From 21f03d72830807a674d3ea9350ee8e6a1fa0d2f2 Mon Sep 17 00:00:00 2001 From: Syphax Bouazzouni Date: Thu, 15 Jun 2023 04:04:29 +0200 Subject: [PATCH] fix ontology submission yaml file syntax issues --- config/schemes/ontology_submission.yml | 280 ++++++++++--------------- 1 file changed, 110 insertions(+), 170 deletions(-) diff --git a/config/schemes/ontology_submission.yml b/config/schemes/ontology_submission.yml index 8ee1b44e..3b5db927 100644 --- a/config/schemes/ontology_submission.yml +++ b/config/schemes/ontology_submission.yml @@ -111,8 +111,7 @@ numberOfIndividuals: metadataMappings: [ "mod:noOfIndividuals" ] description: [ "MOD: The total number of individuals in an ontology.", "OMV: Number of individuals in the ontology.", - "VOID: The total number of entities that are described in a void:Dataset. -" ] + "VOID: The total number of entities that are described in a void:Dataset." ] display: "metrics" helpText: "Number of individuals in this ontology. Automatically computed by OWLAPI." label: "Number of individuals" @@ -122,8 +121,7 @@ numberOfProperties: description: [ "MOD: The total number of properties in an ontology.", "OMV: Number of properties in the ontology.", "VOAF: The number of properties defined in the vocabulary namespace. Properties imported from other namespaces are not taken into account.", - "VOID: The total number of distinct properties in a void:Dataset. In other words, the number of distinct resources that occur in the predicate position of triples in the dataset. -" ] + "VOID: The total number of distinct properties in a void:Dataset. In other words, the number of distinct resources that occur in the predicate position of triples in the dataset." ] display: "metrics" helpText: "Number of properties in this ontology. Automatically computed by OWLAPI." label: "Number of properties" @@ -145,7 +143,6 @@ entities: label: "Number of entities" display: "metrics" helpText: "Number of entities in this ontology." - label: "Number of individuals" numberOfAxioms: extractedMetadata: true @@ -188,8 +185,7 @@ knownUsage: notes: extractedMetadata: true description: [ "RDFS: A description of the subject resource.", - "OMV: Additional information about the ontology that is not included somewhere else (e.g. information that you do not want to include in the documentation). -" ] + "OMV: Additional information about the ontology that is not included somewhere else (e.g. information that you do not want to include in the documentation)." ] metadataMappings: [ "rdfs:comment", "adms:versionNotes" ] helpText: "Additional information about the ontology that is not included somewhere else (e.g. information that you do not want to include in the documentation)." label: "Notes" @@ -198,9 +194,7 @@ conformsToKnowledgeRepresentationParadigm: extractedMetadata: true description: [ "MOD: A representation formalism that is followed to describe knowledge in an ontology. Example includes description logics, first order logic, etc.", "OMV: Information about the paradigm model used to create the ontology.", - "DCTERMS: An established standard to which the described resource conforms. - -" ] + "DCTERMS: An established standard to which the described resource conforms." ] metadataMappings: [ "mod:KnowledgeRepresentationFormalism", "dct:conformsTo" ] display: "methodology" helpText: "A representation formalism that is followed to describe knowledge in an ontology. Example includes description logics, first order logic, etc." @@ -214,8 +208,7 @@ hasContributor: "PAV: The resource was contributed to by the given agent.", "SCHEMA: A secondary contributor to the CreativeWork or Event.", "DOAP: Project contributor", - "OMV: Contributors to the creation of the ontology -" ] + "OMV: Contributors to the creation of the ontology" ] label: "Contributors" metadataMappings: [ "dc:contributor", "dct:contributor", "doap:helper", "schema:contributor", "pav:contributedBy" ] helpText: "Contributors to the creation of the ontology." @@ -237,8 +230,7 @@ hasCreator: designedForOntologyTask: extractedMetadata: true description: [ "DCTERMS: The purpose for which the ontology was originally designed", - "OMV: The purpose for which the ontology was originally designed. -" ] + "OMV: The purpose for which the ontology was originally designed." ] display: "usage" label: "Designed for task" helpText: "The purpose for which the ontology was originally designed." @@ -273,8 +265,7 @@ wasInvalidatedBy: curatedBy: extractedMetadata: true description: [ "PAV: Specifies an agent specialist responsible for shaping the expression in an appropriate format. Often the primary agent responsible for ensuring the quality of the representation.", - "MOD: A curator who restructure the previously authored content and shape it to be appropriate for the intended representation (e.g. by normalizing the fields for being represented in a spreadsheet). -" ] + "MOD: A curator who restructure the previously authored content and shape it to be appropriate for the intended representation (e.g. by normalizing the fields for being represented in a spreadsheet)." ] display: "people" label: "Curator" metadataMappings: [ "mod:evaluatedBy" ] @@ -285,8 +276,7 @@ endorsedBy: extractedMetadata: true label: "Endorsed by" description: [ "MOD: An ontology endorsed by an agent.", - "OMV: The parties that have expressed support or approval to this ontology. -" ] + "OMV: The parties that have expressed support or approval to this ontology." ] metadataMappings: [ "mod:endorsedBy" ] helpText: "The parties that have expressed support or approval to this ontology" display: "people" @@ -297,9 +287,7 @@ fundedBy: label: "Funded or sponsored by" description: [ "MOD: An ontology that is sponsored by and developed under a project.", "FOAF: An organization funding a project or person.", - "SCHEMA: The Organization on whose behalf the creator was working. - -" ] + "SCHEMA: The Organization on whose behalf the creator was working." ] metadataMappings: [ "mod:sponsoredBy", "schema:sourceOrganization" ] display: "people" helpText: "The organization funding the ontology development." @@ -320,9 +308,7 @@ hasDomain: "SCHEMA: The subject matter of the content.", "FOAF: A topic of some page or document.", "OMV: Typically, the domain can refer to established topic hierarchies such as the general purpose topic hierarchy DMOZ or the domain specific topic hierarchy ACM for the computer science domain", - "DCAT: A main category of the resource. - -" ] + "DCAT: A main category of the resource." ] helpText: "Typically, the domain can refer to established topic hierarchies such as the general purpose topic hierarchy DMOZ or the domain specific topic hierarchy ACM for the computer science domain" metadataMappings: [ "dc:subject", "dct:subject", "foaf:topic", "dcat:theme", "schema:about" ] display: "usage" @@ -358,9 +344,7 @@ hasLicense: "DC: Information about rights held in and over the resource.", "SCHEMA: A license document that applies to this content, typically indicated by URL.", "DCTERMS: A legal document giving official permission to do something with the resource. Recommended practice is to identify the license document with a URI. If this is not possible or feasible, a literal value that identifies the license may be provided.", - "OMV: Underlying license model. - -" ] + "OMV: Underlying license model." ] metadataMappings: [ "dc:rights", "dct:rights", "dct:license", "cc:license", "schema:license" ] helpText: "Underlying license model.<br>Consider using a <a target="_blank" href="http://rdflicense.appspot.com/">URI to describe your License</a><br>Consider using a <a target="_blank" href="http://licentia.inria.fr/">INRIA licentia</a> to choose your license" enforcedValues: { @@ -407,8 +391,7 @@ hasOntologySyntax: isOfType: extractedMetadata: true description: [ "OMV: The nature of the content of the ontology ", - "DCTERMS: The nature or genre of the resource. -" ] + "DCTERMS: The nature or genre of the resource." ] metadataMappings: [ "dc:type", "dct:type" ] label: "Generic Type" helpText: "The nature of the content of the ontology.<br>Properties taken from <a target="_blank" href="http://wiki.dublincore.org/index.php/NKOS_Vocabularies#KOS_Types_Vocabulary">DCMI KOS type vocabularies</a>" @@ -436,9 +419,7 @@ usedOntologyEngineeringTool: label: "Created With" description: [ "PAV: The software/tool used by the creator (pav:createdBy) when making the digital resource, for instance a word processor or an annotation tool.", "MOD: The tool used for the creation of an ontology.", - "OMV: Information about the tool used to create the ontology. - -" ] + "OMV: Information about the tool used to create the ontology." ] metadataMappings: [ "mod:toolUsed", "pav:createdWith", "oboInOwl:auto-generated-by" ] helpText: "Information about the tool used to create the ontology" enforcedValues: { @@ -465,9 +446,7 @@ useImports: description: [ "OWL: References another OWL ontology containing definitions, whose meaning is considered to be part of the meaning of the importing ontology.", "OMV: References another ontology metadata instance that describes an ontology containing definitions, whose meaning is considered to be part of the meaning of the ontology described by this ontology metadata instance.", "DCTERMS: A related resource that is required by the described resource to support its function, delivery, or coherence.", - "VOAF: Indicates that the subject vocabulary extends the expressivity of the object vocabulary by declaring subsumption