests/compile.sh frontera '-DAPP=CSTLS -DUSE_ATMOS=ON -DNO_PARMETIS=OFF -DOLDIO=ON' 11_intel intel
+ SECONDS=0
++ uname -s
+ [[ Linux == Darwin ]]
++++ readlink -f -n /work2/09221/odoty/frontera/miniconda3/ufs-coastal/tests/compile.sh
+++ dirname /work2/09221/odoty/frontera/miniconda3/ufs-coastal/tests/compile.sh
++ cd /work2/09221/odoty/frontera/miniconda3/ufs-coastal/tests
++ pwd -P
+ readonly MYDIR=/work2/09221/odoty/frontera/miniconda3/ufs-coastal/tests
+ MYDIR=/work2/09221/odoty/frontera/miniconda3/ufs-coastal/tests
+ readonly ARGC=4
+ ARGC=4
+ [[ 4 -lt 2 ]]
+ MACHINE_ID=frontera
+ MAKE_OPT='-DAPP=CSTLS -DUSE_ATMOS=ON -DNO_PARMETIS=OFF -DOLDIO=ON'
+ COMPILE_NR=_11_intel
+ RT_COMPILER=intel
+ clean_before=YES
+ clean_after=YES
+ BUILD_NAME=fv3_11_intel
+ PATHTR=/work2/09221/odoty/frontera/miniconda3/ufs-coastal
++ pwd
+ BUILD_DIR=/scratch1/09221/odoty/frontera/odoty/FV3_RT/rt_75079/compile_11_intel/build_fv3_11_intel
+ [[ frontera == derecho ]]
+ BUILD_JOBS=8
+ hostname
+ set +x

Due to MODULEPATH changes, the following have been reloaded:
  1) ufs_common     2) ufs_frontera.intel


Currently Loaded Modules:
  1) autotools/1.2               25) parallel-netcdf/1.12.2
  2) hwloc/1.11.12               26) parallelio/2.5.10
  3) xalt/2.10.34                27) esmf/8.5.0
  4) TACC                        28) fms/2023.02.01
  5) qt5/5.14.2                  29) bacio/2.4.1
  6) miniconda/3.9.12            30) crtm-fix/2.4.0_emc
  7) ecflow/5.8.4                31) git-lfs/2.10.0
  8) intel/19.1.1                32) crtm/2.4.0
  9) stack-intel/19.1.1.217      33) g2/3.4.5
 10) impi/19.0.9                 34) g2tmpl/1.10.2
 11) stack-intel-mpi/2020.4.304  35) ip/4.3.0
 12) cmake/3.24.2                36) sp/2.3.3
 13) libjpeg/2.1.0               37) w3emc/2.10.0
 14) jasper/2.0.32               38) gftl/1.10.0
 15) zlib/1.2.13                 39) gftl-shared/1.6.1
 16) libpng/1.6.37               40) fargparse/1.5.0
 17) pkg-config/0.27.1           41) mapl/2.40.3-esmf-8.5.0
 18) hdf5/1.14.0                 42) scotch/7.0.4
 19) snappy/1.1.10               43) ufs_common
 20) zstd/1.5.2                  44) stack-python/3.9.12
 21) c-blosc/1.21.4              45) ufs_frontera.intel
 22) curl/7.29.0                 46) git/2.24.1
 23) netcdf-c/4.9.2              47) python3/3.7.0
 24) netcdf-fortran/4.6.0

 

