From 0f8adad742980e04be7ba0a02dd15fc7cbb9d454 Mon Sep 17 00:00:00 2001 From: martinghunt Date: Thu, 12 Feb 2015 11:36:00 +0000 Subject: [PATCH] Add velvet to dependencies --- README.md | 2 ++ 1 file changed, 2 insertions(+) diff --git a/README.md b/README.md index 670cde89..55990e56 100644 --- a/README.md +++ b/README.md @@ -12,6 +12,7 @@ Dependencies: * [SSPACE-basic scaffolder] [sspace] * [GapFiller] [gapfiller] * [SMALT] [smalt] + * [Velvet] [velvet] Install with pip: @@ -51,3 +52,4 @@ To run the pipeline to identify the genes present in a pair of FASTQ files: [sspace]: http://www.baseclear.com/genomics/bioinformatics/basetools/SSPACE [gapfiller]: http://www.baseclear.com/genomics/bioinformatics/basetools/gapfiller [samtools]: http://www.htslib.org/ + [velvet]: http://www.ebi.ac.uk/~zerbino/velvet/