relationships, using object vocabulary class as domain or range of a subject vocabulary property, defining local restrictions etc .... - -" ] + "VOAF: Indicates that the subject vocabulary extends the expressivity of the object vocabulary by declaring subsumption relationships, using object vocabulary class as domain or range of a subject vocabulary property, defining local restrictions etc ...." ] metadataMappings: [ "owl:imports", "door:imports", "void:vocabulary", "voaf:extends", "dct:requires", "oboInOwl:import" ] helpText: "References another ontology metadata instance that describes an ontology containing definitions, whose meaning is considered to be part of the meaning of the ontology described by this ontology metadata instance" @@ -479,8 +458,7 @@ hasPriorVersion: "DCTERMS: A related resource of which the described resource is a version, edition, or adaptation.", "PROV: A revision is a derivation for which the resulting entity is a revised version of some original. The implication here is that the resulting entity contains substantial content from the original.", "DOOR: Prior version relation from OWL.", - "ADMS: A link to the previous version of the Asset -" ] + "ADMS: A link to the previous version of the Asset" ] metadataMappings: [ "owl:priorVersion", "dct:isVersionOf", "door:priorVersion", "prov:wasRevisionOf", "adms:prev", "pav:previousVersion", "pav:hasEarlierVersion" ] helpText: "An URI to the prior version of the ontology" example: 'http://data.agroportal.lirmm.fr/ontologies/GO/submissions/208' @@ -490,8 +468,7 @@ isBackwardCompatibleWith: label: "Backward compatible" description: [ "OWL: This identifies the specified ontology as a prior version of the containing ontology, and further indicates that it is backward compatible with it.", "OMV: The ontology metadata instance which describes an ontology that is a compatible prior version of the ontology described by this ontology metadata Instance.", - "DOOR: The relation of being a compatible new version from owl -" ] + "DOOR: The relation of being a compatible new version from owl" ] metadataMappings: [ "owl:backwardCompatibleWith", "door:backwardCompatibleWith" ] display: "relations" helpText: "URI of an ontology that has its prior version compatible with the described ontology" @@ -500,9 +477,7 @@ isIncompatibleWith: extractedMetadata: true label: "Incompatible" description: [ "OWL: This indicates that the containing ontology is a later version of the referenced ontology, but is not backward compatible with it.", - "OMV: The described ontology is a later version of the ontology described by the metadata specified, but is not backward compatible with it. It can be used to explicitly state that ontology cannot upgrade to use the new version without checking whether changes are required. - -" ] + "OMV: The described ontology is a later version of the ontology described by the metadata specified, but is not backward compatible with it. It can be used to explicitly state that ontology cannot upgrade to use the new version without checking whether changes are required." ] metadataMappings: [ "owl:incompatibleWith", "door:owlIncompatibleWith" ] display: "relations" helpText: "URI of an ontology that is a prior version of this ontology, but not compatible" @@ -528,8 +503,7 @@ ontologyRelatedTo: extractedMetadata: true label: "Generally related to" description: [ "DCTERMS: A related resource", - "VOAF: Indicates that the subject vocabulary uses or extends some class or property of the object vocabulary -" ] + "VOAF: Indicates that the subject vocabulary uses or extends some class or property of the object vocabulary" ] metadataMappings: [ "dc:relation", "dct:relation", "voaf:reliesOn" ] helpText: "An ontology that uses or extends some class or property of the described ontology" @@ -545,9 +519,7 @@ similarTo: extractedMetadata: true label: "Similar to" description: [ "VOAF: Used to assert that two vocabularies are similar in scope and objectives, independently of the fact that they otherwise refer to each other.", - "DOOR: Represents the meaning of 'how an ontology overlap/cover parts of the same area of interest of another ontology. - -" ] + "DOOR: Represents the meaning of 'how an ontology overlap/cover parts of the same area of interest of another ontology." ] metadataMappings: [ "voaf:similar" ] display: "relations" helpText: "Vocabularies that are similar in scope and objectives, independently of the fact that they otherwise refer to each other." @@ -557,8 +529,7 @@ isAlignedTo: label: "Has equivalences with" description: [ "VOAF: Indicates that the subject vocabulary declares some equivalent classes or properties with the object vocabulary.", "DOOR: Links two ontologies if there exists an alignment