diff --git a/.github/workflows/non_omv.yml b/.github/workflows/non_omv.yml index 05ce534c..f279ddc4 100644 --- a/.github/workflows/non_omv.yml +++ b/.github/workflows/non_omv.yml @@ -65,6 +65,7 @@ jobs: - name: Run test script run: | + pip install ruff ./test.sh - name: Final version info diff --git a/.gitignore b/.gitignore index 6b4a509f..5009199d 100644 --- a/.gitignore +++ b/.gitignore @@ -109,3 +109,4 @@ arm64 /examples/parametersweep/IClamp_GenericNeuronCellX__lems.xml /examples/parametersweep/LEMS_SimCanonical_X.png /examples/parametersweep/Canonical_X__lems.xml +/examples/parametersweep/average_last_1percent_GenericNeuronCellX.png diff --git a/c302/CompareMain.py b/c302/CompareMain.py index bac3fce9..5a38a06e 100644 --- a/c302/CompareMain.py +++ b/c302/CompareMain.py @@ -118,13 +118,13 @@ def getColumnsXls(fileIn): # print(indexName[c]) while curr_row < num_rows: curr_row += 1 - row = worksheet.row(curr_row) + # row = worksheet.row(curr_row) # print('Row:', curr_row) curr_cell = -1 while curr_cell < num_cells: curr_cell += 1 # Cell Types: 0=Empty, 1=Text, 2=Number, 3=Date, 4=Boolean, 5=Error, 6=Blank - cell_type = worksheet.cell_type(curr_row, curr_cell) + # cell_type = worksheet.cell_type(curr_row, curr_cell) cell_value = str(worksheet.cell_value(curr_row, curr_cell)) # print(' ', cell_type, ':', cell_value) cols[indexName[curr_cell]] += [cell_value] @@ -256,10 +256,11 @@ def matchLists(cols1, cols2, indexName1, indexName2): # 'R', 'Rp', 'S', 'Sp' map to 'Send'. # 'NMJ' does not map. def typeMapping(cols1, cols2, indexName1, indexName2): - list1 = ["GapJunction", "Send"] - list2 = ["EJ", "NMJ", "R", "Rp", "S", "Sp"] - type1 = cols1[indexName1[2]] - type2 = cols2[indexName2[2]] + # list1 = ["GapJunction", "Send"] + # list2 = ["EJ", "NMJ", "R", "Rp", "S", "Sp"] + # type1 = cols1[indexName1[2]] + # type2 = cols2[indexName2[2]] + pass if __name__ == "__main__": diff --git a/c302/NeuroMLUtilities.py b/c302/NeuroMLUtilities.py index 37db9aa7..ed31fae3 100644 --- a/c302/NeuroMLUtilities.py +++ b/c302/NeuroMLUtilities.py @@ -43,7 +43,7 @@ def fract(a, b, f): if __name__ == "__main__": - from SpreadsheetDataReader import read_data, read_muscle_data + # from SpreadsheetDataReader import read_data, read_muscle_data from WormNeuroAtlasReader import read_data, read_muscle_data cells, neuron_conns = read_data(include_nonconnected_cells=True) diff --git a/c302/OpenWormReader.py b/c302/OpenWormReader.py index 933829c3..28f12096 100644 --- a/c302/OpenWormReader.py +++ b/c302/OpenWormReader.py @@ -11,7 +11,7 @@ from owmeta.neuron import Neuron from owmeta.muscle import BodyWallMuscle from owmeta.worm import Worm -except: +except Exception: print("owmeta not installed! Cannot run OpenWormReader") exit() @@ -41,7 +41,7 @@ def read_data(self, include_nonconnected_cells=False): try: cell_names, pre, post, conns = self._read_connections("neuron") - except: + except Exception: print( "\nProblem loading connections via owmeta! The package is installed however. You may need to try running:" + "\n\n owm bundle remote --user add ow 'https://raw.githubusercontent.com/openworm/owmeta-bundles/master/index.json'\n" @@ -158,7 +158,7 @@ def format_muscle_name(muscle_name): exit() conn_map_OWR = {} - for c in conns: + for c in neuron_conns: conn_map_OWR[c.short().lower()] = c from c302.UpdatedSpreadsheetDataReader import read_data as read_data_usr diff --git a/c302/SpreadsheetDataReader.py b/c302/SpreadsheetDataReader.py index e8c2348c..1af89076 100644 --- a/c302/SpreadsheetDataReader.py +++ b/c302/SpreadsheetDataReader.py @@ -12,13 +12,13 @@ from c302.ConnectomeReader import ConnectionInfo from c302.ConnectomeReader import analyse_connections +from c302 import print_ from xlrd import open_workbook import os spreadsheet_location = os.path.dirname(os.path.abspath(__file__)) + "/data/" -from c302 import print_ READER_DESCRIPTION = ( """Data extracted from CElegansNeuronTables.xls for neuronal connectivity""" diff --git a/c302/__init__.py b/c302/__init__.py index 4ab74976..83ec8a02 100755 --- a/c302/__init__.py +++ b/c302/__init__.py @@ -23,7 +23,7 @@ import neuroml.writers as writers import neuroml.loaders as loaders -import c302.bioparameters +# import c302.bioparameters import airspeed @@ -39,6 +39,7 @@ import json + import collections try: @@ -51,13 +52,14 @@ from owmeta.muscle import Muscle owmeta_installed = True -except: + +except Exception: print("owmeta not installed! Proceeding anyway...") owmeta_installed = False try: from urllib2 import URLError # Python 2 -except: +except Exception: from urllib.error import URLError # Python 3 logging.basicConfig() @@ -519,7 +521,7 @@ def _get_cell_info(bnd, cells): all_muscle_info = collections.OrderedDict() if bnd is None: - if cached_owmeta_data == None: + if cached_owmeta_data is None: print_("Loading owmeta cached data from: %s" % OWMETA_CACHED_DATA_FILE) with open(OWMETA_CACHED_DATA_FILE) as f: cached_owmeta_data = json.load(f) @@ -1730,10 +1732,15 @@ def parse_dict_arg(dict_arg): def main(): + import importlib + print("Starting c302 v%s..." % __version__) args = process_args() - exec("from c302.%s import ParameterisedModel" % args.parameters, globals()) + ParameterisedModel = getattr( + importlib.import_module("c302.%s" % args.parameters), + "ParameterisedModel", + ) params = ParameterisedModel() generate( args.reference, diff --git a/c302/__version__.py b/c302/__version__.py index 3e2f46a3..d69d16e9 100644 --- a/c302/__version__.py +++ b/c302/__version__.py @@ -1 +1 @@ -__version__ = "0.9.0" +__version__ = "0.9.1" diff --git a/c302/analyse.py b/c302/analyse.py index 90fdfd4f..960cf461 100644 --- a/c302/analyse.py +++ b/c302/analyse.py @@ -1,6 +1,5 @@ import sys import matplotlib.pyplot as plt -from pylab import * fig = plt.figure(facecolor="#FFFFFF", edgecolor="#FFFFFF") diff --git a/c302/c302_FW.py b/c302/c302_FW.py index b6e1aef4..b1128f44 100644 --- a/c302/c302_FW.py +++ b/c302/c302_FW.py @@ -1,5 +1,6 @@ import sys import os +import importlib sys.path.insert(0, os.path.abspath(".")) @@ -21,7 +22,10 @@ def setup( verbose=True, config_param_overrides={}, ): - exec("from c302.parameters_%s import ParameterisedModel" % parameter_set, globals()) + ParameterisedModel = getattr( + importlib.import_module("c302.parameters_%s" % parameter_set), + "ParameterisedModel", + ) params = ParameterisedModel() params.set_bioparameter( @@ -34,13 +38,14 @@ def setup( "unphysiological_offset_current_dur", "2000 ms", "Testing TapWithdrawal", "0" ) + """ VA_motors = ["VA%s" % c for c in range_incl(1, 12)] - VB_motors = ["VB%s" % c for c in range_incl(1, 11)] DA_motors = ["DA%s" % c for c in range_incl(1, 9)] + AS_motors = ["AS%s" % c for c in range_incl(1, 11)]""" + VB_motors = ["VB%s" % c for c in range_incl(1, 11)] DB_motors = ["DB%s" % c for c in range_incl(1, 7)] DD_motors = ["DD%s" % c for c in range_incl(1, 6)] VD_motors = ["VD%s" % c for c in range_incl(1, 13)] - AS_motors = ["AS%s" % c for c in range_incl(1, 11)] cells = list(["AVBL", "AVBR"] + DB_motors + VD_motors + VB_motors + DD_motors) diff --git a/c302/c302_Full.py b/c302/c302_Full.py index 4e605321..cac1de50 100644 --- a/c302/c302_Full.py +++ b/c302/c302_Full.py @@ -1,6 +1,8 @@ import c302 import sys +import importlib + def setup( parameter_set, @@ -14,7 +16,10 @@ def setup( config_param_overrides={}, verbose=True, ): - exec("from c302.parameters_%s import ParameterisedModel" % parameter_set, globals()) + ParameterisedModel = getattr( + importlib.import_module("c302.parameters_%s" % parameter_set), + "ParameterisedModel", + ) params = ParameterisedModel() # Some random set of neurons diff --git a/c302/c302_IClamp.py b/c302/c302_IClamp.py index b85b5f40..2d62713d 100644 --- a/c302/c302_IClamp.py +++ b/c302/c302_IClamp.py @@ -2,6 +2,8 @@ import sys import neuroml.writers as writers +import importlib + def setup( parameter_set, @@ -17,11 +19,14 @@ def setup( reference = "c302_%s_IClamp" % parameter_set c302.print_("Setting up %s" % reference) - exec("from c302.parameters_%s import ParameterisedModel" % parameter_set, globals()) + ParameterisedModel = getattr( + importlib.import_module("c302.parameters_%s" % parameter_set), + "ParameterisedModel", + ) params = ParameterisedModel() stim_amplitudes = ["1pA", "2pA", "3pA", "4pA", "5pA", "6pA"] - if duration == None: + if duration is None: duration = (len(stim_amplitudes)) * 1000 my_cells = ["ADAL", "PVCL"] diff --git a/c302/c302_IClampMuscle.py b/c302/c302_IClampMuscle.py index f860c8d3..342f2b33 100644 --- a/c302/c302_IClampMuscle.py +++ b/c302/c302_IClampMuscle.py @@ -1,6 +1,8 @@ import c302 import sys +import importlib + def setup( parameter_set, @@ -12,7 +14,10 @@ def setup( param_overrides={}, verbose=True, ): - exec("from c302.parameters_%s import ParameterisedModel" % parameter_set, globals()) + ParameterisedModel = getattr( + importlib.import_module("c302.parameters_%s" % parameter_set), + "ParameterisedModel", + ) params = ParameterisedModel() my_cells = [] diff --git a/c302/c302_MultiSyns.py b/c302/c302_MultiSyns.py index 676c49ed..c34c7bad 100644 --- a/c302/c302_MultiSyns.py +++ b/c302/c302_MultiSyns.py @@ -1,14 +1,18 @@ -from c302 import generate, add_new_input +from c302 import generate, add_new_input, print_ import neuroml.writers as writers +import importlib import sys if __name__ == "__main__": parameter_set = sys.argv[1] if len(sys.argv) == 2 else "A" - exec("from c302.parameters_%s import ParameterisedModel" % parameter_set, globals()) + ParameterisedModel = getattr( + importlib.import_module("c302.parameters_%s" % parameter_set), + "ParameterisedModel", + ) params = ParameterisedModel() cells = ["URYDL", "SMDDR", "ADAL", "RIML", "IL2VL", "RIPL"] @@ -26,7 +30,7 @@ duration=1000, dt=0.1, target_directory=target_directory, - verbose=verbose, + verbose=True, ) stim_amplitude = "0.35nA" @@ -39,4 +43,4 @@ nml_doc, nml_file ) # Write over network file written above... - c302.print_("(Re)written network file to: " + nml_file) + print_("(Re)written network file to: " + nml_file) diff --git a/c302/c302_MuscleTest.py b/c302/c302_MuscleTest.py index 559bab90..950cf17e 100644 --- a/c302/c302_MuscleTest.py +++ b/c302/c302_MuscleTest.py @@ -1,5 +1,6 @@ import sys import os +import importlib sys.path.insert(0, os.path.abspath(".")) @@ -21,7 +22,10 @@ def setup( verbose=True, config_param_overrides={}, ): - exec("from c302.parameters_%s import ParameterisedModel" % parameter_set, globals()) + ParameterisedModel = getattr( + importlib.import_module("c302.parameters_%s" % parameter_set), + "ParameterisedModel", + ) params = ParameterisedModel() params.set_bioparameter( @@ -34,13 +38,14 @@ def setup( "unphysiological_offset_current_dur", "2000 ms", "Testing TapWithdrawal", "0" ) + """ VA_motors = ["VA%s" % c for c in range_incl(1, 12)] VB_motors = ["VB%s" % c for c in range_incl(1, 11)] DA_motors = ["DA%s" % c for c in range_incl(1, 9)] DB_motors = ["DB%s" % c for c in range_incl(1, 7)] DD_motors = ["DD%s" % c for c in range_incl(1, 6)] VD_motors = ["VD%s" % c for c in range_incl(1, 13)] - AS_motors = ["AS%s" % c for c in range_incl(1, 11)] + AS_motors = ["AS%s" % c for c in range_incl(1, 11)]""" cells = [] @@ -75,7 +80,7 @@ def setup( "ca_conc_rho_muscle": "0.002138919 mol_per_m_per_A_per_s", } - end = "%sms" % (int(duration) - 100) + # end = "%sms" % (int(duration) - 100) input_list = [] @@ -174,4 +179,4 @@ def setup( if len(sys.argv) == 3: setup_kwargs["data_reader"] = sys.argv[2] - setup(parameter_set, generate=True, data_reader=data_reader) + # setup(parameter_set, generate=True, data_reader=data_reader) diff --git a/c302/c302_Muscles.py b/c302/c302_Muscles.py index 829415e9..ee624555 100644 --- a/c302/c302_Muscles.py +++ b/c302/c302_Muscles.py @@ -1,6 +1,8 @@ import c302 import sys +import importlib + def setup( parameter_set, @@ -13,7 +15,10 @@ def setup( config_param_overrides={}, verbose=True, ): - exec("from c302.parameters_%s import ParameterisedModel" % parameter_set, globals()) + ParameterisedModel = getattr( + importlib.import_module("c302.parameters_%s" % parameter_set), + "ParameterisedModel", + ) params = ParameterisedModel() params.set_bioparameter( diff --git a/c302/c302_MusclesSine.py b/c302/c302_MusclesSine.py index 14eaa4bf..0a95ce81 100644 --- a/c302/c302_MusclesSine.py +++ b/c302/c302_MusclesSine.py @@ -1,5 +1,6 @@ import c302 import sys +import importlib def setup( @@ -13,7 +14,10 @@ def setup( config_param_overrides={}, verbose=True, ): - exec("from c302.parameters_%s import ParameterisedModel" % parameter_set, globals()) + ParameterisedModel = getattr( + importlib.import_module("c302.parameters_%s" % parameter_set), + "ParameterisedModel", + ) params = ParameterisedModel() params.set_bioparameter( diff --git a/c302/c302_Oscillator.py b/c302/c302_Oscillator.py index d9a228ba..a072ef7d 100644 --- a/c302/c302_Oscillator.py +++ b/c302/c302_Oscillator.py @@ -1,5 +1,6 @@ import c302 import sys +import importlib def setup( @@ -13,7 +14,10 @@ def setup( config_param_overrides={}, verbose=True, ): - exec("from c302.parameters_%s import ParameterisedModel" % parameter_set, globals()) + ParameterisedModel = getattr( + importlib.import_module("c302.parameters_%s" % parameter_set), + "ParameterisedModel", + ) params = ParameterisedModel() params.set_bioparameter("unphysiological_offset_current", "4pA", "Testing Osc", "0") diff --git a/c302/c302_OscillatorM.py b/c302/c302_OscillatorM.py index 0746e939..00189354 100644 --- a/c302/c302_OscillatorM.py +++ b/c302/c302_OscillatorM.py @@ -1,5 +1,6 @@ import c302 import sys +import importlib def setup( @@ -13,7 +14,10 @@ def setup( config_param_overrides={}, verbose=True, ): - exec("from c302.parameters_%s import ParameterisedModel" % parameter_set, globals()) + ParameterisedModel = getattr( + importlib.import_module("c302.parameters_%s" % parameter_set), + "ParameterisedModel", + ) params = ParameterisedModel() params.set_bioparameter( diff --git a/c302/c302_Pharyngeal.py b/c302/c302_Pharyngeal.py index 3a934982..9392de49 100644 --- a/c302/c302_Pharyngeal.py +++ b/c302/c302_Pharyngeal.py @@ -1,5 +1,6 @@ import c302 import sys +import importlib def setup( @@ -13,7 +14,10 @@ def setup( config_param_overrides={}, verbose=True, ): - exec("from c302.parameters_%s import ParameterisedModel" % parameter_set, globals()) + ParameterisedModel = getattr( + importlib.import_module("c302.parameters_%s" % parameter_set), + "ParameterisedModel", + ) params = ParameterisedModel() params.set_bioparameter( diff --git a/c302/c302_RIA.py b/c302/c302_RIA.py index b8709a03..80349871 100644 --- a/c302/c302_RIA.py +++ b/c302/c302_RIA.py @@ -1,6 +1,7 @@ import c302 import sys import neuroml.writers as writers +import importlib def setup( @@ -13,7 +14,10 @@ def setup( param_overrides={}, verbose=True, ): - exec("from c302.parameters_%s import ParameterisedModel" % parameter_set, globals()) + ParameterisedModel = getattr( + importlib.import_module("c302.parameters_%s" % parameter_set), + "ParameterisedModel", + ) params = ParameterisedModel() my_cells = ["RIAL", "RIAR", "SMDDL", "SMDVL"] diff --git a/c302/c302_Social.py b/c302/c302_Social.py index 554984c8..bd48e250 100644 --- a/c302/c302_Social.py +++ b/c302/c302_Social.py @@ -14,6 +14,7 @@ import neuroml.writers as writers import sys +import importlib def setup( @@ -27,7 +28,10 @@ def setup( config_param_overrides={}, verbose=True, ): - exec("from c302.parameters_%s import ParameterisedModel" % parameter_set, globals()) + ParameterisedModel = getattr( + importlib.import_module("c302.parameters_%s" % parameter_set), + "ParameterisedModel", + ) params = ParameterisedModel() cells = ["RMGR", "ASHR", "ASKR", "AWBR", "IL2R", "RMHR", "URXR"] diff --git a/c302/c302_Syns.py b/c302/c302_Syns.py index 4f86c54b..befeed8d 100644 --- a/c302/c302_Syns.py +++ b/c302/c302_Syns.py @@ -1,6 +1,7 @@ import c302 import sys import neuroml.writers as writers +import importlib def setup( @@ -14,7 +15,10 @@ def setup( config_param_overrides={}, verbose=True, ): - exec("from c302.parameters_%s import ParameterisedModel" % parameter_set, globals()) + ParameterisedModel = getattr( + importlib.import_module("c302.parameters_%s" % parameter_set), + "ParameterisedModel", + ) params = ParameterisedModel() stim_amplitudes = ["1pA", "5pA"] diff --git a/c302/c302_TapWithdrawal.py b/c302/c302_TapWithdrawal.py index ee508ade..b190968f 100644 --- a/c302/c302_TapWithdrawal.py +++ b/c302/c302_TapWithdrawal.py @@ -6,6 +6,7 @@ import c302 import sys +import importlib import neuroml.writers as writers @@ -23,7 +24,10 @@ def setup( config_param_overrides={}, verbose=True, ): - exec("from c302.parameters_%s import ParameterisedModel" % parameter_set, globals()) + ParameterisedModel = getattr( + importlib.import_module("c302.parameters_%s" % parameter_set), + "ParameterisedModel", + ) params = ParameterisedModel() params.set_bioparameter( @@ -62,7 +66,7 @@ def setup( "ALML", "ALMR", ] - TW_sensory = ["PLML", "PLMR", "AVM", "ALML", "ALMR"] + # TW_sensory = ["PLML", "PLMR", "AVM", "ALML", "ALMR"] all_motors = list( VA_motors + VB_motors @@ -421,7 +425,7 @@ def setup( verbose=verbose, ) - stim_amplitude = "6pA" + # stim_amplitude = "6pA" # stim_amplitude = "5.135697186048022pA" for vb in VB_motors: diff --git a/c302/c302_TargetMuscle.py b/c302/c302_TargetMuscle.py index 927ce365..b04b28fa 100644 --- a/c302/c302_TargetMuscle.py +++ b/c302/c302_TargetMuscle.py @@ -1,5 +1,6 @@ import c302 import sys +import importlib def setup( @@ -13,7 +14,11 @@ def setup( config_param_overrides={}, verbose=True, ): - exec("from c302.parameters_%s import ParameterisedModel" % parameter_set, globals()) + ParameterisedModel = getattr( + importlib.import_module("c302.parameters_%s" % parameter_set), + "ParameterisedModel", + ) + params = ParameterisedModel() params.set_bioparameter( diff --git a/c302/c302_utils.py b/c302/c302_utils.py index bad981a1..81c55721 100644 --- a/c302/c302_utils.py +++ b/c302/c302_utils.py @@ -1,7 +1,6 @@ import sys import os import re -import traceback import matplotlib.pyplot as plt import numpy as np @@ -82,8 +81,8 @@ def plots(a_n, info, cells, dt): # print plt.xlim() -def plots_prof(a_n, info, cells, dt): - cProfile.run("real_plots(a_n, info, cells, dt)") +# def plots_prof(a_n, info, cells, dt): +# cProfile.run("real_plots(a_n, info, cells, dt)") def generate_traces_plot( @@ -414,7 +413,7 @@ def _show_conn_matrix( fig.canvas.manager.set_window_title(title) # cm = matplotlib.cm.get_cmap('gist_stern_r') - if colormap == None: + if colormap is None: cmap = plt.colormaps["gist_stern_r"] else: # cmap = plt.colormaps['gist_earth'] @@ -519,7 +518,7 @@ def generate_conn_matrix( with Bundle("openworm/owmeta-data", version=6) as bnd: all_neuron_info, all_muscle_info = c302._get_cell_info(bnd, all_cells) except Exception as e: - traceback.print_exc() + # traceback.print_exc() c302.print_( "Unable to connect to the owmeta bundle: %s\n Proceeding anyway..." % e ) diff --git a/c302/parameters_C2.py b/c302/parameters_C2.py index 17780d0e..114b78d8 100644 --- a/c302/parameters_C2.py +++ b/c302/parameters_C2.py @@ -549,10 +549,10 @@ def set_default_bioparameters(self): # self.add_bioparameter("AVBL_to_DB7_elec_syn_gbase", "0.000002 nS", "BlindGuess", "0.1") # self.add_bioparameter("AVBR_to_DB7_elec_syn_gbase", "0.000002 nS", "BlindGuess", "0.1") - motors = ["DB1", "DB2", "DB3", "DB4", "DB5", "DB6", "DB7"] + # motors = ["DB1", "DB2", "DB3", "DB4", "DB5", "DB6", "DB7"] - neuron_to_neuron_sigma_unit = "per_mV" - neuron_to_neuron_mu_unit = "mV" + # neuron_to_neuron_sigma_unit = "per_mV" + # neuron_to_neuron_mu_unit = "mV" """values = [0.02662421961090314, 0.03534736844496468, 0.24117986141424783, 0.728445888242295, -31.097782892768087, -70.4530293802399, 0.0027901748325678665, 0.04819419381285881, 0.23145430508321702, 0.43259522880823403, -36.33291776403307, -59.353240638482205, 0.05582343246072261, 0.02190008612606287, 0.01, 0.31362780659357425, -66.21115226650004, -52.771417774165776, 0.022627891796868617, 0.019850673688929135, 0.5369334557283133, 0.6157151722578514, -56.58839267667179, -31.98566849893263, 0.0005311880646276632, 0.0007106752078277979, 0.5403093047212282, 0.851692451899331, -26.21928028856079, -36.07220973721469, 0.02239184298106873, 0.00557754534270731, 0.7336559136122108, 0.5396665394749418, -64.251546993354, -58.86832496681512, 0.05911723837418301, 0.05906803856778177, 0.3889133592395809, 0.9, -63.690021804793005, -65.0201808538768, 0.06252, 0.042808104791508095, 0.3870392542369817, 0.359369090000899, -62.00034119097063, -52.385364801981375, 0.01982498040815311, 0.0006263956386551118, 0.01, 0.07344429039663045, 3.2623740935761845, -24.383527105537627, 0.003234785879364064, 0.0013257779195953625, 0.6187551784924861, 0.02010414785586577, 3.037646907306896, -15.804515459300069, 0.008737088303665016, 0.005164680784308186, 0.6646075833887313, 0.6585834274110807, 3.8543086695981366, -60.13096941077282, 0.012477100014060296, 0.022424408328393895, 0.128433033088237, 0.31642838666989964, -5.188754434920856, 5.659506146829591, 0.002580608318239302, 0.011268010981673115, 0.38691673081318745, 0.4051876112158369, 0.08969391093452314, -38.19673533204123, 0.003652415316987105, 0.01447855276084489, 2e-05, 0.032406033165681754, 0.012313305082229144, 0.010630678619124256, 2e-05, 0.040750179035623724, 0.004113193789608253, 0.001621502777546093, 0.01857066607998348, 0.020426074336082088] v = 0 diff --git a/examples/LEMS_c302_A_Full.xml b/examples/LEMS_c302_A_Full.xml index 031a0a0d..07460fe6 100644 --- a/examples/LEMS_c302_A_Full.xml +++ b/examples/LEMS_c302_A_Full.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: All cells diff --git a/examples/LEMS_c302_A_IClamp.xml b/examples/LEMS_c302_A_IClamp.xml index 5a267a14..9da8ae3c 100644 --- a/examples/LEMS_c302_A_IClamp.xml +++ b/examples/LEMS_c302_A_IClamp.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['ADAL', 'PVCL'] diff --git a/examples/LEMS_c302_A_Muscles.xml b/examples/LEMS_c302_A_Muscles.xml index e38ac72e..2f130113 100644 --- a/examples/LEMS_c302_A_Muscles.xml +++ b/examples/LEMS_c302_A_Muscles.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['AS1', 'AS10', 'AS11', 'AS2', 'AS3', 'AS4', 'AS5', 'AS6', 'AS7', 'AS8', 'AS9', 'AVFL', 'AVFR', 'AVKR', 'AVL', 'CEPVL', 'CEPVR', 'DA1', 'DA2', 'DA3', 'DA4', 'DA5', 'DA6', 'DA7', 'DA8', 'DA9', 'DB1', 'DB2', 'DB3', 'DB4', 'DB5', 'DB6', 'DB7', 'DD1', 'DD2', 'DD3', 'DD4', 'DD5', 'DD6', 'DVB', 'HSNL', 'HSNR', 'IL1DL', 'IL1DR', 'IL1L', 'IL1R', 'IL1VL', 'IL1VR', 'PDA', 'PDB', 'PVNL', 'PVNR', 'RID', 'RIML', 'RIMR', 'RIVL', 'RIVR', 'RMDDL', 'RMDDR', 'RMDL', 'RMDR', 'RMDVL', 'RMDVR', 'RMED', 'RMEL', 'RMER', 'RMEV', 'RMFL', 'RMGL', 'RMGR', 'RMHL', 'RMHR', 'SMBDL', 'SMBDR', 'SMBVL', 'SMBVR', 'SMDDL', 'SMDDR', 'SMDVL', 'SMDVR', 'URADL', 'URADR', 'URAVL', 'URAVR', 'VA1', 'VA10', 'VA11', 'VA12', 'VA2', 'VA3', 'VA4', 'VA5', 'VA6', 'VA7', 'VA8', 'VA9', 'VB1', 'VB10', 'VB11', 'VB2', 'VB3', 'VB4', 'VB5', 'VB6', 'VB7', 'VB8', 'VB9', 'VC1', 'VC2', 'VC3', 'VC4', 'VC5', 'VC6', 'VD1', 'VD10', 'VD11', 'VD12', 'VD13', 'VD2', 'VD3', 'VD4', 'VD5', 'VD6', 'VD7', 'VD8', 'VD9', 'AVAL', 'AVAR', 'AVBL', 'AVBR', 'AVDL', 'AVDR', 'PVCL', 'PVCR'] diff --git a/examples/LEMS_c302_A_Oscillator.xml b/examples/LEMS_c302_A_Oscillator.xml index 629a1e84..e622bf39 100644 --- a/examples/LEMS_c302_A_Oscillator.xml +++ b/examples/LEMS_c302_A_Oscillator.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['DB2', 'VB2', 'DD2', 'VD2', 'DB3', 'VB3', 'DD3', 'VD3', 'DA2', 'VA2', 'DA3', 'VA3', 'AVBL', 'AVBR'] diff --git a/examples/LEMS_c302_A_Pharyngeal.xml b/examples/LEMS_c302_A_Pharyngeal.xml index 41b9d63b..482c73fa 100644 --- a/examples/LEMS_c302_A_Pharyngeal.xml +++ b/examples/LEMS_c302_A_Pharyngeal.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['M1', 'M2L', 'M2R', 'M3L', 'M3R', 'M4', 'M5', 'I1L', 'I1R', 'I2L', 'I2R', 'I3', 'I4', 'I5', 'I6', 'MI', 'NSML', 'NSMR', 'MCL', 'MCR'] diff --git a/examples/LEMS_c302_A_Social.xml b/examples/LEMS_c302_A_Social.xml index e2080ebf..e6563bd0 100644 --- a/examples/LEMS_c302_A_Social.xml +++ b/examples/LEMS_c302_A_Social.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['RMGR', 'ASHR', 'ASKR', 'AWBR', 'IL2R', 'RMHR', 'URXR'] diff --git a/examples/LEMS_c302_A_Syns.xml b/examples/LEMS_c302_A_Syns.xml index 5d64cbf6..f366e3a4 100644 --- a/examples/LEMS_c302_A_Syns.xml +++ b/examples/LEMS_c302_A_Syns.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['URYDL', 'SMDDR', 'VD12', 'VB11', 'AS2'] diff --git a/examples/LEMS_c302_B_Full.xml b/examples/LEMS_c302_B_Full.xml index d96a06b9..9cceec09 100644 --- a/examples/LEMS_c302_B_Full.xml +++ b/examples/LEMS_c302_B_Full.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: All cells diff --git a/examples/LEMS_c302_B_IClamp.xml b/examples/LEMS_c302_B_IClamp.xml index 9b24884a..fe74361e 100644 --- a/examples/LEMS_c302_B_IClamp.xml +++ b/examples/LEMS_c302_B_IClamp.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['ADAL', 'PVCL'] diff --git a/examples/LEMS_c302_B_Muscles.xml b/examples/LEMS_c302_B_Muscles.xml index 60b6d42b..63c89a7d 100644 --- a/examples/LEMS_c302_B_Muscles.xml +++ b/examples/LEMS_c302_B_Muscles.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['AS1', 'AS10', 'AS11', 'AS2', 'AS3', 'AS4', 'AS5', 'AS6', 'AS7', 'AS8', 'AS9', 'AVFL', 'AVFR', 'AVKR', 'AVL', 'CEPVL', 'CEPVR', 'DA1', 'DA2', 'DA3', 'DA4', 'DA5', 'DA6', 'DA7', 'DA8', 'DA9', 'DB1', 'DB2', 'DB3', 'DB4', 'DB5', 'DB6', 'DB7', 'DD1', 'DD2', 'DD3', 'DD4', 'DD5', 'DD6', 'DVB', 'HSNL', 'HSNR', 'IL1DL', 'IL1DR', 'IL1L', 'IL1R', 'IL1VL', 'IL1VR', 'PDA', 'PDB', 'PVNL', 'PVNR', 'RID', 'RIML', 'RIMR', 'RIVL', 'RIVR', 'RMDDL', 'RMDDR', 'RMDL', 'RMDR', 'RMDVL', 'RMDVR', 'RMED', 'RMEL', 'RMER', 'RMEV', 'RMFL', 'RMGL', 'RMGR', 'RMHL', 'RMHR', 'SMBDL', 'SMBDR', 'SMBVL', 'SMBVR', 'SMDDL', 'SMDDR', 'SMDVL', 'SMDVR', 'URADL', 'URADR', 'URAVL', 'URAVR', 'VA1', 'VA10', 'VA11', 'VA12', 'VA2', 'VA3', 'VA4', 'VA5', 'VA6', 'VA7', 'VA8', 'VA9', 'VB1', 'VB10', 'VB11', 'VB2', 'VB3', 'VB4', 'VB5', 'VB6', 'VB7', 'VB8', 'VB9', 'VC1', 'VC2', 'VC3', 'VC4', 'VC5', 'VC6', 'VD1', 'VD10', 'VD11', 'VD12', 'VD13', 'VD2', 'VD3', 'VD4', 'VD5', 'VD6', 'VD7', 'VD8', 'VD9', 'AVAL', 'AVAR', 'AVBL', 'AVBR', 'AVDL', 'AVDR', 'PVCL', 'PVCR'] diff --git a/examples/LEMS_c302_B_Oscillator.xml b/examples/LEMS_c302_B_Oscillator.xml index 2edcdf10..da31c6a1 100644 --- a/examples/LEMS_c302_B_Oscillator.xml +++ b/examples/LEMS_c302_B_Oscillator.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['DB2', 'VB2', 'DD2', 'VD2', 'DB3', 'VB3', 'DD3', 'VD3', 'DA2', 'VA2', 'DA3', 'VA3', 'AVBL', 'AVBR'] diff --git a/examples/LEMS_c302_B_Pharyngeal.xml b/examples/LEMS_c302_B_Pharyngeal.xml index 3cd196a7..b83a70d2 100644 --- a/examples/LEMS_c302_B_Pharyngeal.xml +++ b/examples/LEMS_c302_B_Pharyngeal.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['M1', 'M2L', 'M2R', 'M3L', 'M3R', 'M4', 'M5', 'I1L', 'I1R', 'I2L', 'I2R', 'I3', 'I4', 'I5', 'I6', 'MI', 'NSML', 'NSMR', 'MCL', 'MCR'] diff --git a/examples/LEMS_c302_B_Social.xml b/examples/LEMS_c302_B_Social.xml index fe0f1108..d11d0649 100644 --- a/examples/LEMS_c302_B_Social.xml +++ b/examples/LEMS_c302_B_Social.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['RMGR', 'ASHR', 'ASKR', 'AWBR', 'IL2R', 'RMHR', 'URXR'] diff --git a/examples/LEMS_c302_B_Syns.xml b/examples/LEMS_c302_B_Syns.xml index 22719fd3..008cf177 100644 --- a/examples/LEMS_c302_B_Syns.xml +++ b/examples/LEMS_c302_B_Syns.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['URYDL', 'SMDDR', 'VD12', 'VB11', 'AS2', 'AIZL', 'ASHL'] diff --git a/examples/LEMS_c302_C0_Full.xml b/examples/LEMS_c302_C0_Full.xml index 7c4d6445..ec1074d2 100644 --- a/examples/LEMS_c302_C0_Full.xml +++ b/examples/LEMS_c302_C0_Full.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: All cells diff --git a/examples/LEMS_c302_C0_IClamp.xml b/examples/LEMS_c302_C0_IClamp.xml index bbb8dbc3..94fe5f1d 100644 --- a/examples/LEMS_c302_C0_IClamp.xml +++ b/examples/LEMS_c302_C0_IClamp.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['ADAL', 'PVCL'] diff --git a/examples/LEMS_c302_C0_Muscles.xml b/examples/LEMS_c302_C0_Muscles.xml index 1ad3c2b6..8b55ddc7 100644 --- a/examples/LEMS_c302_C0_Muscles.xml +++ b/examples/LEMS_c302_C0_Muscles.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['AS1', 'AS10', 'AS11', 'AS2', 'AS3', 'AS4', 'AS5', 'AS6', 'AS7', 'AS8', 'AS9', 'AVFL', 'AVFR', 'AVKR', 'AVL', 'CEPVL', 'CEPVR', 'DA1', 'DA2', 'DA3', 'DA4', 'DA5', 'DA6', 'DA7', 'DA8', 'DA9', 'DB1', 'DB2', 'DB3', 'DB4', 'DB5', 'DB6', 'DB7', 'DD1', 'DD2', 'DD3', 'DD4', 'DD5', 'DD6', 'DVB', 'HSNL', 'HSNR', 'IL1DL', 'IL1DR', 'IL1L', 'IL1R', 'IL1VL', 'IL1VR', 'PDA', 'PDB', 'PVNL', 'PVNR', 'RID', 'RIML', 'RIMR', 'RIVL', 'RIVR', 'RMDDL', 'RMDDR', 'RMDL', 'RMDR', 'RMDVL', 'RMDVR', 'RMED', 'RMEL', 'RMER', 'RMEV', 'RMFL', 'RMGL', 'RMGR', 'RMHL', 'RMHR', 'SMBDL', 'SMBDR', 'SMBVL', 'SMBVR', 'SMDDL', 'SMDDR', 'SMDVL', 'SMDVR', 'URADL', 'URADR', 'URAVL', 'URAVR', 'VA1', 'VA10', 'VA11', 'VA12', 'VA2', 'VA3', 'VA4', 'VA5', 'VA6', 'VA7', 'VA8', 'VA9', 'VB1', 'VB10', 'VB11', 'VB2', 'VB3', 'VB4', 'VB5', 'VB6', 'VB7', 'VB8', 'VB9', 'VC1', 'VC2', 'VC3', 'VC4', 'VC5', 'VC6', 'VD1', 'VD10', 'VD11', 'VD12', 'VD13', 'VD2', 'VD3', 'VD4', 'VD5', 'VD6', 'VD7', 'VD8', 'VD9', 'AVAL', 'AVAR', 'AVBL', 'AVBR', 'AVDL', 'AVDR', 'PVCL', 'PVCR'] diff --git a/examples/LEMS_c302_C0_Oscillator.xml b/examples/LEMS_c302_C0_Oscillator.xml index edaa76f6..0ceb0280 100644 --- a/examples/LEMS_c302_C0_Oscillator.xml +++ b/examples/LEMS_c302_C0_Oscillator.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['DB2', 'VB2', 'DD2', 'VD2', 'DB3', 'VB3', 'DD3', 'VD3', 'DA2', 'VA2', 'DA3', 'VA3', 'AVBL', 'AVBR'] diff --git a/examples/LEMS_c302_C0_Pharyngeal.xml b/examples/LEMS_c302_C0_Pharyngeal.xml index 55ce57af..0ad3d3c9 100644 --- a/examples/LEMS_c302_C0_Pharyngeal.xml +++ b/examples/LEMS_c302_C0_Pharyngeal.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['M1', 'M2L', 'M2R', 'M3L', 'M3R', 'M4', 'M5', 'I1L', 'I1R', 'I2L', 'I2R', 'I3', 'I4', 'I5', 'I6', 'MI', 'NSML', 'NSMR', 'MCL', 'MCR'] diff --git a/examples/LEMS_c302_C0_Social.xml b/examples/LEMS_c302_C0_Social.xml index f60ed969..9c096f89 100644 --- a/examples/LEMS_c302_C0_Social.xml +++ b/examples/LEMS_c302_C0_Social.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['RMGR', 'ASHR', 'ASKR', 'AWBR', 'IL2R', 'RMHR', 'URXR'] diff --git a/examples/LEMS_c302_C0_Syns.xml b/examples/LEMS_c302_C0_Syns.xml index a44b58a7..0808b66f 100644 --- a/examples/LEMS_c302_C0_Syns.xml +++ b/examples/LEMS_c302_C0_Syns.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['URYDL', 'SMDDR', 'VD12', 'VB11', 'AS2', 'AIZL', 'ASHL'] diff --git a/examples/LEMS_c302_C1_Full.xml b/examples/LEMS_c302_C1_Full.xml index 8e27e424..31dce9df 100644 --- a/examples/LEMS_c302_C1_Full.xml +++ b/examples/LEMS_c302_C1_Full.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: All cells diff --git a/examples/LEMS_c302_C1_IClamp.xml b/examples/LEMS_c302_C1_IClamp.xml index fb89b632..f0343454 100644 --- a/examples/LEMS_c302_C1_IClamp.xml +++ b/examples/LEMS_c302_C1_IClamp.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['ADAL', 'PVCL'] diff --git a/examples/LEMS_c302_C1_Muscles.xml b/examples/LEMS_c302_C1_Muscles.xml index 7bcca2f0..06a08de8 100644 --- a/examples/LEMS_c302_C1_Muscles.xml +++ b/examples/LEMS_c302_C1_Muscles.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['AS1', 'AS10', 'AS11', 'AS2', 'AS3', 'AS4', 'AS5', 'AS6', 'AS7', 'AS8', 'AS9', 'AVFL', 'AVFR', 'AVKR', 'AVL', 'CEPVL', 'CEPVR', 'DA1', 'DA2', 'DA3', 'DA4', 'DA5', 'DA6', 'DA7', 'DA8', 'DA9', 'DB1', 'DB2', 'DB3', 'DB4', 'DB5', 'DB6', 'DB7', 'DD1', 'DD2', 'DD3', 'DD4', 'DD5', 'DD6', 'DVB', 'HSNL', 'HSNR', 'IL1DL', 'IL1DR', 'IL1L', 'IL1R', 'IL1VL', 'IL1VR', 'PDA', 'PDB', 'PVNL', 'PVNR', 'RID', 'RIML', 'RIMR', 'RIVL', 'RIVR', 'RMDDL', 'RMDDR', 'RMDL', 'RMDR', 'RMDVL', 'RMDVR', 'RMED', 'RMEL', 'RMER', 'RMEV', 'RMFL', 'RMGL', 'RMGR', 'RMHL', 'RMHR', 'SMBDL', 'SMBDR', 'SMBVL', 'SMBVR', 'SMDDL', 'SMDDR', 'SMDVL', 'SMDVR', 'URADL', 'URADR', 'URAVL', 'URAVR', 'VA1', 'VA10', 'VA11', 'VA12', 'VA2', 'VA3', 'VA4', 'VA5', 'VA6', 'VA7', 'VA8', 'VA9', 'VB1', 'VB10', 'VB11', 'VB2', 'VB3', 'VB4', 'VB5', 'VB6', 'VB7', 'VB8', 'VB9', 'VC1', 'VC2', 'VC3', 'VC4', 'VC5', 'VC6', 'VD1', 'VD10', 'VD11', 'VD12', 'VD13', 'VD2', 'VD3', 'VD4', 'VD5', 'VD6', 'VD7', 'VD8', 'VD9', 'AVAL', 'AVAR', 'AVBL', 'AVBR', 'AVDL', 'AVDR', 'PVCL', 'PVCR'] diff --git a/examples/LEMS_c302_C1_Oscillator.xml b/examples/LEMS_c302_C1_Oscillator.xml index 8fe4fb86..9c1aa087 100644 --- a/examples/LEMS_c302_C1_Oscillator.xml +++ b/examples/LEMS_c302_C1_Oscillator.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['DB2', 'VB2', 'DD2', 'VD2', 'DB3', 'VB3', 'DD3', 'VD3', 'DA2', 'VA2', 'DA3', 'VA3', 'AVBL', 'AVBR'] diff --git a/examples/LEMS_c302_C1_Pharyngeal.xml b/examples/LEMS_c302_C1_Pharyngeal.xml index 22f3bbd8..e6bd212c 100644 --- a/examples/LEMS_c302_C1_Pharyngeal.xml +++ b/examples/LEMS_c302_C1_Pharyngeal.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['M1', 'M2L', 'M2R', 'M3L', 'M3R', 'M4', 'M5', 'I1L', 'I1R', 'I2L', 'I2R', 'I3', 'I4', 'I5', 'I6', 'MI', 'NSML', 'NSMR', 'MCL', 'MCR'] diff --git a/examples/LEMS_c302_C1_Social.xml b/examples/LEMS_c302_C1_Social.xml index df7e5356..b1079535 100644 --- a/examples/LEMS_c302_C1_Social.xml +++ b/examples/LEMS_c302_C1_Social.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['RMGR', 'ASHR', 'ASKR', 'AWBR', 'IL2R', 'RMHR', 'URXR'] diff --git a/examples/LEMS_c302_C1_Syns.xml b/examples/LEMS_c302_C1_Syns.xml index 8cf78f21..f519738d 100644 --- a/examples/LEMS_c302_C1_Syns.xml +++ b/examples/LEMS_c302_C1_Syns.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['URYDL', 'SMDDR', 'VD12', 'VB11', 'AS2', 'AIZL', 'ASHL'] diff --git a/examples/LEMS_c302_C2_FW.xml b/examples/LEMS_c302_C2_FW.xml index 6697236f..8c1efb9d 100644 --- a/examples/LEMS_c302_C2_FW.xml +++ b/examples/LEMS_c302_C2_FW.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: UpdatedSpreadsheetDataReader2 - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['AVBL', 'AVBR', 'DB1', 'DB2', 'DB3', 'DB4', 'DB5', 'DB6', 'DB7', 'VD1', 'VD2', 'VD3', 'VD4', 'VD5', 'VD6', 'VD7', 'VD8', 'VD9', 'VD10', 'VD11', 'VD12', 'VD13', 'VB1', 'VB2', 'VB3', 'VB4', 'VB5', 'VB6', 'VB7', 'VB8', 'VB9', 'VB10', 'VB11', 'DD1', 'DD2', 'DD3', 'DD4', 'DD5', 'DD6'] diff --git a/examples/LEMS_c302_C2_Full.xml b/examples/LEMS_c302_C2_Full.xml index 578b95ee..6a7ebb66 100644 --- a/examples/LEMS_c302_C2_Full.xml +++ b/examples/LEMS_c302_C2_Full.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: All cells diff --git a/examples/LEMS_c302_C2_IClamp.xml b/examples/LEMS_c302_C2_IClamp.xml index 667139d0..78739892 100644 --- a/examples/LEMS_c302_C2_IClamp.xml +++ b/examples/LEMS_c302_C2_IClamp.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['ADAL', 'PVCL'] diff --git a/examples/LEMS_c302_C2_Muscles.xml b/examples/LEMS_c302_C2_Muscles.xml index 5c3a3f54..38171b07 100644 --- a/examples/LEMS_c302_C2_Muscles.xml +++ b/examples/LEMS_c302_C2_Muscles.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['AS1', 'AS10', 'AS11', 'AS2', 'AS3', 'AS4', 'AS5', 'AS6', 'AS7', 'AS8', 'AS9', 'AVFL', 'AVFR', 'AVKR', 'AVL', 'CEPVL', 'CEPVR', 'DA1', 'DA2', 'DA3', 'DA4', 'DA5', 'DA6', 'DA7', 'DA8', 'DA9', 'DB1', 'DB2', 'DB3', 'DB4', 'DB5', 'DB6', 'DB7', 'DD1', 'DD2', 'DD3', 'DD4', 'DD5', 'DD6', 'DVB', 'HSNL', 'HSNR', 'IL1DL', 'IL1DR', 'IL1L', 'IL1R', 'IL1VL', 'IL1VR', 'PDA', 'PDB', 'PVNL', 'PVNR', 'RID', 'RIML', 'RIMR', 'RIVL', 'RIVR', 'RMDDL', 'RMDDR', 'RMDL', 'RMDR', 'RMDVL', 'RMDVR', 'RMED', 'RMEL', 'RMER', 'RMEV', 'RMFL', 'RMGL', 'RMGR', 'RMHL', 'RMHR', 'SMBDL', 'SMBDR', 'SMBVL', 'SMBVR', 'SMDDL', 'SMDDR', 'SMDVL', 'SMDVR', 'URADL', 'URADR', 'URAVL', 'URAVR', 'VA1', 'VA10', 'VA11', 'VA12', 'VA2', 'VA3', 'VA4', 'VA5', 'VA6', 'VA7', 'VA8', 'VA9', 'VB1', 'VB10', 'VB11', 'VB2', 'VB3', 'VB4', 'VB5', 'VB6', 'VB7', 'VB8', 'VB9', 'VC1', 'VC2', 'VC3', 'VC4', 'VC5', 'VC6', 'VD1', 'VD10', 'VD11', 'VD12', 'VD13', 'VD2', 'VD3', 'VD4', 'VD5', 'VD6', 'VD7', 'VD8', 'VD9', 'AVAL', 'AVAR', 'AVBL', 'AVBR', 'AVDL', 'AVDR', 'PVCL', 'PVCR'] diff --git a/examples/LEMS_c302_C2_Oscillator.xml b/examples/LEMS_c302_C2_Oscillator.xml index 97377f28..ceaa89f1 100644 --- a/examples/LEMS_c302_C2_Oscillator.xml +++ b/examples/LEMS_c302_C2_Oscillator.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['DB2', 'VB2', 'DD2', 'VD2', 'DB3', 'VB3', 'DD3', 'VD3', 'DA2', 'VA2', 'DA3', 'VA3', 'AVBL', 'AVBR'] diff --git a/examples/LEMS_c302_C2_Pharyngeal.xml b/examples/LEMS_c302_C2_Pharyngeal.xml index 22139732..371fc219 100644 --- a/examples/LEMS_c302_C2_Pharyngeal.xml +++ b/examples/LEMS_c302_C2_Pharyngeal.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['M1', 'M2L', 'M2R', 'M3L', 'M3R', 'M4', 'M5', 'I1L', 'I1R', 'I2L', 'I2R', 'I3', 'I4', 'I5', 'I6', 'MI', 'NSML', 'NSMR', 'MCL', 'MCR'] diff --git a/examples/LEMS_c302_C2_Social.xml b/examples/LEMS_c302_C2_Social.xml index ea6f1b6d..9d5965de 100644 --- a/examples/LEMS_c302_C2_Social.xml +++ b/examples/LEMS_c302_C2_Social.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['RMGR', 'ASHR', 'ASKR', 'AWBR', 'IL2R', 'RMHR', 'URXR'] diff --git a/examples/LEMS_c302_C2_Syns.xml b/examples/LEMS_c302_C2_Syns.xml index ca31dc1c..58222da4 100644 --- a/examples/LEMS_c302_C2_Syns.xml +++ b/examples/LEMS_c302_C2_Syns.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['URYDL', 'SMDDR', 'VD12', 'VB11', 'AS2', 'AIZL', 'ASHL'] diff --git a/examples/LEMS_c302_C_Full.xml b/examples/LEMS_c302_C_Full.xml index f66fa9dd..e47691d4 100644 --- a/examples/LEMS_c302_C_Full.xml +++ b/examples/LEMS_c302_C_Full.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: All cells diff --git a/examples/LEMS_c302_C_IClamp.xml b/examples/LEMS_c302_C_IClamp.xml index eb81e11f..14891293 100644 --- a/examples/LEMS_c302_C_IClamp.xml +++ b/examples/LEMS_c302_C_IClamp.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['ADAL', 'PVCL'] diff --git a/examples/LEMS_c302_C_Muscles.xml b/examples/LEMS_c302_C_Muscles.xml index a5b84316..dd480fdf 100644 --- a/examples/LEMS_c302_C_Muscles.xml +++ b/examples/LEMS_c302_C_Muscles.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['AS1', 'AS10', 'AS11', 'AS2', 'AS3', 'AS4', 'AS5', 'AS6', 'AS7', 'AS8', 'AS9', 'AVFL', 'AVFR', 'AVKR', 'AVL', 'CEPVL', 'CEPVR', 'DA1', 'DA2', 'DA3', 'DA4', 'DA5', 'DA6', 'DA7', 'DA8', 'DA9', 'DB1', 'DB2', 'DB3', 'DB4', 'DB5', 'DB6', 'DB7', 'DD1', 'DD2', 'DD3', 'DD4', 'DD5', 'DD6', 'DVB', 'HSNL', 'HSNR', 'IL1DL', 'IL1DR', 'IL1L', 'IL1R', 'IL1VL', 'IL1VR', 'PDA', 'PDB', 'PVNL', 'PVNR', 'RID', 'RIML', 'RIMR', 'RIVL', 'RIVR', 'RMDDL', 'RMDDR', 'RMDL', 'RMDR', 'RMDVL', 'RMDVR', 'RMED', 'RMEL', 'RMER', 'RMEV', 'RMFL', 'RMGL', 'RMGR', 'RMHL', 'RMHR', 'SMBDL', 'SMBDR', 'SMBVL', 'SMBVR', 'SMDDL', 'SMDDR', 'SMDVL', 'SMDVR', 'URADL', 'URADR', 'URAVL', 'URAVR', 'VA1', 'VA10', 'VA11', 'VA12', 'VA2', 'VA3', 'VA4', 'VA5', 'VA6', 'VA7', 'VA8', 'VA9', 'VB1', 'VB10', 'VB11', 'VB2', 'VB3', 'VB4', 'VB5', 'VB6', 'VB7', 'VB8', 'VB9', 'VC1', 'VC2', 'VC3', 'VC4', 'VC5', 'VC6', 'VD1', 'VD10', 'VD11', 'VD12', 'VD13', 'VD2', 'VD3', 'VD4', 'VD5', 'VD6', 'VD7', 'VD8', 'VD9', 'AVAL', 'AVAR', 'AVBL', 'AVBR', 'AVDL', 'AVDR', 'PVCL', 'PVCR'] diff --git a/examples/LEMS_c302_C_Oscillator.xml b/examples/LEMS_c302_C_Oscillator.xml index 6f9d0bfc..7d097322 100644 --- a/examples/LEMS_c302_C_Oscillator.xml +++ b/examples/LEMS_c302_C_Oscillator.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['DB2', 'VB2', 'DD2', 'VD2', 'DB3', 'VB3', 'DD3', 'VD3', 'DA2', 'VA2', 'DA3', 'VA3', 'AVBL', 'AVBR'] diff --git a/examples/LEMS_c302_C_Pharyngeal.xml b/examples/LEMS_c302_C_Pharyngeal.xml index 1ddaed25..3c79d0f9 100644 --- a/examples/LEMS_c302_C_Pharyngeal.xml +++ b/examples/LEMS_c302_C_Pharyngeal.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['M1', 'M2L', 'M2R', 'M3L', 'M3R', 'M4', 'M5', 'I1L', 'I1R', 'I2L', 'I2R', 'I3', 'I4', 'I5', 'I6', 'MI', 'NSML', 'NSMR', 'MCL', 'MCR'] diff --git a/examples/LEMS_c302_C_Social.xml b/examples/LEMS_c302_C_Social.xml index 59be25de..8896f360 100644 --- a/examples/LEMS_c302_C_Social.xml +++ b/examples/LEMS_c302_C_Social.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['RMGR', 'ASHR', 'ASKR', 'AWBR', 'IL2R', 'RMHR', 'URXR'] diff --git a/examples/LEMS_c302_C_Syns.xml b/examples/LEMS_c302_C_Syns.xml index 3ab946ab..9130fd93 100644 --- a/examples/LEMS_c302_C_Syns.xml +++ b/examples/LEMS_c302_C_Syns.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['URYDL', 'SMDDR', 'VD12', 'VB11', 'AS2', 'AIZL', 'ASHL'] diff --git a/examples/LEMS_c302_D1_Full.xml b/examples/LEMS_c302_D1_Full.xml index 40930a94..3ad7adc7 100644 --- a/examples/LEMS_c302_D1_Full.xml +++ b/examples/LEMS_c302_D1_Full.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: All cells diff --git a/examples/LEMS_c302_D1_IClamp.xml b/examples/LEMS_c302_D1_IClamp.xml index 959e0022..db5c269a 100644 --- a/examples/LEMS_c302_D1_IClamp.xml +++ b/examples/LEMS_c302_D1_IClamp.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['ADAL', 'PVCL'] diff --git a/examples/LEMS_c302_D1_Muscles.xml b/examples/LEMS_c302_D1_Muscles.xml index 4e0da7ee..21ad12f7 100644 --- a/examples/LEMS_c302_D1_Muscles.xml +++ b/examples/LEMS_c302_D1_Muscles.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['AS1', 'AS10', 'AS11', 'AS2', 'AS3', 'AS4', 'AS5', 'AS6', 'AS7', 'AS8', 'AS9', 'AVFL', 'AVFR', 'AVKR', 'AVL', 'CEPVL', 'CEPVR', 'DA1', 'DA2', 'DA3', 'DA4', 'DA5', 'DA6', 'DA7', 'DA8', 'DA9', 'DB1', 'DB2', 'DB3', 'DB4', 'DB5', 'DB6', 'DB7', 'DD1', 'DD2', 'DD3', 'DD4', 'DD5', 'DD6', 'DVB', 'HSNL', 'HSNR', 'IL1DL', 'IL1DR', 'IL1L', 'IL1R', 'IL1VL', 'IL1VR', 'PDA', 'PDB', 'PVNL', 'PVNR', 'RID', 'RIML', 'RIMR', 'RIVL', 'RIVR', 'RMDDL', 'RMDDR', 'RMDL', 'RMDR', 'RMDVL', 'RMDVR', 'RMED', 'RMEL', 'RMER', 'RMEV', 'RMFL', 'RMGL', 'RMGR', 'RMHL', 'RMHR', 'SMBDL', 'SMBDR', 'SMBVL', 'SMBVR', 'SMDDL', 'SMDDR', 'SMDVL', 'SMDVR', 'URADL', 'URADR', 'URAVL', 'URAVR', 'VA1', 'VA10', 'VA11', 'VA12', 'VA2', 'VA3', 'VA4', 'VA5', 'VA6', 'VA7', 'VA8', 'VA9', 'VB1', 'VB10', 'VB11', 'VB2', 'VB3', 'VB4', 'VB5', 'VB6', 'VB7', 'VB8', 'VB9', 'VC1', 'VC2', 'VC3', 'VC4', 'VC5', 'VC6', 'VD1', 'VD10', 'VD11', 'VD12', 'VD13', 'VD2', 'VD3', 'VD4', 'VD5', 'VD6', 'VD7', 'VD8', 'VD9', 'AVAL', 'AVAR', 'AVBL', 'AVBR', 'AVDL', 'AVDR', 'PVCL', 'PVCR'] diff --git a/examples/LEMS_c302_D1_Oscillator.xml b/examples/LEMS_c302_D1_Oscillator.xml index d71900f5..dbef6c6e 100644 --- a/examples/LEMS_c302_D1_Oscillator.xml +++ b/examples/LEMS_c302_D1_Oscillator.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['DB2', 'VB2', 'DD2', 'VD2', 'DB3', 'VB3', 'DD3', 'VD3', 'DA2', 'VA2', 'DA3', 'VA3', 'AVBL', 'AVBR'] diff --git a/examples/LEMS_c302_D1_Pharyngeal.xml b/examples/LEMS_c302_D1_Pharyngeal.xml index c294751f..37012cff 100644 --- a/examples/LEMS_c302_D1_Pharyngeal.xml +++ b/examples/LEMS_c302_D1_Pharyngeal.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['M1', 'M2L', 'M2R', 'M3L', 'M3R', 'M4', 'M5', 'I1L', 'I1R', 'I2L', 'I2R', 'I3', 'I4', 'I5', 'I6', 'MI', 'NSML', 'NSMR', 'MCL', 'MCR'] diff --git a/examples/LEMS_c302_D1_Social.xml b/examples/LEMS_c302_D1_Social.xml index 83a181ef..9b45f0be 100644 --- a/examples/LEMS_c302_D1_Social.xml +++ b/examples/LEMS_c302_D1_Social.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['RMGR', 'ASHR', 'ASKR', 'AWBR', 'IL2R', 'RMHR', 'URXR'] diff --git a/examples/LEMS_c302_D1_Syns.xml b/examples/LEMS_c302_D1_Syns.xml index 9ade2386..f336eeeb 100644 --- a/examples/LEMS_c302_D1_Syns.xml +++ b/examples/LEMS_c302_D1_Syns.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['URYDL', 'SMDDR', 'VD12', 'VB11', 'AS2', 'AIZL', 'ASHL'] diff --git a/examples/LEMS_c302_D_Full.xml b/examples/LEMS_c302_D_Full.xml index b969ba85..143574b8 100644 --- a/examples/LEMS_c302_D_Full.xml +++ b/examples/LEMS_c302_D_Full.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: All cells diff --git a/examples/LEMS_c302_D_IClamp.xml b/examples/LEMS_c302_D_IClamp.xml index 835e6543..2e054e18 100644 --- a/examples/LEMS_c302_D_IClamp.xml +++ b/examples/LEMS_c302_D_IClamp.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['ADAL', 'PVCL'] diff --git a/examples/LEMS_c302_D_Muscles.xml b/examples/LEMS_c302_D_Muscles.xml index 28ec43a0..06291faa 100644 --- a/examples/LEMS_c302_D_Muscles.xml +++ b/examples/LEMS_c302_D_Muscles.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['AS1', 'AS10', 'AS11', 'AS2', 'AS3', 'AS4', 'AS5', 'AS6', 'AS7', 'AS8', 'AS9', 'AVFL', 'AVFR', 'AVKR', 'AVL', 'CEPVL', 'CEPVR', 'DA1', 'DA2', 'DA3', 'DA4', 'DA5', 'DA6', 'DA7', 'DA8', 'DA9', 'DB1', 'DB2', 'DB3', 'DB4', 'DB5', 'DB6', 'DB7', 'DD1', 'DD2', 'DD3', 'DD4', 'DD5', 'DD6', 'DVB', 'HSNL', 'HSNR', 'IL1DL', 'IL1DR', 'IL1L', 'IL1R', 'IL1VL', 'IL1VR', 'PDA', 'PDB', 'PVNL', 'PVNR', 'RID', 'RIML', 'RIMR', 'RIVL', 'RIVR', 'RMDDL', 'RMDDR', 'RMDL', 'RMDR', 'RMDVL', 'RMDVR', 'RMED', 'RMEL', 'RMER', 'RMEV', 'RMFL', 'RMGL', 'RMGR', 'RMHL', 'RMHR', 'SMBDL', 'SMBDR', 'SMBVL', 'SMBVR', 'SMDDL', 'SMDDR', 'SMDVL', 'SMDVR', 'URADL', 'URADR', 'URAVL', 'URAVR', 'VA1', 'VA10', 'VA11', 'VA12', 'VA2', 'VA3', 'VA4', 'VA5', 'VA6', 'VA7', 'VA8', 'VA9', 'VB1', 'VB10', 'VB11', 'VB2', 'VB3', 'VB4', 'VB5', 'VB6', 'VB7', 'VB8', 'VB9', 'VC1', 'VC2', 'VC3', 'VC4', 'VC5', 'VC6', 'VD1', 'VD10', 'VD11', 'VD12', 'VD13', 'VD2', 'VD3', 'VD4', 'VD5', 'VD6', 'VD7', 'VD8', 'VD9', 'AVAL', 'AVAR', 'AVBL', 'AVBR', 'AVDL', 'AVDR', 'PVCL', 'PVCR'] diff --git a/examples/LEMS_c302_D_Oscillator.xml b/examples/LEMS_c302_D_Oscillator.xml index accdafe0..dd5f9eca 100644 --- a/examples/LEMS_c302_D_Oscillator.xml +++ b/examples/LEMS_c302_D_Oscillator.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['DB2', 'VB2', 'DD2', 'VD2', 'DB3', 'VB3', 'DD3', 'VD3', 'DA2', 'VA2', 'DA3', 'VA3', 'AVBL', 'AVBR'] diff --git a/examples/LEMS_c302_D_Pharyngeal.xml b/examples/LEMS_c302_D_Pharyngeal.xml index ecab182b..a1db5a18 100644 --- a/examples/LEMS_c302_D_Pharyngeal.xml +++ b/examples/LEMS_c302_D_Pharyngeal.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['M1', 'M2L', 'M2R', 'M3L', 'M3R', 'M4', 'M5', 'I1L', 'I1R', 'I2L', 'I2R', 'I3', 'I4', 'I5', 'I6', 'MI', 'NSML', 'NSMR', 'MCL', 'MCR'] diff --git a/examples/LEMS_c302_D_Social.xml b/examples/LEMS_c302_D_Social.xml index 1cfd1795..73fcf930 100644 --- a/examples/LEMS_c302_D_Social.xml +++ b/examples/LEMS_c302_D_Social.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['RMGR', 'ASHR', 'ASKR', 'AWBR', 'IL2R', 'RMHR', 'URXR'] diff --git a/examples/LEMS_c302_D_Syns.xml b/examples/LEMS_c302_D_Syns.xml index 47605e3e..228495d6 100644 --- a/examples/LEMS_c302_D_Syns.xml +++ b/examples/LEMS_c302_D_Syns.xml @@ -6,7 +6,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['URYDL', 'SMDDR', 'VD12', 'VB11', 'AS2', 'AIZL', 'ASHL'] diff --git a/examples/c302_A_Full.net.nml b/examples/c302_A_Full.net.nml index 1694923d..d5906072 100644 --- a/examples/c302_A_Full.net.nml +++ b/examples/c302_A_Full.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: All cells diff --git a/examples/c302_A_IClamp.net.nml b/examples/c302_A_IClamp.net.nml index 0dc91abe..bd17932d 100644 --- a/examples/c302_A_IClamp.net.nml +++ b/examples/c302_A_IClamp.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['ADAL', 'PVCL'] diff --git a/examples/c302_A_Muscles.net.nml b/examples/c302_A_Muscles.net.nml index c37541dd..13e72231 100644 --- a/examples/c302_A_Muscles.net.nml +++ b/examples/c302_A_Muscles.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['AS1', 'AS10', 'AS11', 'AS2', 'AS3', 'AS4', 'AS5', 'AS6', 'AS7', 'AS8', 'AS9', 'AVFL', 'AVFR', 'AVKR', 'AVL', 'CEPVL', 'CEPVR', 'DA1', 'DA2', 'DA3', 'DA4', 'DA5', 'DA6', 'DA7', 'DA8', 'DA9', 'DB1', 'DB2', 'DB3', 'DB4', 'DB5', 'DB6', 'DB7', 'DD1', 'DD2', 'DD3', 'DD4', 'DD5', 'DD6', 'DVB', 'HSNL', 'HSNR', 'IL1DL', 'IL1DR', 'IL1L', 'IL1R', 'IL1VL', 'IL1VR', 'PDA', 'PDB', 'PVNL', 'PVNR', 'RID', 'RIML', 'RIMR', 'RIVL', 'RIVR', 'RMDDL', 'RMDDR', 'RMDL', 'RMDR', 'RMDVL', 'RMDVR', 'RMED', 'RMEL', 'RMER', 'RMEV', 'RMFL', 'RMGL', 'RMGR', 'RMHL', 'RMHR', 'SMBDL', 'SMBDR', 'SMBVL', 'SMBVR', 'SMDDL', 'SMDDR', 'SMDVL', 'SMDVR', 'URADL', 'URADR', 'URAVL', 'URAVR', 'VA1', 'VA10', 'VA11', 'VA12', 'VA2', 'VA3', 'VA4', 'VA5', 'VA6', 'VA7', 'VA8', 'VA9', 'VB1', 'VB10', 'VB11', 'VB2', 'VB3', 'VB4', 'VB5', 'VB6', 'VB7', 'VB8', 'VB9', 'VC1', 'VC2', 'VC3', 'VC4', 'VC5', 'VC6', 'VD1', 'VD10', 'VD11', 'VD12', 'VD13', 'VD2', 'VD3', 'VD4', 'VD5', 'VD6', 'VD7', 'VD8', 'VD9', 'AVAL', 'AVAR', 'AVBL', 'AVBR', 'AVDL', 'AVDR', 'PVCL', 'PVCR'] diff --git a/examples/c302_A_Oscillator.net.nml b/examples/c302_A_Oscillator.net.nml index de5dae77..3207ba7f 100644 --- a/examples/c302_A_Oscillator.net.nml +++ b/examples/c302_A_Oscillator.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['DB2', 'VB2', 'DD2', 'VD2', 'DB3', 'VB3', 'DD3', 'VD3', 'DA2', 'VA2', 'DA3', 'VA3', 'AVBL', 'AVBR'] diff --git a/examples/c302_A_Pharyngeal.net.nml b/examples/c302_A_Pharyngeal.net.nml index 0cb7f9b6..025dc08d 100644 --- a/examples/c302_A_Pharyngeal.net.nml +++ b/examples/c302_A_Pharyngeal.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['M1', 'M2L', 'M2R', 'M3L', 'M3R', 'M4', 'M5', 'I1L', 'I1R', 'I2L', 'I2R', 'I3', 'I4', 'I5', 'I6', 'MI', 'NSML', 'NSMR', 'MCL', 'MCR'] diff --git a/examples/c302_A_Social.net.nml b/examples/c302_A_Social.net.nml index a2454827..4ccd5091 100644 --- a/examples/c302_A_Social.net.nml +++ b/examples/c302_A_Social.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['RMGR', 'ASHR', 'ASKR', 'AWBR', 'IL2R', 'RMHR', 'URXR'] diff --git a/examples/c302_A_Syns.net.nml b/examples/c302_A_Syns.net.nml index 22411e1c..d55b43ee 100644 --- a/examples/c302_A_Syns.net.nml +++ b/examples/c302_A_Syns.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['URYDL', 'SMDDR', 'VD12', 'VB11', 'AS2'] diff --git a/examples/c302_B_Full.net.nml b/examples/c302_B_Full.net.nml index 7c5cb2e6..56156ddd 100644 --- a/examples/c302_B_Full.net.nml +++ b/examples/c302_B_Full.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: All cells diff --git a/examples/c302_B_IClamp.net.nml b/examples/c302_B_IClamp.net.nml index 8e6b14d5..4c5eb55f 100644 --- a/examples/c302_B_IClamp.net.nml +++ b/examples/c302_B_IClamp.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['ADAL', 'PVCL'] diff --git a/examples/c302_B_Muscles.net.nml b/examples/c302_B_Muscles.net.nml index 4dcde20c..a670b467 100644 --- a/examples/c302_B_Muscles.net.nml +++ b/examples/c302_B_Muscles.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['AS1', 'AS10', 'AS11', 'AS2', 'AS3', 'AS4', 'AS5', 'AS6', 'AS7', 'AS8', 'AS9', 'AVFL', 'AVFR', 'AVKR', 'AVL', 'CEPVL', 'CEPVR', 'DA1', 'DA2', 'DA3', 'DA4', 'DA5', 'DA6', 'DA7', 'DA8', 'DA9', 'DB1', 'DB2', 'DB3', 'DB4', 'DB5', 'DB6', 'DB7', 'DD1', 'DD2', 'DD3', 'DD4', 'DD5', 'DD6', 'DVB', 'HSNL', 'HSNR', 'IL1DL', 'IL1DR', 'IL1L', 'IL1R', 'IL1VL', 'IL1VR', 'PDA', 'PDB', 'PVNL', 'PVNR', 'RID', 'RIML', 'RIMR', 'RIVL', 'RIVR', 'RMDDL', 'RMDDR', 'RMDL', 'RMDR', 'RMDVL', 'RMDVR', 'RMED', 'RMEL', 'RMER', 'RMEV', 'RMFL', 'RMGL', 'RMGR', 'RMHL', 'RMHR', 'SMBDL', 'SMBDR', 'SMBVL', 'SMBVR', 'SMDDL', 'SMDDR', 'SMDVL', 'SMDVR', 'URADL', 'URADR', 'URAVL', 'URAVR', 'VA1', 'VA10', 'VA11', 'VA12', 'VA2', 'VA3', 'VA4', 'VA5', 'VA6', 'VA7', 'VA8', 'VA9', 'VB1', 'VB10', 'VB11', 'VB2', 'VB3', 'VB4', 'VB5', 'VB6', 'VB7', 'VB8', 'VB9', 'VC1', 'VC2', 'VC3', 'VC4', 'VC5', 'VC6', 'VD1', 'VD10', 'VD11', 'VD12', 'VD13', 'VD2', 'VD3', 'VD4', 'VD5', 'VD6', 'VD7', 'VD8', 'VD9', 'AVAL', 'AVAR', 'AVBL', 'AVBR', 'AVDL', 'AVDR', 'PVCL', 'PVCR'] diff --git a/examples/c302_B_Oscillator.net.nml b/examples/c302_B_Oscillator.net.nml index a5fadabc..be32ff6d 100644 --- a/examples/c302_B_Oscillator.net.nml +++ b/examples/c302_B_Oscillator.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['DB2', 'VB2', 'DD2', 'VD2', 'DB3', 'VB3', 'DD3', 'VD3', 'DA2', 'VA2', 'DA3', 'VA3', 'AVBL', 'AVBR'] diff --git a/examples/c302_B_Pharyngeal.net.nml b/examples/c302_B_Pharyngeal.net.nml index 8ce33726..f3f31eff 100644 --- a/examples/c302_B_Pharyngeal.net.nml +++ b/examples/c302_B_Pharyngeal.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['M1', 'M2L', 'M2R', 'M3L', 'M3R', 'M4', 'M5', 'I1L', 'I1R', 'I2L', 'I2R', 'I3', 'I4', 'I5', 'I6', 'MI', 'NSML', 'NSMR', 'MCL', 'MCR'] diff --git a/examples/c302_B_Social.net.nml b/examples/c302_B_Social.net.nml index aa4b8838..39328608 100644 --- a/examples/c302_B_Social.net.nml +++ b/examples/c302_B_Social.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['RMGR', 'ASHR', 'ASKR', 'AWBR', 'IL2R', 'RMHR', 'URXR'] diff --git a/examples/c302_B_Syns.net.nml b/examples/c302_B_Syns.net.nml index a3e5c037..87855bc2 100644 --- a/examples/c302_B_Syns.net.nml +++ b/examples/c302_B_Syns.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['URYDL', 'SMDDR', 'VD12', 'VB11', 'AS2', 'AIZL', 'ASHL'] diff --git a/examples/c302_C0_Full.net.nml b/examples/c302_C0_Full.net.nml index 14864f64..d572296c 100644 --- a/examples/c302_C0_Full.net.nml +++ b/examples/c302_C0_Full.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: All cells diff --git a/examples/c302_C0_IClamp.net.nml b/examples/c302_C0_IClamp.net.nml index 9e6b81d2..e265ffdb 100644 --- a/examples/c302_C0_IClamp.net.nml +++ b/examples/c302_C0_IClamp.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['ADAL', 'PVCL'] diff --git a/examples/c302_C0_Muscles.net.nml b/examples/c302_C0_Muscles.net.nml index 7a8793d1..39514a08 100644 --- a/examples/c302_C0_Muscles.net.nml +++ b/examples/c302_C0_Muscles.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['AS1', 'AS10', 'AS11', 'AS2', 'AS3', 'AS4', 'AS5', 'AS6', 'AS7', 'AS8', 'AS9', 'AVFL', 'AVFR', 'AVKR', 'AVL', 'CEPVL', 'CEPVR', 'DA1', 'DA2', 'DA3', 'DA4', 'DA5', 'DA6', 'DA7', 'DA8', 'DA9', 'DB1', 'DB2', 'DB3', 'DB4', 'DB5', 'DB6', 'DB7', 'DD1', 'DD2', 'DD3', 'DD4', 'DD5', 'DD6', 'DVB', 'HSNL', 'HSNR', 'IL1DL', 'IL1DR', 'IL1L', 'IL1R', 'IL1VL', 'IL1VR', 'PDA', 'PDB', 'PVNL', 'PVNR', 'RID', 'RIML', 'RIMR', 'RIVL', 'RIVR', 'RMDDL', 'RMDDR', 'RMDL', 'RMDR', 'RMDVL', 'RMDVR', 'RMED', 'RMEL', 'RMER', 'RMEV', 'RMFL', 'RMGL', 'RMGR', 'RMHL', 'RMHR', 'SMBDL', 'SMBDR', 'SMBVL', 'SMBVR', 'SMDDL', 'SMDDR', 'SMDVL', 'SMDVR', 'URADL', 'URADR', 'URAVL', 'URAVR', 'VA1', 'VA10', 'VA11', 'VA12', 'VA2', 'VA3', 'VA4', 'VA5', 'VA6', 'VA7', 'VA8', 'VA9', 'VB1', 'VB10', 'VB11', 'VB2', 'VB3', 'VB4', 'VB5', 'VB6', 'VB7', 'VB8', 'VB9', 'VC1', 'VC2', 'VC3', 'VC4', 'VC5', 'VC6', 'VD1', 'VD10', 'VD11', 'VD12', 'VD13', 'VD2', 'VD3', 'VD4', 'VD5', 'VD6', 'VD7', 'VD8', 'VD9', 'AVAL', 'AVAR', 'AVBL', 'AVBR', 'AVDL', 'AVDR', 'PVCL', 'PVCR'] diff --git a/examples/c302_C0_Oscillator.net.nml b/examples/c302_C0_Oscillator.net.nml index 6a15d27e..c2a47e90 100644 --- a/examples/c302_C0_Oscillator.net.nml +++ b/examples/c302_C0_Oscillator.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['DB2', 'VB2', 'DD2', 'VD2', 'DB3', 'VB3', 'DD3', 'VD3', 'DA2', 'VA2', 'DA3', 'VA3', 'AVBL', 'AVBR'] diff --git a/examples/c302_C0_Pharyngeal.net.nml b/examples/c302_C0_Pharyngeal.net.nml index 34935bf1..c7820059 100644 --- a/examples/c302_C0_Pharyngeal.net.nml +++ b/examples/c302_C0_Pharyngeal.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['M1', 'M2L', 'M2R', 'M3L', 'M3R', 'M4', 'M5', 'I1L', 'I1R', 'I2L', 'I2R', 'I3', 'I4', 'I5', 'I6', 'MI', 'NSML', 'NSMR', 'MCL', 'MCR'] diff --git a/examples/c302_C0_Social.net.nml b/examples/c302_C0_Social.net.nml index a1af5904..5b9ff69c 100644 --- a/examples/c302_C0_Social.net.nml +++ b/examples/c302_C0_Social.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['RMGR', 'ASHR', 'ASKR', 'AWBR', 'IL2R', 'RMHR', 'URXR'] diff --git a/examples/c302_C0_Syns.net.nml b/examples/c302_C0_Syns.net.nml index b75903f5..2be2b11a 100644 --- a/examples/c302_C0_Syns.net.nml +++ b/examples/c302_C0_Syns.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['URYDL', 'SMDDR', 'VD12', 'VB11', 'AS2', 'AIZL', 'ASHL'] diff --git a/examples/c302_C1_Full.net.nml b/examples/c302_C1_Full.net.nml index fba68221..c042a1bd 100644 --- a/examples/c302_C1_Full.net.nml +++ b/examples/c302_C1_Full.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: All cells diff --git a/examples/c302_C1_IClamp.net.nml b/examples/c302_C1_IClamp.net.nml index d82b20c8..96082f67 100644 --- a/examples/c302_C1_IClamp.net.nml +++ b/examples/c302_C1_IClamp.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['ADAL', 'PVCL'] diff --git a/examples/c302_C1_Muscles.net.nml b/examples/c302_C1_Muscles.net.nml index 5d41a1b5..4c5faec4 100644 --- a/examples/c302_C1_Muscles.net.nml +++ b/examples/c302_C1_Muscles.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['AS1', 'AS10', 'AS11', 'AS2', 'AS3', 'AS4', 'AS5', 'AS6', 'AS7', 'AS8', 'AS9', 'AVFL', 'AVFR', 'AVKR', 'AVL', 'CEPVL', 'CEPVR', 'DA1', 'DA2', 'DA3', 'DA4', 'DA5', 'DA6', 'DA7', 'DA8', 'DA9', 'DB1', 'DB2', 'DB3', 'DB4', 'DB5', 'DB6', 'DB7', 'DD1', 'DD2', 'DD3', 'DD4', 'DD5', 'DD6', 'DVB', 'HSNL', 'HSNR', 'IL1DL', 'IL1DR', 'IL1L', 'IL1R', 'IL1VL', 'IL1VR', 'PDA', 'PDB', 'PVNL', 'PVNR', 'RID', 'RIML', 'RIMR', 'RIVL', 'RIVR', 'RMDDL', 'RMDDR', 'RMDL', 'RMDR', 'RMDVL', 'RMDVR', 'RMED', 'RMEL', 'RMER', 'RMEV', 'RMFL', 'RMGL', 'RMGR', 'RMHL', 'RMHR', 'SMBDL', 'SMBDR', 'SMBVL', 'SMBVR', 'SMDDL', 'SMDDR', 'SMDVL', 'SMDVR', 'URADL', 'URADR', 'URAVL', 'URAVR', 'VA1', 'VA10', 'VA11', 'VA12', 'VA2', 'VA3', 'VA4', 'VA5', 'VA6', 'VA7', 'VA8', 'VA9', 'VB1', 'VB10', 'VB11', 'VB2', 'VB3', 'VB4', 'VB5', 'VB6', 'VB7', 'VB8', 'VB9', 'VC1', 'VC2', 'VC3', 'VC4', 'VC5', 'VC6', 'VD1', 'VD10', 'VD11', 'VD12', 'VD13', 'VD2', 'VD3', 'VD4', 'VD5', 'VD6', 'VD7', 'VD8', 'VD9', 'AVAL', 'AVAR', 'AVBL', 'AVBR', 'AVDL', 'AVDR', 'PVCL', 'PVCR'] diff --git a/examples/c302_C1_Oscillator.net.nml b/examples/c302_C1_Oscillator.net.nml index 05351cbc..69225c56 100644 --- a/examples/c302_C1_Oscillator.net.nml +++ b/examples/c302_C1_Oscillator.