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HP encoding is yet another lossy encoding like Dayhoff (#689) that encodes the amino acids into a binary encoding as implemented here. Here's a little table:
Amino acid
Property
Dayhoff
Hydrophobic-polar (hp)
C
Sulfur polymerization
a
p
A, G, P, S, T
Small
b
A, G, P: h S,T: p
D, E, N, Q
Acid and amide
c
p
H, K, R
Basic
d
p
I, L, M, V
Hydrophobic
e
h
F, W, Y
Aromatic
f
h
The text was updated successfully, but these errors were encountered:
HP encoding is yet another lossy encoding like Dayhoff (#689) that encodes the amino acids into a binary encoding as implemented here. Here's a little table:
The text was updated successfully, but these errors were encountered: