_site.yml

name : "PDA"
title : "Proteomics Data Analysis (PDA)"
navbar:
  title: "PDA"
  left:
    - icon: fa-home
      href: index.html
    - text: "Topics"
      icon: fa-chalkboard-teacher
      menu:
      - text: Experimental Design
        href: pda_experimentalDesign1.html
      - text: Quantification - Preprocessing
        href: pda_quantification_preprocessing.html
      - text: Wrap-up Preprocessing - Peptide-Level-Models
        href: pda_robustSummarisation_peptideModels.html
      - text: Quantification - Differential Abundance Analysis
        href: pda_quantification_inference.html
      - text: Wrap-up DA - Blocking
        href: pda_blocking_wrapup.html
    - text: "Exercises"
      icon: fa-laptop
      menu:
      - text: Quantification - Preprocessing
        href: pda_tutorialPreprocessing.html
      - text: Quantification - Design
        href: pda_tutorialDesign.html
  right:
    - icon: fab fa-github      
      href: https://github.com/statOmics/PDA
    - text: "statOmics"
      href: http://statomics.github.io/
output:
  html_document:
      code_download: true
      df_print: paged
      theme: flatly
      highlight: tango
      toc: true
      toc_float: true
      number_sections: true
      code_folding: show
      include:
        after_body: footer.html
      css: style.css
new_session: true
exclude: ["renv.lock", "update_install_R.R", "install.R"]