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Make a best guess for ion channels in relevant cells #34

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travs opened this issue Jun 17, 2015 · 2 comments
Open
8 tasks

Make a best guess for ion channels in relevant cells #34

travs opened this issue Jun 17, 2015 · 2 comments

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@travs
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travs commented Jun 17, 2015

Best guesses for:

  • AS01
  • AS02
  • DA01
  • DA02
  • DB01
  • DD01
  • SMDDL
  • SMDDR

A start on this here: openworm/OpenWorm#31

@pgleeson
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As mentioned in the hackathon... might be best in the short to medium term to aim for 1 working, data constrained, canonical/generic neuron model & 1 generic muscle model & use these for all neurons/muscles in networks.

@slarson
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slarson commented Feb 14, 2017

Worth pointing out that @a-palyanov picked out the following ion channels for pharyngeal muscles (defined by NEURON models): https://github.com/openworm/pharyngeal_muscle_model/tree/master/pm3%20muscle%20%2B%20small%20current

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