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['DB2', 'VB2', 'DD2', 'VD2', 'DB3', 'VB3', 'DD3', 'VD3', 'DA2', 'VA2', 'DA3', 'VA3', 'AVBL', 'AVBR'] diff --git a/examples/c302_C1_Pharyngeal.net.nml b/examples/c302_C1_Pharyngeal.net.nml index cf8930ac..649db9dd 100644 --- a/examples/c302_C1_Pharyngeal.net.nml +++ b/examples/c302_C1_Pharyngeal.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['M1', 'M2L', 'M2R', 'M3L', 'M3R', 'M4', 'M5', 'I1L', 'I1R', 'I2L', 'I2R', 'I3', 'I4', 'I5', 'I6', 'MI', 'NSML', 'NSMR', 'MCL', 'MCR'] diff --git a/examples/c302_C1_Social.net.nml b/examples/c302_C1_Social.net.nml index e649aee0..d59bc4a9 100644 --- a/examples/c302_C1_Social.net.nml +++ b/examples/c302_C1_Social.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['RMGR', 'ASHR', 'ASKR', 'AWBR', 'IL2R', 'RMHR', 'URXR'] diff --git a/examples/c302_C1_Syns.net.nml b/examples/c302_C1_Syns.net.nml index bf719f70..7c96c4bb 100644 --- a/examples/c302_C1_Syns.net.nml +++ b/examples/c302_C1_Syns.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['URYDL', 'SMDDR', 'VD12', 'VB11', 'AS2', 'AIZL', 'ASHL'] diff --git a/examples/c302_C2_FW.net.nml b/examples/c302_C2_FW.net.nml index 7ab9252e..70e6739e 100644 --- a/examples/c302_C2_FW.net.nml +++ b/examples/c302_C2_FW.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: UpdatedSpreadsheetDataReader2 - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['AVBL', 'AVBR', 'DB1', 'DB2', 'DB3', 'DB4', 'DB5', 'DB6', 'DB7', 'VD1', 'VD2', 'VD3', 'VD4', 'VD5', 'VD6', 'VD7', 'VD8', 'VD9', 'VD10', 'VD11', 'VD12', 'VD13', 'VB1', 'VB2', 'VB3', 'VB4', 'VB5', 'VB6', 'VB7', 'VB8', 'VB9', 'VB10', 'VB11', 'DD1', 'DD2', 'DD3', 'DD4', 'DD5', 'DD6'] diff --git a/examples/c302_C2_Full.net.nml b/examples/c302_C2_Full.net.nml index 926428de..fec8509e 100644 --- a/examples/c302_C2_Full.net.nml +++ b/examples/c302_C2_Full.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: All cells diff --git a/examples/c302_C2_IClamp.net.nml b/examples/c302_C2_IClamp.net.nml index a797a391..866a291f 100644 --- a/examples/c302_C2_IClamp.net.nml +++ b/examples/c302_C2_IClamp.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['ADAL', 'PVCL'] diff --git a/examples/c302_C2_Muscles.net.nml b/examples/c302_C2_Muscles.net.nml index ef076ee8..b7868360 100644 --- a/examples/c302_C2_Muscles.net.nml +++ b/examples/c302_C2_Muscles.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['AS1', 'AS10', 'AS11', 'AS2', 'AS3', 'AS4', 'AS5', 'AS6', 'AS7', 'AS8', 'AS9', 'AVFL', 'AVFR', 'AVKR', 'AVL', 'CEPVL', 'CEPVR', 'DA1', 'DA2', 'DA3', 'DA4', 'DA5', 'DA6', 'DA7', 'DA8', 'DA9', 'DB1', 'DB2', 'DB3', 'DB4', 'DB5', 'DB6', 'DB7', 'DD1', 'DD2', 'DD3', 'DD4', 'DD5', 'DD6', 'DVB', 'HSNL', 'HSNR', 'IL1DL', 'IL1DR', 'IL1L', 'IL1R', 'IL1VL', 'IL1VR', 'PDA', 'PDB', 'PVNL', 'PVNR', 'RID', 'RIML', 'RIMR', 'RIVL', 'RIVR', 'RMDDL', 'RMDDR', 'RMDL', 'RMDR', 'RMDVL', 'RMDVR', 'RMED', 'RMEL', 'RMER', 'RMEV', 'RMFL', 'RMGL', 'RMGR', 'RMHL', 'RMHR', 'SMBDL', 'SMBDR', 'SMBVL', 'SMBVR', 'SMDDL', 'SMDDR', 'SMDVL', 'SMDVR', 'URADL', 'URADR', 'URAVL', 'URAVR', 'VA1', 'VA10', 'VA11', 'VA12', 'VA2', 'VA3', 'VA4', 'VA5', 'VA6', 'VA7', 'VA8', 'VA9', 'VB1', 'VB10', 'VB11', 'VB2', 'VB3', 'VB4', 'VB5', 'VB6', 'VB7', 'VB8', 'VB9', 'VC1', 'VC2', 'VC3', 'VC4', 'VC5', 'VC6', 'VD1', 'VD10', 'VD11', 'VD12', 'VD13', 'VD2', 'VD3', 'VD4', 'VD5', 'VD6', 'VD7', 'VD8', 'VD9', 'AVAL', 'AVAR', 'AVBL', 'AVBR', 'AVDL', 'AVDR', 'PVCL', 'PVCR'] diff --git a/examples/c302_C2_Oscillator.net.nml b/examples/c302_C2_Oscillator.net.nml index 0ced9ca0..8e184c87 100644 --- a/examples/c302_C2_Oscillator.net.nml +++ b/examples/c302_C2_Oscillator.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['DB2', 'VB2', 'DD2', 'VD2', 'DB3', 'VB3', 'DD3', 'VD3', 'DA2', 'VA2', 'DA3', 'VA3', 'AVBL', 'AVBR'] diff --git a/examples/c302_C2_Pharyngeal.net.nml b/examples/c302_C2_Pharyngeal.net.nml index 24322919..6b70b13c 100644 --- a/examples/c302_C2_Pharyngeal.net.nml +++ b/examples/c302_C2_Pharyngeal.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['M1', 'M2L', 'M2R', 'M3L', 'M3R', 'M4', 'M5', 'I1L', 'I1R', 'I2L', 'I2R', 'I3', 'I4', 'I5', 'I6', 'MI', 'NSML', 'NSMR', 'MCL', 'MCR'] diff --git a/examples/c302_C2_Social.net.nml b/examples/c302_C2_Social.net.nml index a2e866a2..b33af2bb 100644 --- a/examples/c302_C2_Social.net.nml +++ b/examples/c302_C2_Social.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['RMGR', 'ASHR', 'ASKR', 'AWBR', 'IL2R', 'RMHR', 'URXR'] diff --git a/examples/c302_C2_Syns.net.nml b/examples/c302_C2_Syns.net.nml index a6980d4d..3c8b2372 100644 --- a/examples/c302_C2_Syns.net.nml +++ b/examples/c302_C2_Syns.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['URYDL', 'SMDDR', 'VD12', 'VB11', 'AS2', 'AIZL', 'ASHL'] diff --git a/examples/c302_C_Full.net.nml b/examples/c302_C_Full.net.nml index b9fb71e7..ce3a079e 100644 --- a/examples/c302_C_Full.net.nml +++ b/examples/c302_C_Full.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: All cells diff --git a/examples/c302_C_IClamp.net.nml b/examples/c302_C_IClamp.net.nml index 4bd0af13..4ae070f0 100644 --- a/examples/c302_C_IClamp.net.nml +++ b/examples/c302_C_IClamp.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['ADAL', 'PVCL'] diff --git a/examples/c302_C_Muscles.net.nml b/examples/c302_C_Muscles.net.nml index 7aa9f27d..550d6b9b 100644 --- a/examples/c302_C_Muscles.net.nml +++ b/examples/c302_C_Muscles.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['AS1', 'AS10', 'AS11', 'AS2', 'AS3', 'AS4', 'AS5', 'AS6', 'AS7', 'AS8', 'AS9', 'AVFL', 'AVFR', 'AVKR', 'AVL', 'CEPVL', 'CEPVR', 'DA1', 'DA2', 'DA3', 'DA4', 'DA5', 'DA6', 'DA7', 'DA8', 'DA9', 'DB1', 'DB2', 'DB3', 'DB4', 'DB5', 'DB6', 'DB7', 'DD1', 'DD2', 'DD3', 'DD4', 'DD5', 'DD6', 'DVB', 'HSNL', 'HSNR', 'IL1DL', 'IL1DR', 'IL1L', 'IL1R', 'IL1VL', 'IL1VR', 'PDA', 'PDB', 'PVNL', 'PVNR', 'RID', 'RIML', 'RIMR', 'RIVL', 'RIVR', 'RMDDL', 'RMDDR', 'RMDL', 'RMDR', 'RMDVL', 'RMDVR', 'RMED', 'RMEL', 'RMER', 'RMEV', 'RMFL', 'RMGL', 'RMGR', 'RMHL', 'RMHR', 'SMBDL', 'SMBDR', 'SMBVL', 'SMBVR', 'SMDDL', 'SMDDR', 'SMDVL', 'SMDVR', 'URADL', 'URADR', 'URAVL', 'URAVR', 'VA1', 'VA10', 'VA11', 'VA12', 'VA2', 'VA3', 'VA4', 'VA5', 'VA6', 'VA7', 'VA8', 'VA9', 'VB1', 'VB10', 'VB11', 'VB2', 'VB3', 'VB4', 'VB5', 'VB6', 'VB7', 'VB8', 'VB9', 'VC1', 'VC2', 'VC3', 'VC4', 'VC5', 'VC6', 'VD1', 'VD10', 'VD11', 'VD12', 'VD13', 'VD2', 'VD3', 'VD4', 'VD5', 'VD6', 'VD7', 'VD8', 'VD9', 'AVAL', 'AVAR', 'AVBL', 'AVBR', 'AVDL', 'AVDR', 'PVCL', 'PVCR'] diff --git a/examples/c302_C_Oscillator.net.nml b/examples/c302_C_Oscillator.net.nml index a2ee9103..f75bffc6 100644 --- a/examples/c302_C_Oscillator.net.nml +++ b/examples/c302_C_Oscillator.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['DB2', 'VB2', 'DD2', 'VD2', 'DB3', 'VB3', 'DD3', 'VD3', 'DA2', 'VA2', 'DA3', 'VA3', 'AVBL', 'AVBR'] diff --git a/examples/c302_C_Pharyngeal.net.nml b/examples/c302_C_Pharyngeal.net.nml index 027e0033..70ea7dc0 100644 --- a/examples/c302_C_Pharyngeal.net.nml +++ b/examples/c302_C_Pharyngeal.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['M1', 'M2L', 'M2R', 'M3L', 'M3R', 'M4', 'M5', 'I1L', 'I1R', 'I2L', 'I2R', 'I3', 'I4', 'I5', 'I6', 'MI', 'NSML', 'NSMR', 'MCL', 'MCR'] diff --git a/examples/c302_C_Social.net.nml b/examples/c302_C_Social.net.nml index 5923535e..f7419ac9 100644 --- a/examples/c302_C_Social.net.nml +++ b/examples/c302_C_Social.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['RMGR', 'ASHR', 'ASKR', 'AWBR', 'IL2R', 'RMHR', 'URXR'] diff --git a/examples/c302_C_Syns.net.nml b/examples/c302_C_Syns.net.nml index 94dc2dbc..8d0ed82b 100644 --- a/examples/c302_C_Syns.net.nml +++ b/examples/c302_C_Syns.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['URYDL', 'SMDDR', 'VD12', 'VB11', 'AS2', 'AIZL', 'ASHL'] diff --git a/examples/c302_D1_Full.net.nml b/examples/c302_D1_Full.net.nml index ffe47de9..bb9e0e5f 100644 --- a/examples/c302_D1_Full.net.nml +++ b/examples/c302_D1_Full.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: All cells diff --git a/examples/c302_D1_IClamp.net.nml b/examples/c302_D1_IClamp.net.nml index 35ec6b77..c52a745e 100644 --- a/examples/c302_D1_IClamp.net.nml +++ b/examples/c302_D1_IClamp.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['ADAL', 'PVCL'] diff --git a/examples/c302_D1_Muscles.net.nml b/examples/c302_D1_Muscles.net.nml index b2708e02..82f2c805 100644 --- a/examples/c302_D1_Muscles.net.nml +++ b/examples/c302_D1_Muscles.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['AS1', 'AS10', 'AS11', 'AS2', 'AS3', 'AS4', 'AS5', 'AS6', 'AS7', 'AS8', 'AS9', 'AVFL', 'AVFR', 'AVKR', 'AVL', 'CEPVL', 'CEPVR', 'DA1', 'DA2', 'DA3', 'DA4', 'DA5', 'DA6', 'DA7', 'DA8', 'DA9', 'DB1', 'DB2', 'DB3', 'DB4', 'DB5', 'DB6', 'DB7', 'DD1', 'DD2', 'DD3', 'DD4', 'DD5', 'DD6', 'DVB', 'HSNL', 'HSNR', 'IL1DL', 'IL1DR', 'IL1L', 'IL1R', 'IL1VL', 'IL1VR', 'PDA', 'PDB', 'PVNL', 'PVNR', 'RID', 'RIML', 'RIMR', 'RIVL', 'RIVR', 'RMDDL', 'RMDDR', 'RMDL', 'RMDR', 'RMDVL', 'RMDVR', 'RMED', 'RMEL', 'RMER', 'RMEV', 'RMFL', 'RMGL', 'RMGR', 'RMHL', 'RMHR', 'SMBDL', 'SMBDR', 'SMBVL', 'SMBVR', 'SMDDL', 'SMDDR', 'SMDVL', 'SMDVR', 'URADL', 'URADR', 'URAVL', 'URAVR', 'VA1', 'VA10', 'VA11', 'VA12', 'VA2', 'VA3', 'VA4', 'VA5', 'VA6', 'VA7', 'VA8', 'VA9', 'VB1', 'VB10', 'VB11', 'VB2', 'VB3', 'VB4', 'VB5', 'VB6', 'VB7', 'VB8', 'VB9', 'VC1', 'VC2', 'VC3', 'VC4', 'VC5', 'VC6', 'VD1', 'VD10', 'VD11', 'VD12', 'VD13', 'VD2', 'VD3', 'VD4', 'VD5', 'VD6', 'VD7', 'VD8', 'VD9', 'AVAL', 'AVAR', 'AVBL', 'AVBR', 'AVDL', 'AVDR', 'PVCL', 'PVCR'] diff --git a/examples/c302_D1_Oscillator.net.nml b/examples/c302_D1_Oscillator.net.nml index a40e9c76..9e8009a1 100644 --- a/examples/c302_D1_Oscillator.net.nml +++ b/examples/c302_D1_Oscillator.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['DB2', 'VB2', 'DD2', 'VD2', 'DB3', 'VB3', 'DD3', 'VD3', 'DA2', 'VA2', 'DA3', 'VA3', 'AVBL', 'AVBR'] diff --git a/examples/c302_D1_Pharyngeal.net.nml b/examples/c302_D1_Pharyngeal.net.nml index 8f9dd82b..84050de4 100644 --- a/examples/c302_D1_Pharyngeal.net.nml +++ b/examples/c302_D1_Pharyngeal.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['M1', 'M2L', 'M2R', 'M3L', 'M3R', 'M4', 'M5', 'I1L', 'I1R', 'I2L', 'I2R', 'I3', 'I4', 'I5', 'I6', 'MI', 'NSML', 'NSMR', 'MCL', 'MCR'] diff --git a/examples/c302_D1_Social.net.nml b/examples/c302_D1_Social.net.nml index edfc7314..88614266 100644 --- a/examples/c302_D1_Social.net.nml +++ b/examples/c302_D1_Social.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['RMGR', 'ASHR', 'ASKR', 'AWBR', 'IL2R', 'RMHR', 'URXR'] diff --git a/examples/c302_D1_Syns.net.nml b/examples/c302_D1_Syns.net.nml index 5707721a..54ec43c7 100644 --- a/examples/c302_D1_Syns.net.nml +++ b/examples/c302_D1_Syns.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['URYDL', 'SMDDR', 'VD12', 'VB11', 'AS2', 'AIZL', 'ASHL'] diff --git a/examples/c302_D_Full.net.nml b/examples/c302_D_Full.net.nml index a9cd98f3..4e4cea23 100644 --- a/examples/c302_D_Full.net.nml +++ b/examples/c302_D_Full.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: All cells diff --git a/examples/c302_D_IClamp.net.nml b/examples/c302_D_IClamp.net.nml index b1e57da0..282f8301 100644 --- a/examples/c302_D_IClamp.net.nml +++ b/examples/c302_D_IClamp.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['ADAL', 'PVCL'] diff --git a/examples/c302_D_Muscles.net.nml b/examples/c302_D_Muscles.net.nml index cd681f6e..ec00153c 100644 --- a/examples/c302_D_Muscles.net.nml +++ b/examples/c302_D_Muscles.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['AS1', 'AS10', 'AS11', 'AS2', 'AS3', 'AS4', 'AS5', 'AS6', 'AS7', 'AS8', 'AS9', 'AVFL', 'AVFR', 'AVKR', 'AVL', 'CEPVL', 'CEPVR', 'DA1', 'DA2', 'DA3', 'DA4', 'DA5', 'DA6', 'DA7', 'DA8', 'DA9', 'DB1', 'DB2', 'DB3', 'DB4', 'DB5', 'DB6', 'DB7', 'DD1', 'DD2', 'DD3', 'DD4', 'DD5', 'DD6', 'DVB', 'HSNL', 'HSNR', 'IL1DL', 'IL1DR', 'IL1L', 'IL1R', 'IL1VL', 'IL1VR', 'PDA', 'PDB', 'PVNL', 'PVNR', 'RID', 'RIML', 'RIMR', 'RIVL', 'RIVR', 'RMDDL', 'RMDDR', 'RMDL', 'RMDR', 'RMDVL', 'RMDVR', 'RMED', 'RMEL', 'RMER', 'RMEV', 'RMFL', 'RMGL', 'RMGR', 'RMHL', 'RMHR', 'SMBDL', 'SMBDR', 'SMBVL', 'SMBVR', 'SMDDL', 'SMDDR', 'SMDVL', 'SMDVR', 'URADL', 'URADR', 'URAVL', 'URAVR', 'VA1', 'VA10', 'VA11', 'VA12', 'VA2', 'VA3', 'VA4', 'VA5', 'VA6', 'VA7', 'VA8', 'VA9', 'VB1', 'VB10', 'VB11', 'VB2', 'VB3', 'VB4', 'VB5', 'VB6', 'VB7', 'VB8', 'VB9', 'VC1', 'VC2', 'VC3', 'VC4', 'VC5', 'VC6', 'VD1', 'VD10', 'VD11', 'VD12', 'VD13', 'VD2', 'VD3', 'VD4', 'VD5', 'VD6', 'VD7', 'VD8', 'VD9', 'AVAL', 'AVAR', 'AVBL', 'AVBR', 'AVDL', 'AVDR', 'PVCL', 'PVCR'] diff --git a/examples/c302_D_Oscillator.net.nml b/examples/c302_D_Oscillator.net.nml index ba3a4bd9..362125a8 100644 --- a/examples/c302_D_Oscillator.net.nml +++ b/examples/c302_D_Oscillator.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['DB2', 'VB2', 'DD2', 'VD2', 'DB3', 'VB3', 'DD3', 'VD3', 'DA2', 'VA2', 'DA3', 'VA3', 'AVBL', 'AVBR'] diff --git a/examples/c302_D_Pharyngeal.net.nml b/examples/c302_D_Pharyngeal.net.nml index ccfbf659..bcc7edcb 100644 --- a/examples/c302_D_Pharyngeal.net.nml +++ b/examples/c302_D_Pharyngeal.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['M1', 'M2L', 'M2R', 'M3L', 'M3R', 'M4', 'M5', 'I1L', 'I1R', 'I2L', 'I2R', 'I3', 'I4', 'I5', 'I6', 'MI', 'NSML', 'NSMR', 'MCL', 'MCR'] diff --git a/examples/c302_D_Social.net.nml b/examples/c302_D_Social.net.nml index 90c9ca5d..8e63f4f7 100644 --- a/examples/c302_D_Social.net.nml +++ b/examples/c302_D_Social.