virfinddb db not downloading properly

[karinlag]

We are getting the same problem with this db as was reported in #225 .

Hope you can manage to resolve these issues 🙂

[martinghunt]

Which version of ariba did you use? I just downloaded latest 2.12.1 and it works for me...

$ ariba getref virulencefinder zzz
Using this git commit for virulencefinder database:
commit 43ee5ed9cfdacd190dda1970405eccd508fe0918 (HEAD -> master, origin/master, origin/HEAD)
Author: Kim Ng <[email protected]>
Date:   Fri Dec 15 13:11:25 2017 +0100

    notes update
Combining downloaded fasta files...
    s.aureus_exoenzyme.fsa
    s.aureus_hostimm.fsa
    virulence_ecoli.fsa
    s.aureus_toxin.fsa
    listeria.fsa
    stx.fsa
    virulence_ent.fsa

[kpepper]

See closing comments for issue #225.