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Hello, I wondered if Longshot suitable for phasing HiFi reads from a AAB-type triploid plant species? Right now it's running under the settings of longshot -r $i -y 20 -O reads.$i.bam --bam ccs.map2ref.sorted.bam --ref ref.fasta --out longshot.call.$i.VCF. I would like to hear your opinion and suggestions. Thanks a lot! Best, Tao
The text was updated successfully, but these errors were encountered:
Hello, I wondered if Longshot suitable for phasing HiFi reads from a AAB-type triploid plant species? Right now it's running under the settings of
longshot -r $i -y 20 -O reads.$i.bam --bam ccs.map2ref.sorted.bam --ref ref.fasta --out longshot.call.$i.VCF
. I would like to hear your opinion and suggestions. Thanks a lot! Best, TaoThe text was updated successfully, but these errors were encountered: