main.yml

name: CI
on: push

jobs:
  build:
    runs-on: ${{ matrix.os }}
    strategy:
      matrix:
        os: ['ubuntu-latest']
        perl: [ '5.30' ]
    name: Perl ${{ matrix.perl }} on ${{ matrix.os }}
    steps:
    - uses: actions/checkout@v3
    - name: Set up GitHub Action
      uses: shogo82148/actions-setup-perl@v1
      with:
        perl-version: ${{ matrix.perl }}

    - name: Install core dependencies
      run: sudo apt install -y build-essential lib32z1 git ncbi-blast+ curl

    - name: Get Perl version
      run: perl -V

    - name: Install Perl deps for Codecov
      run: cpanm --quiet --notest App::cpm Module::Build Devel::Cover Devel::Cover::Report::Codecov

    - name: Install Transposome deps
      run: cpm install -g

    - name: Build and test Transposome
      env:
          CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
      run: perl Makefile.PL && make && cover -test -report codecov