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['RMGR', 'ASHR', 'ASKR', 'AWBR', 'IL2R', 'RMHR', 'URXR'] diff --git a/examples/c302_D_Syns.net.nml b/examples/c302_D_Syns.net.nml index 8b7ee9f4..4ef1863e 100644 --- a/examples/c302_D_Syns.net.nml +++ b/examples/c302_D_Syns.net.nml @@ -4,7 +4,7 @@ Parameters and setting used to generate this network: Data reader: SpreadsheetDataReader - c302 version: 0.9.0 + c302 version: 0.9.1 owmeta version: - not installed - owmeta_core version: - not installed - Cells: ['URYDL', 'SMDDR', 'VD12', 'VB11', 'AS2', 'AIZL', 'ASHL'] diff --git a/examples/parametersweep/CanonicalCircuit.py b/examples/parametersweep/CanonicalCircuit.py index 9c8e65f9..0177bb8a 100644 --- a/examples/parametersweep/CanonicalCircuit.py +++ b/examples/parametersweep/CanonicalCircuit.py @@ -80,10 +80,18 @@ def generate(duration=1000, paramset="C"): net = Network(id=reference) net.parameters = {} + + cell_params = {"bias": 0, "gain": 1, "tau": "100ms"} + if paramset == "X": neuron_id = "GenericNeuronCellX" - neuron_nmllite = Cell(id=neuron_id, lems_source_file='cell_X.xml') + neuron_nmllite = Cell(id=neuron_id, lems_source_file="cell_X.xml") + neuron_nmllite.parameters = {} + + for p in cell_params: + neuron_nmllite.parameters[p] = p + net.parameters[p] = cell_params[p] exc_syn = Synapse( id="neuron_to_neuron_exc_syn_x", neuroml2_source_file="test_syns.xml" @@ -126,11 +134,11 @@ def generate(duration=1000, paramset="C"): net.parameters["scaleDinout"] = 0.5 if paramset == "X": - net.parameters["stim_duration"] = "250ms" - net.parameters["stim_amp"] = "1pA" + net.parameters["stim_duration"] = "2000ms" + net.parameters["stim_amp"] = "0.2pA" net.parameters["weight_IN_MN"] = 1 net.parameters["weight_MN_MN_Exc"] = 1 - net.parameters["weight_MN_MN_Inh"] = -1 + net.parameters["weight_MN_MN_Inh"] = -5 net.parameters["scaleDinout"] = 0.5 mode = "circ" @@ -150,20 +158,22 @@ def generate(duration=1000, paramset="C"): add_connection(net, "DD", "DB", inh_syn, "weight_MN_MN_Inh") if mode == "iclamp": - - add_connection(net, "AVB", "VD", exc_syn, "weight_IN_MN") - add_connection(net, "VD", "VB", exc_syn, "weight_MN_MN_Inh") + add_connection(net, "AVB", "VB", exc_syn, "weight_IN_MN") + add_connection(net, "VB", "VD", exc_syn, "weight_MN_MN_Exc") + # add_connection(net, "VB", "DD", exc_syn, "weight_MN_MN_Exc") + + add_connection(net, "VD", "VB", inh_syn, "weight_MN_MN_Inh") if paramset == "X": - input_source = InputSource( - id="iclamp_0", - neuroml2_input="PulseGenerator", - parameters={ - "amplitude": "stim_amp", - "delay": "500ms", - "duration": "stim_duration", - }, - ) + input_source = InputSource( + id="iclamp_0", + neuroml2_input="PulseGenerator", + parameters={ + "amplitude": "stim_amp", + "delay": "500ms", + "duration": "stim_duration", + }, + ) else: input_source = InputSource( @@ -202,13 +212,15 @@ def generate(duration=1000, paramset="C"): }, ) - if paramset=="X": - - sim.record_traces={} - sim.record_variables={"state": {"all": "*"}, "output": {"all": "*"}} # "V": {"all": "*"}, - sim.plots2D={ + if paramset == "X": + sim.record_traces = {} + sim.record_variables = { + "state": {"all": "*"}, + "output": {"all": "*"}, + } # "V": {"all": "*"}, + sim.plots2D = { "DB-VB": { - "x_axis": "DB/0/%s/output" % neuron_id, + "x_axis": "VD/0/%s/output" % neuron_id, "y_axis": "VB/0/%s/output" % neuron_id, } } diff --git a/examples/parametersweep/Canonical_X.json b/examples/parametersweep/Canonical_X.json index 9c1d05f3..5581c6ee 100644 --- a/examples/parametersweep/Canonical_X.json +++ b/examples/parametersweep/Canonical_X.json @@ -2,15 +2,23 @@ "Canonical_X": { "version": "NeuroMLlite v0.6.1", "parameters": { - "stim_duration": "250ms", - "stim_amp": "1pA", + "bias": 0, + "gain": 1, + "tau": "100ms", + "stim_duration": "2000ms", + "stim_amp": "0.2pA", "weight_IN_MN": 1, "weight_MN_MN_Exc": 1, - "weight_MN_MN_Inh": -1, + "weight_MN_MN_Inh": -5, "scaleDinout": 0.5 }, "cells": { "GenericNeuronCellX": { + "parameters": { + "bias": "bias", + "gain": "gain", + "tau": "tau" + }, "lems_source_file": "cell_X.xml" } }, @@ -119,9 +127,9 @@ } }, "projections": { - "proj_AVB_VD": { + "proj_AVB_VB": { "presynaptic": "AVB", - "postsynaptic": "VD", + "postsynaptic": "VB", "synapse": "neuron_to_neuron_exc_syn_x", "type": "continuousProjection", "delay": 0, @@ -130,10 +138,21 @@ "probability": 1 } }, + "proj_VB_VD": { + "presynaptic": "VB", + "postsynaptic": "VD", + "synapse": "neuron_to_neuron_exc_syn_x", + "type": "continuousProjection", + "delay": 0, + "weight": "weight_MN_MN_Exc", + "random_connectivity": { + "probability": 1 + } + }, "proj_VD_VB": { "presynaptic": "VD", "postsynaptic": "VB", - "synapse": "neuron_to_neuron_exc_syn_x", + "synapse": "neuron_to_neuron_inh_syn_x", "type": "continuousProjection", "delay": 0, "weight": "weight_MN_MN_Inh", diff --git a/examples/parametersweep/Canonical_X.net.nml b/examples/parametersweep/Canonical_X.net.nml index 79faa0bd..24583893 100644 --- a/examples/parametersweep/Canonical_X.net.nml +++ b/examples/parametersweep/Canonical_X.net.nml @@ -3,17 +3,21 @@ Generated network: Canonical_X Generation seed: 1234 NeuroMLlite parameters: + bias = 0 + gain = 1 scaleDinout = 0.5 - stim_amp = 1pA - stim_duration = 250ms + stim_amp = 0.2pA + stim_duration = 2000ms + tau = 100ms weight_IN_MN = 1 weight_MN_MN_Exc = 1 - weight_MN_MN_Inh = -1 + weight_MN_MN_Inh = -5 - + + - + @@ -52,11 +56,14 @@ - - + + + + + - + diff --git a/examples/parametersweep/GenerateExamples.py b/examples/parametersweep/GenerateExamples.py index c0116ff3..85886092 100644 --- a/examples/parametersweep/GenerateExamples.py +++ b/examples/parametersweep/GenerateExamples.py @@ -17,9 +17,9 @@ def generate(cell, duration=3000, config="IClamp", parameters=None): reference = "%s_%s" % (config, cell) cell_id = "%s" % cell - - if cell_id=='GenericNeuronCellX': - cell_nmll = Cell(id=cell_id, lems_source_file='cell_X.xml') + + if cell_id == "GenericNeuronCellX": + cell_nmll = Cell(id=cell_id, lems_source_file="cell_X.xml") else: cell_nmll = Cell(id=cell_id, neuroml2_source_file="%s.cell.nml" % (cell)) @@ -30,15 +30,21 @@ def generate(cell, duration=3000, config="IClamp", parameters=None): if not parameters: parameters = {} parameters["stim_amp"] = "350pA" + + parameters["stim_delay"] = "2000ms" + parameters["stim_duration"] = "6000ms" + + if cell_id is not "GenericNeuronCellX": - if cell_id is not 'GenericNeuronCellX': + parameters["stim_delay"] = "500ms" + parameters["stim_duration"] = "2000ms" input_source = InputSource( id="iclamp_0", neuroml2_input="PulseGenerator", parameters={ "amplitude": "stim_amp", - "delay": "500ms", - "duration": "2000ms", + "delay": "stim_delay", + "duration": "stim_duration", }, ) else: @@ -47,8 +53,8 @@ def generate(cell, duration=3000, config="IClamp", parameters=None): neuroml2_input="PulseGenerator", parameters={ "amplitude": "stim_amp", - "delay": "2000ms", - "duration": "6000ms", + "delay": "stim_delay", + "duration": "stim_duration", }, ) @@ -80,25 +86,28 @@ def generate(cell, duration=3000, config="IClamp", parameters=None): input_for_default_population=input_source, ) - if cell_id=='GenericNeuronCellX': - sim.record_traces={} - sim.record_variables={"v": {"all": "*"}, "state": {"all": "*"}, "output": {"all": "*"}} + if cell_id == "GenericNeuronCellX": + sim.record_traces={"all": "*"} + sim.record_variables = { + "state": {"all": "*"}, + "output": {"all": "*"}, + } - #qprint(dir(sim)) + # qprint(dir(sim)) sim.to_json_file() return sim, net if __name__ == "__main__": - if "-all" in sys.argv: for cell in colors: generate(cell, 3000, config="IClamp", parameters={"stim_amp": "4pA"}) elif "-x" in sys.argv: - - sim, net = generate("GenericNeuronCellX", 10000, config="IClamp", parameters={"stim_amp": "1pA"}) + sim, net = generate( + "GenericNeuronCellX", 10000, config="IClamp", parameters={"stim_amp": "1pA"} + ) check_to_generate_or_run(sys.argv, sim) else: diff --git a/examples/parametersweep/IClamp_GenericMuscleCell.json b/examples/parametersweep/IClamp_GenericMuscleCell.json index 2af36940..e49f5fcb 100644 --- a/examples/parametersweep/IClamp_GenericMuscleCell.json +++ b/examples/parametersweep/IClamp_GenericMuscleCell.json @@ -3,7 +3,9 @@ "version": "NeuroMLlite v0.6.1", "notes": "A network model: IClamp_GenericMuscleCell", "parameters": { - "stim_amp": "4pA" + "stim_amp": "4pA", + "stim_delay": "500ms", + "stim_duration": "2000ms" }, "cells": { "GenericMuscleCell": { @@ -14,8 +16,8 @@ "iclamp_0": { "parameters": { "amplitude": "stim_amp", - "delay": "500ms", - "duration": "2000ms" + "delay": "stim_delay", + "duration": "stim_duration" }, "neuroml2_input": "PulseGenerator" } diff --git a/examples/parametersweep/IClamp_GenericMuscleCell.net.nml b/examples/parametersweep/IClamp_GenericMuscleCell.net.nml index 83935fad..902f8ed8 100644 --- a/examples/parametersweep/IClamp_GenericMuscleCell.net.nml +++ b/examples/parametersweep/IClamp_GenericMuscleCell.net.nml @@ -3,7 +3,9 @@ Generated network: IClamp_GenericMuscleCell Generation seed: 1234 NeuroMLlite parameters: - stim_amp = 4pA + stim_amp = 4pA + stim_delay = 500ms + stim_duration = 2000ms diff --git a/examples/parametersweep/IClamp_GenericNeuronCell.json b/examples/parametersweep/IClamp_GenericNeuronCell.json index 879a3eb4..ff7ce419 100644 --- a/examples/parametersweep/IClamp_GenericNeuronCell.json +++ b/examples/parametersweep/IClamp_GenericNeuronCell.json @@ -3,7 +3,9 @@ "version": "NeuroMLlite v0.6.1", "notes": "A network model: IClamp_GenericNeuronCell", "parameters": { - "stim_amp": "4pA" + "stim_amp": "4pA", + "stim_delay": "500ms", + "stim_duration": "2000ms" }, "cells": { "GenericNeuronCell": { @@ -14,8 +16,8 @@ "iclamp_0": { "parameters": { "amplitude": "stim_amp", - "delay": "500ms", - "duration": "2000ms" + "delay": "stim_delay", + "duration": "stim_duration" }, "neuroml2_input": "PulseGenerator" } diff --git a/examples/parametersweep/IClamp_GenericNeuronCell.net.nml b/examples/parametersweep/IClamp_GenericNeuronCell.net.nml index 7c985ecf..d6428edf 100644 --- a/examples/parametersweep/IClamp_GenericNeuronCell.net.nml +++ b/examples/parametersweep/IClamp_GenericNeuronCell.net.nml @@ -3,7 +3,9 @@ Generated network: IClamp_GenericNeuronCell Generation seed: 1234 NeuroMLlite parameters: - stim_amp = 4pA + stim_amp = 4pA + stim_delay = 500ms + stim_duration = 2000ms diff --git a/examples/parametersweep/SimCanonical_X.json b/examples/parametersweep/SimCanonical_X.json index f6c49233..2c33b1e7 100644 --- a/examples/parametersweep/SimCanonical_X.json +++ b/examples/parametersweep/SimCanonical_X.json @@ -15,7 +15,7 @@ }, "plots2D": { "DB-VB": { - "x_axis": "DB/0/GenericNeuronCellX/output", + "x_axis": "VD/0/GenericNeuronCellX/output", "y_axis": "VB/0/GenericNeuronCellX/output" } } diff --git a/examples/parametersweep/Sweep.py b/examples/parametersweep/Sweep.py index 0571168a..eb9c0316 100644 --- a/examples/parametersweep/Sweep.py +++ b/examples/parametersweep/Sweep.py @@ -248,6 +248,56 @@ print("Showing plots") plt.show() + elif "-x" in sys.argv: + + fixed = {"dt": 0.025, "duration": 3000, "stim_delay": "500ms", "stim_duration": "2000ms"} + + quick = False + # quick=True + + vary = {"stim_amp": ["%spA" % (i / 1) for i in range(-3, 6, 1)]} + + type = "GenericMuscleCell" + type = "GenericNeuronCell" + type = "GenericNeuronCellX" + # type='poolosyn' + config = "IClamp" + # config = 'PoissonFiringSynapse' + + nmllr = NeuroMLliteRunner( + "Sim_%s_%s.json" % (config, type), simulator="jNeuroML" + ) + + if quick: + pass + + ps = ParameterSweep( + nmllr, + vary, + fixed, + num_parallel_runs=1, + plot_all=True, + save_plot_all_to="firing_rates_%s.png" % type, + heatmap_all=True, + save_heatmap_to="heatmap_%s.png" % type, + heatmap_lims=heatmap_lims, + show_plot_already=False, + ) + + report = ps.run() + ps.print_report() + + ps.plotLines('stim_amp','average_last_1percent',save_figure_to='average_last_1percent_%s.png'%type) + + # ps.plotLines('dt','mean_spike_frequency',save_figure_to='mean_spike_frequency_%s.png'%type, logx=True) + # ps.plotLines('number_per_cell','mean_spike_frequency',save_figure_to='poisson_mean_spike_frequency_%s.png'%type) + + import matplotlib.pyplot as plt + + if "-nogui" not in sys.argv: + print("Showing plots") + plt.show() + else: fixed = {"dt": 0.025, "duration": 3000} @@ -278,6 +328,7 @@ type = "GenericMuscleCell" type = "GenericNeuronCell" + type = "GenericNeuronCellX" # type='poolosyn' config = "IClamp" # config = 'PoissonFiringSynapse' diff --git a/examples/parametersweep/cell_X.xml b/examples/parametersweep/cell_X.xml index 5d1001cb..678b17f0 100644 --- a/examples/parametersweep/cell_X.xml +++ b/examples/parametersweep/cell_X.xml @@ -13,7 +13,6 @@ - diff --git a/examples/parametersweep/clean.sh b/examples/parametersweep/clean.sh index b60a0830..691e6dde 100755 --- a/examples/parametersweep/clean.sh +++ b/examples/parametersweep/clean.sh @@ -1 +1,2 @@ -mv *dat *mod *nrn.py *hoc *gv* *pyc rep*txt LEMS* /tmp +rm -rf arm64 x86_64 __pycache__ +mv *dat *mod *nrn.py *hoc *gv* *pyc rep*txt LEMS* ParamSweep* /tmp diff --git a/examples/parametersweep/firing_rates_GenericMuscleCell.png b/examples/parametersweep/firing_rates_GenericMuscleCell.png index b815c3d9..2c73c552 100644 Binary files a/examples/parametersweep/firing_rates_GenericMuscleCell.png and b/examples/parametersweep/firing_rates_GenericMuscleCell.png differ diff --git a/examples/parametersweep/firing_rates_GenericNeuronCell.png b/examples/parametersweep/firing_rates_GenericNeuronCell.png index 28c9c2ee..ede78a32 100644 Binary files a/examples/parametersweep/firing_rates_GenericNeuronCell.png and b/examples/parametersweep/firing_rates_GenericNeuronCell.png differ diff --git a/examples/parametersweep/firing_rates_GenericNeuronCellX.png b/examples/parametersweep/firing_rates_GenericNeuronCellX.png index fe16f78a..d4b97e5d 100644 Binary files a/examples/parametersweep/firing_rates_GenericNeuronCellX.png and b/examples/parametersweep/firing_rates_GenericNeuronCellX.png differ diff --git a/examples/parametersweep/heatmap_GenericMuscleCell.png b/examples/parametersweep/heatmap_GenericMuscleCell.png index 94368ec6..803eec9a 100644 Binary files a/examples/parametersweep/heatmap_GenericMuscleCell.png and b/examples/parametersweep/heatmap_GenericMuscleCell.png differ diff --git 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diff --git a/examples/summary/images/traces_neuron_activity_Syns_D.png b/examples/summary/images/traces_neuron_activity_Syns_D.png index 441ca47a..f8e4fcbd 100644 Binary files a/examples/summary/images/traces_neuron_activity_Syns_D.png and b/examples/summary/images/traces_neuron_activity_Syns_D.png differ diff --git a/examples/summary/images/traces_neuron_activity_Syns_D1.png b/examples/summary/images/traces_neuron_activity_Syns_D1.png index 5d550683..9d0460f3 100644 Binary files a/examples/summary/images/traces_neuron_activity_Syns_D1.png and b/examples/summary/images/traces_neuron_activity_Syns_D1.png differ diff --git a/examples/summary/summary_A_Full.html b/examples/summary/summary_A_Full.html index 420a4a56..43b60d73 100644 --- a/examples/summary/summary_A_Full.html +++ b/examples/summary/summary_A_Full.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: A; configuration: Full

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_A_Full.md b/examples/summary/summary_A_Full.md index a9f9b358..85768a9c 100644 --- a/examples/summary/summary_A_Full.md +++ b/examples/summary/summary_A_Full.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: A; configuration: Full

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_A_IClamp.html b/examples/summary/summary_A_IClamp.html index 4a490409..4b60e509 100644 --- a/examples/summary/summary_A_IClamp.html +++ b/examples/summary/summary_A_IClamp.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: A; configuration: IClamp

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_A_IClamp.md b/examples/summary/summary_A_IClamp.md index 3d5d2df0..3f3f951c 100644 --- a/examples/summary/summary_A_IClamp.md +++ b/examples/summary/summary_A_IClamp.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: A; configuration: IClamp

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_A_Muscles.html b/examples/summary/summary_A_Muscles.html index f5fdeb4c..dfbf3e21 100644 --- a/examples/summary/summary_A_Muscles.html +++ b/examples/summary/summary_A_Muscles.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: A; configuration: Muscles

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_A_Muscles.md b/examples/summary/summary_A_Muscles.md index 67d5355b..15add46a 100644 --- a/examples/summary/summary_A_Muscles.md +++ b/examples/summary/summary_A_Muscles.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: A; configuration: Muscles

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_A_Oscillator.html b/examples/summary/summary_A_Oscillator.html index 140a6a43..057bced7 100644 --- a/examples/summary/summary_A_Oscillator.html +++ b/examples/summary/summary_A_Oscillator.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: A; configuration: Oscillator

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_A_Oscillator.md b/examples/summary/summary_A_Oscillator.md index c6b5528a..7086d156 100644 --- a/examples/summary/summary_A_Oscillator.md +++ b/examples/summary/summary_A_Oscillator.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: A; configuration: Oscillator

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_A_Pharyngeal.html b/examples/summary/summary_A_Pharyngeal.html index 4e8eff54..fee2e93a 100644 --- a/examples/summary/summary_A_Pharyngeal.html +++ b/examples/summary/summary_A_Pharyngeal.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: A; configuration: Pharyngeal

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_A_Pharyngeal.md b/examples/summary/summary_A_Pharyngeal.md index 960e0db9..a49aa42d 100644 --- a/examples/summary/summary_A_Pharyngeal.md +++ b/examples/summary/summary_A_Pharyngeal.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: A; configuration: Pharyngeal

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_A_Social.html b/examples/summary/summary_A_Social.html index de9f9bf9..4f8dbc40 100644 --- a/examples/summary/summary_A_Social.html +++ b/examples/summary/summary_A_Social.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: A; configuration: Social

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_A_Social.md b/examples/summary/summary_A_Social.md index a827663a..ce9f5649 100644 --- a/examples/summary/summary_A_Social.md +++ b/examples/summary/summary_A_Social.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: A; configuration: Social

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_A_Syns.html b/examples/summary/summary_A_Syns.html index 9ae11868..048d1ebb 100644 --- a/examples/summary/summary_A_Syns.html +++ b/examples/summary/summary_A_Syns.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: A; configuration: Syns

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_A_Syns.md b/examples/summary/summary_A_Syns.md index d7df1a5f..81410efa 100644 --- a/examples/summary/summary_A_Syns.md +++ b/examples/summary/summary_A_Syns.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: A; configuration: Syns

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_B_Full.html b/examples/summary/summary_B_Full.html index f69cd0fe..8208d835 100644 --- a/examples/summary/summary_B_Full.html +++ b/examples/summary/summary_B_Full.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: B; configuration: Full

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_B_Full.md b/examples/summary/summary_B_Full.md index 2cc8c9db..8a48584c 100644 --- a/examples/summary/summary_B_Full.md +++ b/examples/summary/summary_B_Full.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: B; configuration: Full

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_B_IClamp.html b/examples/summary/summary_B_IClamp.html index 7ac33c04..95249cdc 100644 --- a/examples/summary/summary_B_IClamp.html +++ b/examples/summary/summary_B_IClamp.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: B; configuration: IClamp

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_B_IClamp.md b/examples/summary/summary_B_IClamp.md index 2dd37ad2..74709724 100644 --- a/examples/summary/summary_B_IClamp.md +++ b/examples/summary/summary_B_IClamp.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: B; configuration: IClamp

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_B_Muscles.html b/examples/summary/summary_B_Muscles.html index 55cca575..586d98ff 100644 --- a/examples/summary/summary_B_Muscles.html +++ b/examples/summary/summary_B_Muscles.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: B; configuration: Muscles

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_B_Muscles.md b/examples/summary/summary_B_Muscles.md index ac091b9a..2b626833 100644 --- a/examples/summary/summary_B_Muscles.md +++ b/examples/summary/summary_B_Muscles.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: B; configuration: Muscles

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_B_Oscillator.html b/examples/summary/summary_B_Oscillator.html index b67fc53a..99232135 100644 --- a/examples/summary/summary_B_Oscillator.html +++ b/examples/summary/summary_B_Oscillator.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: B; configuration: Oscillator

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_B_Oscillator.md b/examples/summary/summary_B_Oscillator.md index 3805de62..c8e35ee4 100644 --- a/examples/summary/summary_B_Oscillator.md +++ b/examples/summary/summary_B_Oscillator.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: B; configuration: Oscillator

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_B_Pharyngeal.html b/examples/summary/summary_B_Pharyngeal.html index f5c1bd1e..7a598f50 100644 --- a/examples/summary/summary_B_Pharyngeal.html +++ b/examples/summary/summary_B_Pharyngeal.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: B; configuration: Pharyngeal

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_B_Pharyngeal.md b/examples/summary/summary_B_Pharyngeal.md index b8fbd104..3d281e44 100644 --- a/examples/summary/summary_B_Pharyngeal.md +++ b/examples/summary/summary_B_Pharyngeal.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: B; configuration: Pharyngeal

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_B_Social.html b/examples/summary/summary_B_Social.html index 6b5b31af..54c975c7 100644 --- a/examples/summary/summary_B_Social.html +++ b/examples/summary/summary_B_Social.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: B; configuration: Social

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_B_Social.md b/examples/summary/summary_B_Social.md index 48f9caed..f50abf61 100644 --- a/examples/summary/summary_B_Social.md +++ b/examples/summary/summary_B_Social.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: B; configuration: Social

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_B_Syns.html b/examples/summary/summary_B_Syns.html index 9bbff28b..b4372f36 100644 --- a/examples/summary/summary_B_Syns.html +++ b/examples/summary/summary_B_Syns.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: B; configuration: Syns

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_B_Syns.md b/examples/summary/summary_B_Syns.md index d43c1a67..bbacb43e 100644 --- a/examples/summary/summary_B_Syns.md +++ b/examples/summary/summary_B_Syns.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: B; configuration: Syns

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C0_Full.html b/examples/summary/summary_C0_Full.html index b3011662..988d8e50 100644 --- a/examples/summary/summary_C0_Full.html +++ b/examples/summary/summary_C0_Full.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C0; configuration: Full

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C0_Full.md b/examples/summary/summary_C0_Full.md index e1eec87a..b4acbd49 100644 --- a/examples/summary/summary_C0_Full.md +++ b/examples/summary/summary_C0_Full.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C0; configuration: Full

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C0_IClamp.html b/examples/summary/summary_C0_IClamp.html index 1858f3ab..9b42d7ca 100644 --- a/examples/summary/summary_C0_IClamp.html +++ b/examples/summary/summary_C0_IClamp.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C0; configuration: IClamp

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C0_IClamp.md b/examples/summary/summary_C0_IClamp.md index f320e840..66199ff9 100644 --- a/examples/summary/summary_C0_IClamp.md +++ b/examples/summary/summary_C0_IClamp.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C0; configuration: IClamp

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C0_Muscles.html b/examples/summary/summary_C0_Muscles.html index 834148ed..dcec306c 100644 --- a/examples/summary/summary_C0_Muscles.html +++ b/examples/summary/summary_C0_Muscles.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C0; configuration: Muscles

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C0_Muscles.md b/examples/summary/summary_C0_Muscles.md index 81d38d42..704fecad 100644 --- a/examples/summary/summary_C0_Muscles.md +++ b/examples/summary/summary_C0_Muscles.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C0; configuration: Muscles

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C0_Oscillator.html b/examples/summary/summary_C0_Oscillator.html index 9158f335..fa13c6e9 100644 --- a/examples/summary/summary_C0_Oscillator.html +++ b/examples/summary/summary_C0_Oscillator.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C0; configuration: Oscillator

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C0_Oscillator.md b/examples/summary/summary_C0_Oscillator.md index 483472eb..68a02d65 100644 --- a/examples/summary/summary_C0_Oscillator.md +++ b/examples/summary/summary_C0_Oscillator.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C0; configuration: Oscillator

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C0_Pharyngeal.html b/examples/summary/summary_C0_Pharyngeal.html index 69ac8034..d327aa51 100644 --- a/examples/summary/summary_C0_Pharyngeal.html +++ b/examples/summary/summary_C0_Pharyngeal.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C0; configuration: Pharyngeal

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C0_Pharyngeal.md b/examples/summary/summary_C0_Pharyngeal.md index eefb9c67..e10b89d1 100644 --- a/examples/summary/summary_C0_Pharyngeal.md +++ b/examples/summary/summary_C0_Pharyngeal.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C0; configuration: Pharyngeal

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C0_Social.html b/examples/summary/summary_C0_Social.html index 1328e0e5..5df757e9 100644 --- a/examples/summary/summary_C0_Social.html +++ b/examples/summary/summary_C0_Social.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C0; configuration: Social

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C0_Social.md b/examples/summary/summary_C0_Social.md index b353cd87..d7f364dc 100644 --- a/examples/summary/summary_C0_Social.md +++ b/examples/summary/summary_C0_Social.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C0; configuration: Social

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C0_Syns.html b/examples/summary/summary_C0_Syns.html index 728d9a63..fb7673ec 100644 --- a/examples/summary/summary_C0_Syns.html +++ b/examples/summary/summary_C0_Syns.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C0; configuration: Syns

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C0_Syns.md b/examples/summary/summary_C0_Syns.md index 099d9476..a484bd08 100644 --- a/examples/summary/summary_C0_Syns.md +++ b/examples/summary/summary_C0_Syns.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C0; configuration: Syns

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C1_Full.html b/examples/summary/summary_C1_Full.html index 0db014fc..1df87eaa 100644 --- a/examples/summary/summary_C1_Full.html +++ b/examples/summary/summary_C1_Full.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C1; configuration: Full

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C1_Full.md b/examples/summary/summary_C1_Full.md index fae18e7f..3a37c69d 100644 --- a/examples/summary/summary_C1_Full.md +++ b/examples/summary/summary_C1_Full.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C1; configuration: Full

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C1_IClamp.html b/examples/summary/summary_C1_IClamp.html index deefff6d..5ff39b54 100644 --- a/examples/summary/summary_C1_IClamp.html +++ b/examples/summary/summary_C1_IClamp.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C1; configuration: IClamp

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C1_IClamp.md b/examples/summary/summary_C1_IClamp.md index 23ae1b22..3f010510 100644 --- a/examples/summary/summary_C1_IClamp.md +++ b/examples/summary/summary_C1_IClamp.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C1; configuration: IClamp

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C1_Muscles.html b/examples/summary/summary_C1_Muscles.html index 7499c36d..582dde46 100644 --- a/examples/summary/summary_C1_Muscles.html +++ b/examples/summary/summary_C1_Muscles.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C1; configuration: Muscles

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C1_Muscles.md b/examples/summary/summary_C1_Muscles.md index 561cc355..e4fddfca 100644 --- a/examples/summary/summary_C1_Muscles.md +++ b/examples/summary/summary_C1_Muscles.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C1; configuration: Muscles

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C1_Oscillator.html b/examples/summary/summary_C1_Oscillator.html index 4b93de27..e7a8fbfb 100644 --- a/examples/summary/summary_C1_Oscillator.html +++ b/examples/summary/summary_C1_Oscillator.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C1; configuration: Oscillator

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C1_Oscillator.md b/examples/summary/summary_C1_Oscillator.md index e04d7a79..3b7fcec8 100644 --- a/examples/summary/summary_C1_Oscillator.md +++ b/examples/summary/summary_C1_Oscillator.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C1; configuration: Oscillator

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C1_Pharyngeal.html b/examples/summary/summary_C1_Pharyngeal.html index 69e0032e..c1717a68 100644 --- a/examples/summary/summary_C1_Pharyngeal.html +++ b/examples/summary/summary_C1_Pharyngeal.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C1; configuration: Pharyngeal

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C1_Pharyngeal.md b/examples/summary/summary_C1_Pharyngeal.md index 1a9b4d60..a738f28d 100644 --- a/examples/summary/summary_C1_Pharyngeal.md +++ b/examples/summary/summary_C1_Pharyngeal.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C1; configuration: Pharyngeal

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C1_Social.html b/examples/summary/summary_C1_Social.html index 52107d9f..e3b3873d 100644 --- a/examples/summary/summary_C1_Social.html +++ b/examples/summary/summary_C1_Social.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C1; configuration: Social

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C1_Social.md b/examples/summary/summary_C1_Social.md index cdee2bd7..9657e88c 100644 --- a/examples/summary/summary_C1_Social.md +++ b/examples/summary/summary_C1_Social.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C1; configuration: Social

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C1_Syns.html b/examples/summary/summary_C1_Syns.html index a7dab40a..a600ed4d 100644 --- a/examples/summary/summary_C1_Syns.html +++ b/examples/summary/summary_C1_Syns.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C1; configuration: Syns

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C1_Syns.md b/examples/summary/summary_C1_Syns.md index 17fbb096..cac04ecc 100644 --- a/examples/summary/summary_C1_Syns.md +++ b/examples/summary/summary_C1_Syns.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C1; configuration: Syns

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C2_Full.html b/examples/summary/summary_C2_Full.html index e7a3f67d..6d288ba0 100644 --- a/examples/summary/summary_C2_Full.html +++ b/examples/summary/summary_C2_Full.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C2; configuration: Full

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C2_Full.md b/examples/summary/summary_C2_Full.md index dceb0bb0..5a0d8215 100644 --- a/examples/summary/summary_C2_Full.md +++ b/examples/summary/summary_C2_Full.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C2; configuration: Full

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C2_IClamp.html b/examples/summary/summary_C2_IClamp.html index 0d078b24..7a11710e 100644 --- a/examples/summary/summary_C2_IClamp.html +++ b/examples/summary/summary_C2_IClamp.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C2; configuration: IClamp

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C2_IClamp.md b/examples/summary/summary_C2_IClamp.md index 51210017..a9e4ea3d 100644 --- a/examples/summary/summary_C2_IClamp.md +++ b/examples/summary/summary_C2_IClamp.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C2; configuration: IClamp

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C2_Muscles.html b/examples/summary/summary_C2_Muscles.html index c116ca66..97eeee55 100644 --- a/examples/summary/summary_C2_Muscles.html +++ b/examples/summary/summary_C2_Muscles.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C2; configuration: Muscles

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C2_Muscles.md b/examples/summary/summary_C2_Muscles.md index 8019b463..5065414a 100644 --- a/examples/summary/summary_C2_Muscles.md +++ b/examples/summary/summary_C2_Muscles.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C2; configuration: Muscles

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C2_Oscillator.html b/examples/summary/summary_C2_Oscillator.html index f63d712a..7e4e24e4 100644 --- a/examples/summary/summary_C2_Oscillator.html +++ b/examples/summary/summary_C2_Oscillator.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C2; configuration: Oscillator

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C2_Oscillator.md b/examples/summary/summary_C2_Oscillator.md index d8bacc2f..7fbf5cb8 100644 --- a/examples/summary/summary_C2_Oscillator.md +++ b/examples/summary/summary_C2_Oscillator.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C2; configuration: Oscillator

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C2_Pharyngeal.html b/examples/summary/summary_C2_Pharyngeal.html index 838b3a95..fc630cd6 100644 --- a/examples/summary/summary_C2_Pharyngeal.html +++ b/examples/summary/summary_C2_Pharyngeal.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C2; configuration: Pharyngeal

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C2_Pharyngeal.md b/examples/summary/summary_C2_Pharyngeal.md index bcee75ac..98d23edc 100644 --- a/examples/summary/summary_C2_Pharyngeal.md +++ b/examples/summary/summary_C2_Pharyngeal.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C2; configuration: Pharyngeal

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C2_Social.html b/examples/summary/summary_C2_Social.html index 56a0ac79..23f8ae14 100644 --- a/examples/summary/summary_C2_Social.html +++ b/examples/summary/summary_C2_Social.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C2; configuration: Social

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C2_Social.md b/examples/summary/summary_C2_Social.md index 51a18a03..a2aed5ca 100644 --- a/examples/summary/summary_C2_Social.md +++ b/examples/summary/summary_C2_Social.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C2; configuration: Social

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C2_Syns.html b/examples/summary/summary_C2_Syns.html index c8f365af..783e99ee 100644 --- a/examples/summary/summary_C2_Syns.html +++ b/examples/summary/summary_C2_Syns.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C2; configuration: Syns

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C2_Syns.md b/examples/summary/summary_C2_Syns.md index 77f68946..9f5404b1 100644 --- a/examples/summary/summary_C2_Syns.md +++ b/examples/summary/summary_C2_Syns.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C2; configuration: Syns

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C_Full.html b/examples/summary/summary_C_Full.html index f5be8508..39dc397d 100644 --- a/examples/summary/summary_C_Full.html +++ b/examples/summary/summary_C_Full.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C; configuration: Full

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C_Full.md b/examples/summary/summary_C_Full.md index ced187c1..d74134ae 100644 --- a/examples/summary/summary_C_Full.md +++ b/examples/summary/summary_C_Full.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C; configuration: Full

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C_IClamp.html b/examples/summary/summary_C_IClamp.html index 647b71f4..06e2ac69 100644 --- a/examples/summary/summary_C_IClamp.html +++ b/examples/summary/summary_C_IClamp.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C; configuration: IClamp

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C_IClamp.md b/examples/summary/summary_C_IClamp.md index 031a0f5a..45bd36e9 100644 --- a/examples/summary/summary_C_IClamp.md +++ b/examples/summary/summary_C_IClamp.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C; configuration: IClamp

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C_Muscles.html b/examples/summary/summary_C_Muscles.html index 7f94a77f..6890294b 100644 --- a/examples/summary/summary_C_Muscles.html +++ b/examples/summary/summary_C_Muscles.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C; configuration: Muscles

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C_Muscles.md b/examples/summary/summary_C_Muscles.md index 5431a8a4..a9a74e4e 100644 --- a/examples/summary/summary_C_Muscles.md +++ b/examples/summary/summary_C_Muscles.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C; configuration: Muscles

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C_Oscillator.html b/examples/summary/summary_C_Oscillator.html index e8d2df36..b1bc711c 100644 --- a/examples/summary/summary_C_Oscillator.html +++ b/examples/summary/summary_C_Oscillator.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C; configuration: Oscillator

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C_Oscillator.md b/examples/summary/summary_C_Oscillator.md index 7862d535..5b498c21 100644 --- a/examples/summary/summary_C_Oscillator.md +++ b/examples/summary/summary_C_Oscillator.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C; configuration: Oscillator

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C_Pharyngeal.html b/examples/summary/summary_C_Pharyngeal.html index 068577cf..71d07a53 100644 --- a/examples/summary/summary_C_Pharyngeal.html +++ b/examples/summary/summary_C_Pharyngeal.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C; configuration: Pharyngeal

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C_Pharyngeal.md b/examples/summary/summary_C_Pharyngeal.md index 376fb64d..f7748170 100644 --- a/examples/summary/summary_C_Pharyngeal.md +++ b/examples/summary/summary_C_Pharyngeal.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C; configuration: Pharyngeal

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C_Social.html b/examples/summary/summary_C_Social.html index ea9a4fad..28c5ac9f 100644 --- a/examples/summary/summary_C_Social.html +++ b/examples/summary/summary_C_Social.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C; configuration: Social

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C_Social.md b/examples/summary/summary_C_Social.md index bd54a37a..6af65b52 100644 --- a/examples/summary/summary_C_Social.md +++ b/examples/summary/summary_C_Social.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C; configuration: Social

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C_Syns.html b/examples/summary/summary_C_Syns.html index ff4b49e4..870019b5 100644 --- a/examples/summary/summary_C_Syns.html +++ b/examples/summary/summary_C_Syns.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: C; configuration: Syns

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_C_Syns.md b/examples/summary/summary_C_Syns.md index c5f84c83..2ea5a775 100644 --- a/examples/summary/summary_C_Syns.md +++ b/examples/summary/summary_C_Syns.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: C; configuration: Syns

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D1_Full.html b/examples/summary/summary_D1_Full.html index a0bd653b..b26515a0 100644 --- a/examples/summary/summary_D1_Full.html +++ b/examples/summary/summary_D1_Full.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: D1; configuration: Full

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D1_Full.md b/examples/summary/summary_D1_Full.md index 21b207e0..7d73874f 100644 --- a/examples/summary/summary_D1_Full.md +++ b/examples/summary/summary_D1_Full.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: D1; configuration: Full

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D1_IClamp.html b/examples/summary/summary_D1_IClamp.html index cf343d83..3beac717 100644 --- a/examples/summary/summary_D1_IClamp.html +++ b/examples/summary/summary_D1_IClamp.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: D1; configuration: IClamp

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D1_IClamp.md b/examples/summary/summary_D1_IClamp.md index d7c617d1..2f3d3dcf 100644 --- a/examples/summary/summary_D1_IClamp.md +++ b/examples/summary/summary_D1_IClamp.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: D1; configuration: IClamp

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D1_Muscles.html b/examples/summary/summary_D1_Muscles.html index 4855f697..547852a6 100644 --- a/examples/summary/summary_D1_Muscles.html +++ b/examples/summary/summary_D1_Muscles.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: D1; configuration: Muscles

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D1_Muscles.md b/examples/summary/summary_D1_Muscles.md index 58c39d03..a3102aa9 100644 --- a/examples/summary/summary_D1_Muscles.md +++ b/examples/summary/summary_D1_Muscles.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: D1; configuration: Muscles

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D1_Oscillator.html b/examples/summary/summary_D1_Oscillator.html index 394b367d..c148c14b 100644 --- a/examples/summary/summary_D1_Oscillator.html +++ b/examples/summary/summary_D1_Oscillator.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: D1; configuration: Oscillator

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D1_Oscillator.md b/examples/summary/summary_D1_Oscillator.md index b58b4a61..7180622f 100644 --- a/examples/summary/summary_D1_Oscillator.md +++ b/examples/summary/summary_D1_Oscillator.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: D1; configuration: Oscillator

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D1_Pharyngeal.html b/examples/summary/summary_D1_Pharyngeal.html index 04c0859c..b23dc02f 100644 --- a/examples/summary/summary_D1_Pharyngeal.html +++ b/examples/summary/summary_D1_Pharyngeal.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: D1; configuration: Pharyngeal

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D1_Pharyngeal.md b/examples/summary/summary_D1_Pharyngeal.md index a36c264f..f6a2e0d9 100644 --- a/examples/summary/summary_D1_Pharyngeal.md +++ b/examples/summary/summary_D1_Pharyngeal.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: D1; configuration: Pharyngeal

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D1_Social.html b/examples/summary/summary_D1_Social.html index b8cb6838..8fdd00c4 100644 --- a/examples/summary/summary_D1_Social.html +++ b/examples/summary/summary_D1_Social.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: D1; configuration: Social

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D1_Social.md b/examples/summary/summary_D1_Social.md index 4f378884..012eafda 100644 --- a/examples/summary/summary_D1_Social.md +++ b/examples/summary/summary_D1_Social.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: D1; configuration: Social

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D1_Syns.html b/examples/summary/summary_D1_Syns.html index 98851829..bb9a3735 100644 --- a/examples/summary/summary_D1_Syns.html +++ b/examples/summary/summary_D1_Syns.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: D1; configuration: Syns

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D1_Syns.md b/examples/summary/summary_D1_Syns.md index fb421f52..22821558 100644 --- a/examples/summary/summary_D1_Syns.md +++ b/examples/summary/summary_D1_Syns.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: D1; configuration: Syns

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D_Full.html b/examples/summary/summary_D_Full.html index 90555785..c7b03f9c 100644 --- a/examples/summary/summary_D_Full.html +++ b/examples/summary/summary_D_Full.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: D; configuration: Full

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D_Full.md b/examples/summary/summary_D_Full.md index 50c9c589..ca374423 100644 --- a/examples/summary/summary_D_Full.md +++ b/examples/summary/summary_D_Full.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: D; configuration: Full

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D_IClamp.html b/examples/summary/summary_D_IClamp.html index 0de4f350..f7c77cdb 100644 --- a/examples/summary/summary_D_IClamp.html +++ b/examples/summary/summary_D_IClamp.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: D; configuration: IClamp

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D_IClamp.md b/examples/summary/summary_D_IClamp.md index 53cce924..81ea5b19 100644 --- a/examples/summary/summary_D_IClamp.md +++ b/examples/summary/summary_D_IClamp.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: D; configuration: IClamp

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D_Muscles.html b/examples/summary/summary_D_Muscles.html index 79fc102c..9adb51e4 100644 --- a/examples/summary/summary_D_Muscles.html +++ b/examples/summary/summary_D_Muscles.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: D; configuration: Muscles

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D_Muscles.md b/examples/summary/summary_D_Muscles.md index 136799d3..2693fa9b 100644 --- a/examples/summary/summary_D_Muscles.md +++ b/examples/summary/summary_D_Muscles.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: D; configuration: Muscles

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D_Oscillator.html b/examples/summary/summary_D_Oscillator.html index bd53a7bc..96967423 100644 --- a/examples/summary/summary_D_Oscillator.html +++ b/examples/summary/summary_D_Oscillator.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: D; configuration: Oscillator

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D_Oscillator.md b/examples/summary/summary_D_Oscillator.md index 7894c790..159e7661 100644 --- a/examples/summary/summary_D_Oscillator.md +++ b/examples/summary/summary_D_Oscillator.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: D; configuration: Oscillator

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D_Pharyngeal.html b/examples/summary/summary_D_Pharyngeal.html index 8e622165..d1918f55 100644 --- a/examples/summary/summary_D_Pharyngeal.html +++ b/examples/summary/summary_D_Pharyngeal.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: D; configuration: Pharyngeal

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D_Pharyngeal.md b/examples/summary/summary_D_Pharyngeal.md index 6e3f3d29..e06b584a 100644 --- a/examples/summary/summary_D_Pharyngeal.md +++ b/examples/summary/summary_D_Pharyngeal.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: D; configuration: Pharyngeal

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D_Social.html b/examples/summary/summary_D_Social.html index 41fec1e6..ffddcfd7 100644 --- a/examples/summary/summary_D_Social.html +++ b/examples/summary/summary_D_Social.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: D; configuration: Social

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D_Social.md b/examples/summary/summary_D_Social.md index 2d489994..8057a2ab 100644 --- a/examples/summary/summary_D_Social.md +++ b/examples/summary/summary_D_Social.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: D; configuration: Social

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D_Syns.html b/examples/summary/summary_D_Syns.html index 813c9029..777cfdf4 100644 --- a/examples/summary/summary_D_Syns.html +++ b/examples/summary/summary_D_Syns.html @@ -1,6 +1,6 @@

c302 simulation

Parameter set: D; configuration: Syns

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/examples/summary/summary_D_Syns.md b/examples/summary/summary_D_Syns.md index acdef68f..7eb2d941 100644 --- a/examples/summary/summary_D_Syns.md +++ b/examples/summary/summary_D_Syns.md @@ -1,7 +1,7 @@ ### Parameter config summary

c302 simulation

Parameter set: D; configuration: Syns

-

Generated on: Wed, 31 Jan 2024 with c302 v0.7.12


+

Generated on: Tue, 14 Jan 2025 with c302 v0.9.1


diff --git a/test.sh b/test.sh index 014a7e21..a553f4e9 100755 --- a/test.sh +++ b/test.sh @@ -1,5 +1,7 @@ set -ex +ruff format **/*.py + pip install . ## Test readers