which covers a substantial part of the vocabulary (i.e., a proportion greater than a threshold).", - "NKOS: A related resource with which the described resource is aligned. -" ] + "NKOS: A related resource with which the described resource is aligned." ] metadataMappings: [ "voaf:hasEquivalencesWith", "nkos:alignedWith" ] helpText: "Ontologies that have an alignment which covers a substantial part of the described ontology" @@ -566,8 +537,7 @@ explanationEvolution: extractedMetadata: true description: [ "DOOR: Evolution which involves only at the syntactic level.", "PROV: An entity that is a specialization of another shares all aspects of the latter, and additionally presents more specific aspects of the same thing as the latter.", - "VOAF:Indicates that the subject vocabulary defines some subclasses or subproperties of the object vocabulary, or local restrictions on those -" ] + "VOAF:Indicates that the subject vocabulary defines some subclasses or subproperties of the object vocabulary, or local restrictions on those" ] metadataMappings: [ "voaf:specializes", "prov:specializationOf" ] display: "relations" label: "Specialization of" @@ -576,8 +546,7 @@ explanationEvolution: generalizes: extractedMetadata: true description: [ "VOAF: Indicates that the subject vocabulary generalizes by some superclasses or super properties the object vocabulary.", - "PROV: Inverse property of specializationOf. -" ] + "PROV: Inverse property of specializationOf." ] display: "relations" label: "Generalization of" helpText: "Vocabulary that is generalized by some superclasses or superproperties by the described ontology" @@ -593,8 +562,7 @@ hiddenLabel: extractedMetadata: true label: "Hidden or past name" description: [ "MOD: Hidden or past name", - "SKOS: A lexical label for a resource that should be hidden when generating visual displays of the resource, but should still be accessible to free text search operations. -" ] + "SKOS: A lexical label for a resource that should be hidden when generating visual displays of the resource, but should still be accessible to free text search operations." ] helpText: "The hidden labels are useful when a user is interacting with a knowledge organization system via a text-based search function. The user may, for example, enter mis-spelled words when trying to find a relevant concept. If the mis-spelled query can be matched against a hidden label, the user will be able to find the relevant concept, but the hidden label won't otherwise be visible to the user" coverage: @@ -623,8 +591,7 @@ identifier: description: [ "DCTERMS: An unambiguous reference to the resource within a given context. Recommended practice is to identify the resource by means of a string conforming to an identification system. Examples include International Standard Book Number (ISBN), Digital Object Identifier (DOI), and Uniform Resource Name (URN). Persistent identifiers should be provided as HTTP URIs.", "SKOS: A notation is a string of characters such as\"T58.5\"or\"303.4833\"used to uniquely identify a concept within the scope of a given concept scheme.", "ADMS: adms:identifier is used to link any resource to an instance of adms:Identifier which is its range. N.B. it is not appropriate to use dcterms:identifer to link to the Identifier class as its range is rdfs:Literal. ADMS uses this to provide any identifier for the Asset.", - "SCHEMA: The identifier property represents any kind of identifier for any kind of Thing, such as ISBNs, GTIN codes, UUIDs etc. Schema.org provides dedicated properties for representing many of these, either as textual strings or as URL (URI) links. -" ] + "SCHEMA: The identifier property represents any kind of identifier for any kind of Thing, such as ISBNs, GTIN codes, UUIDs etc. Schema.org provides dedicated properties for representing many of these, either as textual strings or as URL (URI) links. " ] metadataMappings: [ "dc:identifier", "skos:notation", "adms:identifier" ] helpText: "An unambiguous reference to the ontology. Use the ontology URI if not provided in the ontology metadata." example: 'https://doi.org/10.15454/1.4690062322351956E12' @@ -636,8 +603,7 @@ source: "PROV: A derivation is a transformation of an entity into another, an update of an entity resulting in a new one, or the construction of a new entity based on a pre-existing entity.", "PROV: Influence is the capacity of an entity, activity, or agent to have an effect on the character, development, or behavior of another by means of usage, start, end, generation, invalidation, communication, derivation, attribution, association, or delegation.", "PAV: Derived from a different resource.", - "NKOS: A resource used as the source for a derivative resource. -" ] + "NKOS: A resource used as the source for a derivative resource." ] display: "links" label: "Source" metadataMappings: [ "dc:source", "prov:wasInfluencedBy", "prov:wasDerivedFrom", "pav:derivedFrom", "schema:isBasedOn", "nkos:basedOn", "mod:sourceOntology" ] @@ -654,8 +620,7 @@ alternative: description: [ "DCTERMS: An alternative name for the resource. The distinction between titles and alternative titles is application-specific.", "SKOS: The preferred and alternative labels are useful when generating or creating human-readable representations of a knowledge organization system.", "SCHEMA: An alias for the item. A short label that is used by some communities to refer to a dataset", - "IDOT: A short label that is used by some communities to refer to a dataset (see 'preferredPrefix'). -" ] + "IDOT: A short label that is used by some communities to refer to a dataset (see 'preferredPrefix')." ] label: "Alternative name" metadataMappings: [ "skos:altLabel", "idot:alternatePrefix", "schema:alternativeHeadline", "schema:alternateName" ] helpText: "An alternative title for the ontology" @@ -665,9 +630,7 @@ hasPart: label: "Has part (has views)" description: [ "DCTERMS: A related resource that is included either physically or logically in the described resource.", "SCHEMA: Indicates an item or CreativeWork that is part of this item, or CreativeWork (in some sense).", - "ADMS: Links to a sample of an Asset (which is itself an Asset) - -" ] + "ADMS: Links to a sample of an Asset (which is itself an Asset)." ] metadataMappings: [ "schema:hasPart", "oboInOwl:hasSubset", "adms:includedAsset" ] display: "relations" helpText: "A related ontology that is included either physically or logically in the described ontology." @@ -678,7 +641,7 @@ isFormatOf: description: "DCTERMS: A related resource that is substantially the same as the described resource, but in another format" display: "links" helpText: "URL to the original document that describe this ontology in a not ontological format (i.e.: the OBO original file)" - + hasFormat: extractedMetadata: true @@ -693,8 +656,7 @@ audience: label: "Audience" description: [ "DCTERMS: a class of entity for whom the resource is intended or useful (public visé ou recommandé pour la ressource).", "DOAP: Description of target user base.", - "SCHEMA: An intended audience, i.e. a group for whom something was created -" ] + "SCHEMA: An intended audience, i.e. a group for whom something was created" ] metadataMappings: [ "doap:audience", "schema:audience" ] display: "community" helpText: "Description of the target user base of the ontology." @@ -703,8 +665,7 @@ valid: extractedMetadata: true description: [ "DCTERMS: Date (often a range) of validity of a resource.", "SCHEMA: The end date and time of the item.", - "PROV: Invalidation is the start of the destruction, cessation, or expiry of an existing entity by an activity. The entity is no longer available for use (or further invalidation) after invalidation. Any generation or usage of an entity precedes its invalidation. -" ] + "PROV: Invalidation is the start of the destruction, cessation, or expiry of an existing entity by an activity. The entity is no longer available for use (or further invalidation) after invalidation. Any generation or usage of an entity precedes its invalidation." ] label: "Valid until" metadataMappings: [ "prov:invaliatedAtTime", "schema:endDate" ] display: "dates" @@ -757,9 +718,7 @@ endpoint: extractedMetadata: true label: "SPARQL endpoint" description: [ "SD: Relates an instance of sd:Service to a SPARQL endpoint that implements the SPARQL Protocol service for the service. The object of the sd:endpoint property is an IRI.", - "VOID: A SPARQL protocol endpoint that allows SPARQL query access to a void:Dataset. - -" ] + "VOID: A SPARQL protocol endpoint that allows SPARQL query access to a void:Dataset." ] metadataMappings: [ "void:sparqlEndpoint" ] display: "content" @@ -768,13 +727,10 @@ dataDump: extractedMetadata: true label: "Download URL" description: [ "DCAT: The URL of the downloadable file in a given format. E.g. CSV file or RDF file. The format is indicated by the distribution's dcterms:format and/or dcat:mediaType.", - "VOID: An RDF dump, partial or complete, of a void:Dataset.", - "DOAP: Mirror of software download web page.", - "SCHEMA: A downloadable form of this dataset, at a specific location, in a specific format. - metadataMappings: ["schema:distribution", "doap:download-mirror"] - -" ] - metadataMappings: [ "doap:download-mirror", "schema:distribution" ] + "VOID: An RDF dump, partial or complete, of a void:Dataset.", + "DOAP: Mirror of software download web page.", + "SCHEMA: A downloadable form of this dataset, at a specific location, in a specific format." ] + metadataMappings: [ "schema:distribution", "doap:download-mirror" ] display: "content" csvDump: @@ -807,9 +763,7 @@ depiction: extractedMetadata: true label: "Depiction" description: [ "FOAF: A depiction of something.", - "DOAP: Web page with screenshots of project. An image of the item. SCHEMA: An image of the item. This can be a URL or a fully described ImageObject. - -" ] + "DOAP: Web page with screenshots of project. An image of the item. SCHEMA: An image of the item. This can be a URL or a fully described ImageObject." ] metadataMappings: [ "doap:screenshots", "schema:image" ] display: "images" helpText: "The URL of an image representing the ontology." @@ -818,8 +772,7 @@ logo: extractedMetadata: true label: "Logo" description: [ "FOAF: A logo representing something.", - "SCHEMA: An associated logo. -" ] + "SCHEMA: An associated logo." ] metadataMappings: [ "schema:logo" ] display: "images" helpText: "The URL of the ontology logo." @@ -828,8 +781,7 @@ competencyQuestion: extractedMetadata: true label: "Competency question" description: [ "FOAF: A logo representing something.", - "SCHEMA: An associated logo. -" ] + "SCHEMA: An associated logo." ] display: "methodology" helpText: "A set of questions made to build an ontology at the design time." @@ -838,8 +790,7 @@ usedBy: extractedMetadata: true label: "Used by" description: [ "VOAF: Indicates that the subject vocabulary is used by the object vocabulary.", - "NKOS: Agent using the described KOS -" ] + "NKOS: Agent using the described KOS" ] display: "relations" metadataMappings: [ "nkos:usedBy" ] helpText: "Ontologies that use the described ontology." @@ -849,9 +800,7 @@ metadataVoc: description: [ "VOAF: Indicates that the subject vocabulary uses the object vocabulary in metadata at vocabulary or element level", "SCHEMA: Indicates (by URL or string) a particular version of a schema used in some CreativeWork.", "ADMS: A schema according to which the Asset Repository can provide data about its content, e.g. ADMS.", - "MOD: A vocabulary(ies) that is used and/or referred to create the current ontology. - -" ] + "MOD: A vocabulary(ies) that is used and/or referred to create the current ontology." ] display: "content" label: "Metadata vocabulary used" metadataMappings: [ "mod:vocabularyUsed", "adms:supportedSchema", "schema:schemaVersion" ] @@ -873,8 +822,7 @@ toDoList: example: extractedMetadata: true description: [ "VANN: A reference to a resource that provides an example of how this resource can be used.", - "SCHEMA: Example/instance/realization/derivation of the concept of this creative work. eg. The paperback edition, first edition, or eBook -" ] + "SCHEMA: Example/instance/realization/derivation of the concept of this creative work. eg. The paperback edition, first edition, or eBook" ] metadataMappings: [ "schema:workExample" ] display: "usage" helpText: "A reference to a resource that provides an example of how this ontology can be used." @@ -884,8 +832,7 @@ preferredNamespaceUri: extractedMetadata: true label: "Preferred namespace URI" description: [ "VANN: The preferred namespace URI to use when using terms from this vocabulary in an XML document.", - "VOID: A URI that is a common string prefix of all the entity URIs in a void:Dataset -" ] + "VOID: A URI that is a common string prefix of all the entity URIs in a void:Dataset" ] metadataMappings: [ "void:uriSpace" ] helpText: "The preferred namespace URI to use when using terms from this ontology." example: 'http://purl.obolibrary.org/obo/ENVO_' @@ -895,8 +842,7 @@ preferredNamespacePrefix: extractedMetadata: true label: "Preferred namespace prefix" description: [ "VANN: The preferred namespace prefix to use when using terms from this vocabulary in an XML document.", - "IDOT: Short label that is commonly used to refer to the dataset. Often used to identify the dataset in IRIs for specific items (or records). This may also stand in place of the base IRI of the dataset (e.g. see http://prefix.cc) -" ] + "IDOT: Short label that is commonly used to refer to the dataset. Often used to identify the dataset in IRIs for specific items (or records). This may also stand in place of the base IRI of the dataset (e.g. see http://prefix.cc)." ] metadataMappings: [ "idot:preferredPrefix", "oboInOwl:default-namespace", "oboInOwl:hasDefaultNamespace" ] helpText: "The preferred namespace prefix to use when using terms from this ontology." @@ -951,8 +897,7 @@ exampleIdentifier: extractedMetadata: false label: "Example of resource" description: [ "VOID: Example resource of dataset.", - "IDOT: An example identifier used by one item (or record) from a dataset. -" ] + "IDOT: An example identifier used by one item (or record) from a dataset." ] display: "content" helpText: "An example identifier used by one item (or record) from a dataset." @@ -984,20 +929,17 @@ workTranslation: extractedMetadata: true description: [ "MOD: A pointer to the translated ontology(ies) for an existing ontology. ", "SCHEMA: A work that is a translation of the content of this work.", - "ADMS: Links Assets that are translations of each other. -" ] + "ADMS: Links Assets that are translations of each other." ] display: "relations" helpText: "A ontology that is a translation of the content of this ontology." - metadataMappings: ["mod:translation "] + metadataMappings: [ "mod:translation " ] label: "Translated from" translationOfWork: extractedMetadata: true description: [ "SCHEMA: The work that this work has been translated from.", - "ADMS: Links Assets that are translations of each other. - -" ] + "ADMS: Links Assets that are translations of each other." ] metadataMappings: [ "adms:translation" ] helpText: "The ontology that this ontology has been translated from." label: "Translation of" @@ -1054,24 +996,24 @@ prefLabelProperty: label: "Object preferred label property" display: "Object description properties" enforcedValues: { - "http://www.w3.org/2004/02/skos/core#prefLabel" :"prefLabel", - "http://www.w3.org/2000/01/rdf-schema#label" : "label", - "http://schema.org/name" : "name", - "http://xmlns.com/foaf/0.1/name" :"name", - "http://purl.org/dc/terms/title" : "title" + "http://www.w3.org/2004/02/skos/core#prefLabel": "prefLabel", + "http://www.w3.org/2000/01/rdf-schema#label": "label", + "http://schema.org/name": "name", + "http://xmlns.com/foaf/0.1/name": "name", + "http://purl.org/dc/terms/title": "title" } - + synonymProperty: extractedMetadata: true description: "MOD: Property used to specify objects synonyms" label: "Object synonym property" display: "Object description properties" enforcedValues: { - "http://www.w3.org/2004/02/skos/core#altLabel " : "altLabel", - "http://purl.org/dc/terms/alternative ": "alternative", - "http://schema.org/alternateName": "alternativeName" + "http://www.w3.org/2004/02/skos/core#altLabel ": "altLabel", + "http://purl.org/dc/terms/alternative ": "alternative", + "http://schema.org/alternateName": "alternativeName" } - + definitionProperty: extractedMetadata: true @@ -1079,36 +1021,35 @@ definitionProperty: label: "Object definition property" display: "Object description properties" enforcedValues: { -"http://www.w3.org/2004/02/skos/core#definition" :"definition", -"http://www.w3.org/2000/01/rdf-schema#comment":"comment", -"http://purl.org/dc/terms/description ":"description", -"http://schema.org/description ":"decription" + "http://www.w3.org/2004/02/skos/core#definition": "definition", + "http://www.w3.org/2000/01/rdf-schema#comment": "comment", + "http://purl.org/dc/terms/description ": "description", + "http://schema.org/description ": "decription" } - + authorProperty: extractedMetadata: true - description: "MOD: Property used to specify objects's author" + description: "MOD: Property used to specify object's author" label: "Object author property" display: "Object description properties" enforcedValues: { -"http://purl.org/dc/elements/1.1/creator" : "creator", -"http://schema.org/author":"author", -"http://www.w3.org/ns/prov#wasAttributedTo":"wasAttributedTo", -"http://purl.org/pav/authoredBy":"authoredBy", -"http://purl.org/pav/createdBy": "createdBy", -"dcterms:creator", -"foaf:maker" + "http://purl.org/dc/elements/1.1/creator": "creator", + "http://schema.org/author": "author", + "http://www.w3.org/ns/prov#wasAttributedTo": "wasAttributedTo", + "http://purl.org/pav/authoredBy": "authoredBy", + "http://purl.org/pav/createdBy": "createdBy", + "http://xmlns.com/foaf/0.1/maker": "maker" } - + obsoleteProperty: extractedMetadata: true description: "MOD: Property used to specify obsolete objects" label: "Object obsolete property" display: "Object description properties" enforcedValues: { -"http://www.w3.org/2002/07/owl#owl:deprecated":"deprecated", -"idot:obsolete" + "http://www.w3.org/2002/07/owl#owl:deprecated": "deprecated", + "http://identifiers.org/idot/obsolete": "obsolete" } createdProperty: @@ -1117,99 +1058,98 @@ createdProperty: label: "Object creation date property" display: "Object description properties" enforcedValues: { -"http://purl.org/dc/terms/created " :"created", -"http://purl.org/dc/terms/issued ":"issued", -"http://purl.org/dc/terms/date":"date", -"http://purl.org/pav/authoredOn ":"authoredOn", -"http://purl.org/pav/contributedOn":"contributedOn", -"http://purl.org/pav/createdOn":"createdOn", -"http://www.isibang.ac.in/ns/mod/1.1/creationDate":"creationDate", -"http://schema.org/dateCreated ":"dateCreated", -"http://www.w3.org/ns/prov#generatedAtTime":"generatedAtTime" + "http://purl.org/dc/terms/created ": "created", + "http://purl.org/dc/terms/issued ": "issued", + "http://purl.org/dc/terms/date": "date", + "http://purl.org/pav/authoredOn ": "authoredOn", + "http://purl.org/pav/contributedOn": "contributedOn", + "http://purl.org/pav/createdOn": "createdOn", + "http://www.isibang.ac.in/ns/mod/1.1/creationDate": "creationDate", + "http://schema.org/dateCreated ": "dateCreated", + "http://www.w3.org/ns/prov#generatedAtTime": "generatedAtTime" } - + modifiedProperty: extractedMetadata: true description: "MOD: Property used to specify the date of modification of a class or another object in the ontology." label: "Object modification date property" display: "Object description properties" enforcedValues: { -"http://purl.org/dc/terms" , -"http://schema.org" , -"http://purl.org/dc/terms" , -"http://purl.org/pav" , -"https://omv2.sourceforge.net" + "http://purl.org/dc/terms" , + "http://schema.org" , + "http://purl.org/pav" , + "https://omv2.sourceforge.net" } - + hierarchyProperty: extractedMetadata: true description: "MOD: A property that is used to specify the hierarchy" label: "Hierarchy property" display: "Object description properties" enforcedValues: { -"https://www.w3.org/TR/rdf-schema/#ch_subclassof" : "rdfs:subClassOf", - "http://www.sparna.fr/skos/SKOS-traduction-francais.html#broader": "skos:broader" + "https://www.w3.org/TR/rdf-schema/#ch_subclassof": "rdfs:subClassOf", + "http://www.sparna.fr/skos/SKOS-traduction-francais.html#broader": "skos:broader" } - + pullLocation: extractedMetadata: true - description: ["DCAT: A URL of a resource that gives access to a distribution of the dataset. E.g. landing page, feed, SPARQL endpoint.", - "OMV: The location where the ontology can be found.", - "DOAP: Web page from which the project software can be downloaded"] + description: [ "DCAT: A URL of a resource that gives access to a distribution of the dataset. E.g. landing page, feed, SPARQL endpoint.", + "OMV: The location where the ontology can be found.", + "DOAP: Web page from which the project software can be downloaded" ] metadataMappings: [ "doap: download-page" , "dcat:accessURL" , "omv:resourceLocator" ] label: "Access URL" display: "Links" enforcedValues: { -"https://www.w3.org/TR/rdf-schema/#ch_subclassof" : "rdfs:subClassOf", - "http://www.sparna.fr/skos/SKOS-traduction-francais.html#broader": "skos:broader" + "https://www.w3.org/TR/rdf-schema/#ch_subclassof": "rdfs:subClassOf", + "http://www.sparna.fr/skos/SKOS-traduction-francais.html#broader": "skos:broader" } - + obsoleteParent: extractedMetadata: true - description: ["MOD: property used to specify the root of an obsolete branch in the ontology."] + description: [ "MOD: property used to specify the root of an obsolete branch in the ontology." ] metadataMappings: [ "doap: download-page" , "dcat:accessURL" , "omv:resourceLocator" ] label: "Root of obsolete branch" display: "Content" - } + maxDepth: extractedMetadata: true description: "MOD: Maximum depth of the hierarchy tree (BioPortal definition)." metadataMappings: "mod:maxDepth" label: "Maximum depth of the hierarchy" - display: "Mterics" - + display: "Metrics" + maxChildCount: extractedMetadata: true description: "MOD: Maximum number of children per class (BioPortal definition)." metadataMappings: "mod:maxChildCount" label: "Maximum number of children per class" - display: "Mterics" - + display: "Metrics" + averageChildCount: extractedMetadata: true description: "MOD: Average number of children per class (BioPortal definition)." metadataMappings: "mod:averageChildCount" label: "Average number of children per class" - display: "Mterics" - + display: "Metrics" + classesWithOneChild: extractedMetadata: true description: "MOD: Average number of children per class (BioPortal definition)." metadataMappings: "mod:classesWithOneChild" label: "Number of classes with a single child" - display: "Mterics" - + display: "Metrics" + classesWithMoreThan25Children: extractedMetadata: true description: "MOD: Number of classes that have more than 25 direct subclasses (BioPortal definition)." metadataMappings: "mod:classesWithMoreThan25Children" label: "Number of classes with more than 25 children" - display: "Mterics" - -classesWithNoDefinition: + display: "Metrics" + +classesWithNoDefinition: extractedMetadata: true description: "MOD: Number of classes that have no value for the definition property (BioPortal definition). For ontologies in OBO and RRF formats, the property for definition is part of the language. For OWL ontologies, the authors specify this property as part of the ontology metadata (the default is skos:definition)." metadataMappings: "mod:classesWithNoDefinition" label: "Number of classes with no definition" - display: "Mterics" + display: "Metrics"