Repositories list

• openMINDS_Python

  Public
  Python package for the openMINDS metadata models. The package contains all openMINDS schemas as Python classes in addition to schema base classes and utility methods.

  targetopenmindsprogramming-package

  Python

  •

  MIT License

  •2•1•12•1•Updated Feb 11, 2025Feb 11, 2025

• openMINDS

  Public
  Complete collection of schemas for the metadata models of the openMINDS metadata framework. All schemas are formatted in the openMINDS syntax (*.schema.omi.json).

  openminds

  MIT License

  •3•0•15•0•Updated Feb 11, 2025Feb 11, 2025

• openMINDS_neuroimaging

  Public
  A metadata model for MRI experiments; an openMINDS extension

  openmindsschema-module

  MIT License

  •2•0•1•0•Updated Feb 11, 2025Feb 11, 2025

• openMINDS_instances

  Public
  Well defined metadata instances for selected schemas of the openMINDS metadata models.

  openminds

  Python

  •

  MIT License

  •11•0•74•56•Updated Feb 11, 2025Feb 11, 2025

• openMINDS_controlledTerms

  Public
  Metadata model for the consistent registration of well-defined terms as well as a corresponding library of terminologies (including links to ontological terms where applicable).

  openmindsschema-module

  MIT License

  •12•7•4•0•Updated Feb 10, 2025Feb 10, 2025

• openMINDS_documentation

  Public
  Read-The-Docs documentation for the openMINDS metadata framework.

  targetopenminds

  MIT License

  •3•0•23•3•Updated Feb 7, 2025Feb 7, 2025

• openMINDS_MATLAB

  Public
  MATLAB package for the openMINDS metadata models. The package contains all openMINDS schemas as MATLAB classes in addition to schema base classes and utility methods

  metadataneurosciencetarget+ 2openmindsprogramming-package

  MATLAB

  •

  MIT License

  •3•3•10•1•Updated Feb 5, 2025Feb 5, 2025

• openMINDS_JSON-Schema

  Public
  Complete collection of schemas for the metadata models of the openMINDS metadata framework. All schemas are formatted in JSON-Schema (*.schema.json).

  targetschema-formatopenminds

  MIT License

  •2•0•2•0•Updated Feb 5, 2025Feb 5, 2025

• openMINDS_core

  Public
  The openMINDS core metadata model includes schemas that can be used to describe the general origin, location and content of research products.

  openmindsschema-module

  MIT License

  •19•20•30•3•Updated Feb 4, 2025Feb 4, 2025

• openMINDS_publications

  Public
  A metadata model for scholarly publications in neuroscience, including live papers

  openmindsschema-module

  MIT License

  •2•0•2•1•Updated Feb 3, 2025Feb 3, 2025

• openMINDS_chemicals

  Public
  A metadata model for capturing in-depth descriptions of chemical substances and mixtures.

  openmindsschema-module

  MIT License

  •2•2•3•0•Updated Feb 3, 2025Feb 3, 2025

• openMINDS_actions

  Public
  MIT License

  •1•0•0•0•Updated Jan 29, 2025Jan 29, 2025

• openMINDS_computation

  Public
  A metadata model for simulation, data analysis and visualization provenance in neuroscience

  openmindsschema-module

  MIT License

  •4•0•0•0•Updated Jan 29, 2025Jan 29, 2025

• openMINDS_OWL

  Public
  Complete collection of schemas for the metadata models of the openMINDS metadata framework. All schemas are formatted in OWL (*.owl).

  MIT License

  •1•0•0•0•Updated Jan 24, 2025Jan 24, 2025

• openMINDS_SANDS

  Public
  A metadata model capturing Spatial Anchoring of Neuroscience Data Structures, including brain atlas definitions.

  openmindsschema-module

  Python

  •

  MIT License

  •11•12•9•1•Updated Nov 12, 2024Nov 12, 2024

• bids2openminds

  Public
  A tool to generate openMINDS metadata from BIDS datasets

  converteropenminds

  Python

  •

  MIT License

  •4•2•14•2•Updated Oct 7, 2024Oct 7, 2024

• openMINDS_ephys

  Public
  A metadata model for capturing in-depth descriptions of electrophysiology experiments.

  openmindsschema-module

  MIT License

  •6•5•0•0•Updated Sep 24, 2024Sep 24, 2024

• openMINDS_specimenPrep

  Public
  A metadata model capturing in-depth descriptions of specimen preparations.

  openmindsschema-module

  MIT License

  •2•1•0•1•Updated Sep 24, 2024Sep 24, 2024

• openMINDS_stimulation

  Public
  A metadata model capturing in-depth descriptions of stimuli and stimulation protocols in neuroscience.

  openmindsschema-module

  MIT License

  •3•1•1•0•Updated Sep 24, 2024Sep 24, 2024

• .github

  Public
  README repository for openMetadataInitiative organization.

  0•0•0•0•Updated Sep 23, 2024Sep 23, 2024

• openMINDS_LinkML

  Public
  Complete collection of schemas for the metadata models of the openMINDS metadata framework. All schemas are formatted in LinkML (*.yaml).

  targetschema-formatopenminds

  MIT License

  •1•1•0•1•Updated Feb 8, 2024Feb 8, 2024

• openMINDS_Java

  Public
  A Java library for openMINDS

  targetopenmindsprogramming-package

  Java

  •0•0•0•0•Updated Nov 30, 2023Nov 30, 2023