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bump version, update gha
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rpetit3 authored Aug 14, 2024
1 parent f04b6b7 commit 76e5173
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2 changes: 1 addition & 1 deletion .github/workflows/test-pasty.yml
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Expand Up @@ -27,7 +27,7 @@ jobs:

- name: Setup pasty Environment
run: |
conda install -y -c conda-forge -c bioconda 'camlhmp>=0.2.2'
conda install -y -c conda-forge -c bioconda 'camlhmp>=0.3.1'
- name: Environment Information
run: uname -a && env
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6 changes: 6 additions & 0 deletions CHANGELOG.md
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@@ -1,5 +1,11 @@
# Releases

## v2.0.1 rpetit3/pasty "19BR" - 2024/08/14

- updated for latest changes in camlhmp
- updated GHA workflow


## v2.0.0 rpetit3/pasty "PACS2" - 2024/07/22

- `pasty` now uses the `camlhmp` framework for classification
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4 changes: 2 additions & 2 deletions data/pa-osa.yaml
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Expand Up @@ -5,14 +5,14 @@ metadata:
id: "pasty" # id of the schema
name: "P. aeruginosa serogrouping" # name of the schema
description: "Serogrouping of Pseudomonas aeruginosa isolates" # description of the schema
version: "2.0.0" # version of the schema
version: "2.0.1" # version of the schema
curators: # A list of curators of the schema
- "Robert A. Petit III"

# engine provides information about the tool and parameters used
engine:
type: blast # The type of tool used to generate the data
tool: blastn # The tool used to generate the data
type: blast

# targets provides a list of sequence targets (primers, genes, proteins, etc...)
targets:
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