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<!DOCTYPE html>
<html lang="en"><head><meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<meta charset="utf-8">
<title>Chen Li</title>
<link href="./templates/css" rel="stylesheet" type="text/css">
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#me { border : 0 solid black; border-radius : 5px; }
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<div id="ccc_image" class="two"><img id="me" src="./personal_pic.jpg" width="240px" /></div>
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<h3 style="margin-bottom: 0.5;">Chen Li</h3>
<h6 style="margin-bottom: 0;">PhD candidate</h6>
<h6 style="margin-bottom: 0;"><a href="https://github.com/TopoXLab">TopoXLab</a></h6>
<h6 style="margin-bottom: 0;"><a href="https://bmi.stonybrookmedicine.edu/">Dept of Biomedical Informatics</a></h6>
<h6 style="margin-bottom: 0;">Stony Brook University</h6>
<!-- </h5>Computer Vision, Machine Learning, Medical Imaging and Topological Data Analysis</h5> -->
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<body><!--
<h4><font color="red">I am on the academic job market!</font></h4>
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<p>I am currently a PhD Candidate at the Department of Biomedical Informatics at Stony Brook University, advised by <a href="https://chaochen.github.io/">Prof.Chao Chen</a>. During my PhD, I have also worked closely with <a href="https://huxiaoling.github.io/">Dr.Xiaoling Hu</a>.<br />
<p> Before that, I obtained my master and bachelor degrees from Stony Brook University and Jilin University, respectively. <br />
<!-- Before joining Stony Brook University, I also spent half a year working with <a href="https://scholar.google.com/citations?user=nFhLmFkAAAAJ&hl=en">Dr. Yu-Wing Tai</a> at Tencent Youtu Lab. -->
<br /><strong>Research Interests:</strong> My research interest lies in the intersection of uncertainty estimation, semi-supervised learning and crowd counting. In particular, I am interested in:
<!-- <strong>1)</strong> learning topological/geometric representations for deep image understanding, <strong>2)</strong> uncertainty estimation, and <strong>3)</strong> learning with imperfect data. -->
<ol>
<dd> <strong><li>Uncertainty Estimation and Its Applications </li>
<dd> <li>Semi-supervised learning</li>
<dd> <li>Crowd counting</li> </strong>
</ol>
<strong>Email Address:</strong> li.chen.8 at stonybrook dot edu
<!-- <br /><br /><strong>Contact Address:</strong> Old Computer Science Building 2314, Stony Brook, NY -->
<br /><br />
<!-- <a href="mailto:[email protected]">Email</a> / -->
<a href="./ChenLi_CV.pdf">CV</a> / <a href="https://scholar.google.com/citations?user=GvxAiokAAAAJ&hl=en">Scholar</a> / <a href="https://github.com/superlc1995">Github</a></p>
<h4>Publications</h4>
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<div id="ccc_image" class="two"><img src="miccai2024.png" width="250px" height="125px" /></div>
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<p><strong>Spatial diffusion for cell layout generation</strong><br /><font size = "2.8"><u>Chen Li</u>, Xiaoling Hu, Shahira Abousamra, Meilong Xu, Chao Chen<br />
<em>International Conference on Medical Image Computing and Computer-Assisted Intervention (<strong>MICCAI</strong>)</em>, 2024<br>
<a href="https://arxiv.org/pdf/2409.03106"> Paper
<!-- <a href="https://openreview.net/forum?id=sOXU-PEJSgQ"> OpenReview -->
<a href="https://github.com/superlc1995/Diffusion-cell"> Code
<!-- <a href="https://iclr.cc/media/PosterPDFs/ICLR%202023/11373.png?t=1682304894.9199634"> Poster -->
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<div id="ccc_image" class="two"><img src="crowd_count_git.png" width="250px" height="120px" /></div>
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<p><strong>Calibrating Uncertainty for Semi-Supervised Crowd Counting</strong><br /><font size = "2.8"><u>Chen Li</u>, Xiaoling Hu, Shahira Abousamra, Chao Chen<br />
<!-- <em>Under review</em> -->
<em>International Conference on Computer Vision (<strong>ICCV</strong>)</em>, 2023 <br>
<a href="https://arxiv.org/pdf/2308.09887v1.pdf"> Paper
<a href="https://github.com/superlc1995/Calibrating_count"> Code
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<div id="ccc_image" class="two"><img src="iclr2023_saple.png" width="250px" height="125px" /></div>
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<p><strong>Confidence Estimation Using Unlabeled Data</strong><br /><font size = "2.8"><u>Chen Li</u>, Xiaoling Hu, Chao Chen<br />
<em>International Conference on Learning Representations (<strong>ICLR</strong>)</em>, 2023<br>
<a href="https://openreview.net/pdf?id=sOXU-PEJSgQ"> Paper
<a href="https://openreview.net/forum?id=sOXU-PEJSgQ"> OpenReview
<a href="https://github.com/TopoXLab/consistency-ranking-loss"> Code
<a href="https://iclr.cc/media/PosterPDFs/ICLR%202023/11373.png?t=1682304894.9199634"> Poster
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<div id="ccc_image" class="two"><img src="cancer_travis.png" width="250px" height="125px" /></div>
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<p><strong>Spatial Transcriptomic Analysis Reveals Associations between Genes and Cellular Topology in Breast and Prostate Cancers</strong><br /><font size = "2.8">Alsaleh, Lujain and <u>Li, Chen</u> and Couetil, Justin L and Ye, Ze and Huang, Kun and Zhang, Jie and Chen, Chao and Johnson, Travis S<br />
<em>Cancers</em>, 2022<br>
<a href="https://www.mdpi.com/2072-6694/14/19/4856/pdf"> Paper
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