+ echo 'Compiling -DAPP=CSTLS -DUSE_ATMOS=ON -DNO_PARMETIS=OFF -DOLDIO=ON into fv3_11_intel.exe on frontera'
+ CMAKE_FLAGS='-DAPP=CSTLS -DUSE_ATMOS=ON -DNO_PARMETIS=OFF -DOLDIO=ON'
+ CMAKE_FLAGS+=' -DMPI=ON'
+ [[ -DAPP=CSTLS -DUSE_ATMOS=ON -DNO_PARMETIS=OFF -DOLDIO=ON == *-DDEBUG=ON* ]]
+ CMAKE_FLAGS+=' -DCMAKE_BUILD_TYPE=Release'
+ [[ frontera == jet ]]
+ set +ex
+ [[ -DAPP=CSTLS -DUSE_ATMOS=ON -DNO_PARMETIS=OFF -DOLDIO=ON == *\-\D\A\P\P\=\S\2\S* ]]
+ [[ -DAPP=CSTLS -DUSE_ATMOS=ON -DNO_PARMETIS=OFF -DOLDIO=ON == *\-\D\A\P\P\=\N\G\-\G\O\D\A\S* ]]
++ trim '-DAPP=CSTLS -DUSE_ATMOS=ON -DNO_PARMETIS=OFF -DOLDIO=ON -DMPI=ON -DCMAKE_BUILD_TYPE=Release'
++ local 'var=-DAPP=CSTLS -DUSE_ATMOS=ON -DNO_PARMETIS=OFF -DOLDIO=ON -DMPI=ON -DCMAKE_BUILD_TYPE=Release'
++ var='-DAPP=CSTLS -DUSE_ATMOS=ON -DNO_PARMETIS=OFF -DOLDIO=ON -DMPI=ON -DCMAKE_BUILD_TYPE=Release'
++ var='-DAPP=CSTLS -DUSE_ATMOS=ON -DNO_PARMETIS=OFF -DOLDIO=ON -DMPI=ON -DCMAKE_BUILD_TYPE=Release'
++ echo -n '-DAPP=CSTLS -DUSE_ATMOS=ON -DNO_PARMETIS=OFF -DOLDIO=ON -DMPI=ON -DCMAKE_BUILD_TYPE=Release'
+ CMAKE_FLAGS='-DAPP=CSTLS -DUSE_ATMOS=ON -DNO_PARMETIS=OFF -DOLDIO=ON -DMPI=ON -DCMAKE_BUILD_TYPE=Release'
+ echo 'CMAKE_FLAGS = -DAPP=CSTLS -DUSE_ATMOS=ON -DNO_PARMETIS=OFF -DOLDIO=ON -DMPI=ON -DCMAKE_BUILD_TYPE=Release'
+ '[' YES = YES ']'
+ rm -rf /scratch1/09221/odoty/frontera/odoty/FV3_RT/rt_75079/compile_11_intel/build_fv3_11_intel
+ export BUILD_VERBOSE=1
+ BUILD_VERBOSE=1
+ export BUILD_DIR
+ export BUILD_JOBS
+ export CMAKE_FLAGS
+ bash -x /work2/09221/odoty/frontera/miniconda3/ufs-coastal/build.sh
+ LMOD_CMD=/opt/apps/lmod/lmod/libexec/lmod
+ LMOD_DIR=/opt/apps/lmod/lmod/libexec
+ '[' : '!=' : ']'
+ set -eu
++ uname -s
+ [[ Linux == Darwin ]]
++++ readlink -f -n /work2/09221/odoty/frontera/miniconda3/ufs-coastal/build.sh
+++ dirname /work2/09221/odoty/frontera/miniconda3/ufs-coastal/build.sh
++ cd /work2/09221/odoty/frontera/miniconda3/ufs-coastal
++ pwd -P
+ readonly UFS_MODEL_DIR=/work2/09221/odoty/frontera/miniconda3/ufs-coastal
+ UFS_MODEL_DIR=/work2/09221/odoty/frontera/miniconda3/ufs-coastal
+ export CC=mpiicc
+ CC=mpiicc
+ export CXX=mpiicpc
+ CXX=mpiicpc
+ export FC=mpiifort
+ FC=mpiifort
+ BUILD_DIR=/scratch1/09221/odoty/frontera/odoty/FV3_RT/rt_75079/compile_11_intel/build_fv3_11_intel
+ mkdir -p /scratch1/09221/odoty/frontera/odoty/FV3_RT/rt_75079/compile_11_intel/build_fv3_11_intel
+ cd /scratch1/09221/odoty/frontera/odoty/FV3_RT/rt_75079/compile_11_intel/build_fv3_11_intel
+ cmake /work2/09221/odoty/frontera/miniconda3/ufs-coastal -DAPP=CSTLS -DUSE_ATMOS=ON -DNO_PARMETIS=OFF -DOLDIO=ON -DMPI=ON -DCMAKE_BUILD_TYPE=Release

Configuring UFS app in COASTAL with SCHISM model

FMS .............. ON
FV3 .............. OFF
AQM .............. OFF
GOCART ........... OFF
MOM6 ............. OFF
HYCOM ............ OFF
CICE6 ............ OFF
WW3 .............. OFF
STOCH_PHYS ....... OFF
CDEPS ............ ON
CMEPS ............ ON
NOAHMP ........... OFF
ADCIRC ........... OFF
FVCOM ............ OFF
SCHISM ........... ON
ROMS ............. OFF
PAHM ............. OFF

Platform 'frontera.intel' configuration file does not exist

32BIT ............ OFF
CCPP_32BIT ....... OFF
AVX2 ............. ON
SIMDMULTIARCH .... OFF
DEBUG ............ OFF
INLINE_POST ...... ON
MULTI_GASES ...... OFF
MOVING_NEST ...... OFF
REGIONAL_MOM6..... OFF
OPENMP ........... ON
PARALLEL_NETCDF .. OFF
JEDI_DRIVER ...... OFF
CMEPS_AOFLUX ..... OFF
CDEPS_INLINE ..... OFF

CMake Error at CMakeLists.txt:157 (find_package):
  By not providing "FindNetCDF.cmake" in CMAKE_MODULE_PATH this project has
  asked CMake to find a package configuration file provided by "NetCDF", but
  CMake did not find one.

  Could not find a package configuration file provided by "NetCDF" (requested
  version 4.7.4) with any of the following names:

    NetCDFConfig.cmake
    netcdf-config.cmake

  Add the installation prefix of "NetCDF" to CMAKE_PREFIX_PATH or set
  "NetCDF_DIR" to a directory containing one of the above files.  If "NetCDF"
  provides a separate development package or SDK, be sure it has been
  installed.