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matlab_utilities_template.html
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<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
<!-- saved from url=(0069)http://www.broadinstitute.org/~orzuk/matlab/matlab_utilities_template.html -->
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<LINK rel="stylesheet" href="http://www.broadinstitute.org/~orzuk/orzuk.css" type="text/css">
<TITLE>Matlab Template Utilities</TITLE>
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<H2>Matlab Template Utilities</H2>
<UL>
<LI> Matlab Template Utilities (see documentation and examples within the functions)</LI>
</UL>
<!-- <p>Changes are now logged in the <a href="http://home.online.no/%7Epjacklam/matlab/software/util/statutil/ChangeLog">ChangeLog</a> file.</p>--><!-- Begin m-file index -->
<!-- This table was automatically generated -->
<!-- by updhtml.pl on Sat Feb 21 14:26:51 2004 -->
<TABLE summary="M-file index" border="0" cellpadding="0" cellspacing="0">
<TBODY><TR>
</TR><TR>
<TD><A href="http://www.broadinstitute.org/~orzuk/matlab/FDR_R_to_q.m" name="FDR_R_to_q" id="FDR_R_to_q">FDR_R_to_q.m</A></TD>
<TD> - </TD>
<TD>Compute the FDR for a given number of rejections.</TD>
</TR>
<TR>
<TD><A href="http://www.broadinstitute.org/~orzuk/matlab/FDR_q_to_R.m" name="FDR_q_to_R" id="FDR_q_to_R">FDR_q_to_R.m</A></TD>
<TD> - </TD>
<TD>Compute the number of rejected hypothesis for a given FDR level.</TD>
</TR>
<TR>
<TD><A href="http://www.broadinstitute.org/~orzuk/matlab/m0_estimator.m" name="m0_estimator" id="m0_estimator">m0_estimator.m</A></TD>
<TD> - </TD>
<TD>Estimate the number of true null hypotheses (m<SUB>0</SUB>) from the data.</TD>
</TR>
<TR>
<TD><A href="http://www.broadinstitute.org/~orzuk/matlab/FDR_correct_const.m" name="FDR_correct_const" id="FDR_correct_const">FDR_correct_const.m</A></TD>
<TD> - </TD>
<TD>Compute universal correction constants for the improved estimator.</TD>
</TR>
<TR>
<TD><A href="http://www.broadinstitute.org/~orzuk/matlab/FDR_generate_figs.m" name="FDR_generate_figs" id="FDR_generate_figs">FDR_generate_figs.m</A></TD>
<TD> - </TD>
<TD>Simulate data and generate figures (the one appearing in the paper).</TD>
</TR>
<TR>
<TD><A href="http://www.broadinstitute.org/~orzuk/matlab/FDR_test.m" name="FDR_test" id="FDR_test">FDR_test.m</A></TD>
<TD> - </TD>
<TD>A small script with usage examples for the package functions.</TD>
</TR>
<TR>
<TD><A href="http://www.broadinstitute.org/~orzuk/matlab/IBH_FDR.rar" name="IBH_FDR" id="IBH_FDR"><EM>IBH_FDR.rar</EM></A></TD>
<TD> - </TD>
<TD><b><em>Download the whole package.</em></b></TD>
</TR>
<TR>
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<ADDRESS>
Contact: <BR>
O. Zuk (<A href="mailto:[email protected]">[email protected]</A>) <!-- hhmts end -->
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