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Copy path_Autoreport.Rmd
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_Autoreport.Rmd
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# autoreport
```
print(paste0( Git Update Started at: , Sys.time()))
CommitMessage <- paste( updated on: , Sys.time(), sep = )
wd <- ~/serdarbalci
setorigin <- git remote set-url origin [email protected]:sbalci/MyJournalWatch.git \n
gitCommand <- paste( cd , wd, \n git add . \n git commit --message ' , CommitMessage, ' \n , setorigin, git push origin master \n , sep = )
system(command = paste(gitCommand, \n ) , intern = TRUE, wait = TRUE)
Sys.sleep(5)
print(paste0( Git Update Ended at: , Sys.time()))
```
## Describe results of analysis
Copy/paste t-tests Directly to Manuscripts: https://neuropsychology.github.io/psycho.R//2018/06/19/analyze_ttest.html
https://github.com/neuropsychology/psycho.R
```
{ eval=FALSE, include=FALSE, echo=TRUE}
# Load packages
library(tidyverse)
# devtools::install_github( neuropsychology/psycho.R ) # Install the latest psycho version
library(psycho)
```
```
{ eval=FALSE, include=FALSE, echo=TRUE}
df <- psycho::affective # Load the data
df
```
```
{ eval=FALSE, include=FALSE, echo=TRUE}
results <- t.test(df$Age ~ df$Sex) # Perform a simple t-test
results
```
```
{ eval=FALSE, include=FALSE, echo=TRUE}
psycho::analyze(results)
```
```
{ eval=FALSE, include=FALSE, echo=TRUE}
t.test(df$Adjusting ~ df$Sex,
var.equal=TRUE,
conf.level = .90) %>%
psycho::analyze()
```
```
{ eval=FALSE, include=FALSE, echo=TRUE}
t.test(df$Adjusting,
mu = 0,
conf.level = .90) %>%
psycho::analyze()
```
```
{ eval=FALSE, include=FALSE, echo=TRUE}
t.test(df$Adjusting ~ df$Sex) %>%
psycho::analyze() %>%
summary()
```
# citation
```
{ PubMed references, eval=FALSE, include=FALSE, echo=TRUE}
PMID_25783680 <- RefManageR::ReadPubMed( 25783680 , database = PubMed )
cit_25783680 <- paste0(PMID_25783680$title, , PMID_25783680$journal, , PMID: https://www.ncbi.nlm.nih.gov/pubmed/?term= , PMID_25783680$eprint, , doi: https://doi.org/ , PMID_25783680$doi)
```
My next citation is here^[ r cit_25783680 ].
```
{ dimension badge, eval=FALSE, include=FALSE, echo=TRUE}
PMID_25783680 <- RefManageR::ReadPubMed( 25783680 , database = PubMed )
dimensionBadge <- paste0(
<script async='' charset='utf-8' src='https://badge.dimensions.ai/badge.js'></script>
<span class='__dimensions_badge_embed__' data-doi=' ,
PMID_25783680$doi,
' data-style='small_circle'></span>
)
```
r dimensionBadge
```
{ eval=FALSE, include=FALSE, echo=TRUE}
PMID_25783680 <- RefManageR::ReadPubMed( 25783680 , database = PubMed )
altmetricBadge <- paste0(
<script type='text/javascript' src='https://d1bxh8uas1mnw7.cloudfront.net/assets/embed.js'></script>
<span class='altmetric-embed' data-badge-popover='right' data-badge-type='donut' data-doi=' ,
PMID_25783680$doi,
'></span>
)
```
r altmetricBadge