Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

read_gff3 makes all features introns of ID tag is missing #51

Closed
thackl opened this issue Feb 19, 2021 · 0 comments
Closed

read_gff3 makes all features introns of ID tag is missing #51

thackl opened this issue Feb 19, 2021 · 0 comments
Assignees
Labels
bug Something isn't working

Comments

@thackl
Copy link
Owner

thackl commented Feb 19, 2021

Currently, features are grouped by type and feat_id. However, in some gff, ID (which is harmonized to feat_id), is missing. That leads to feat_id=NA, and, thus, a single big group with all features...

Needs some form of fallback ID for is.na(ID) cases.

@thackl thackl added the bug Something isn't working label Feb 19, 2021
@thackl thackl self-assigned this Feb 19, 2021
@thackl thackl closed this as completed in 675c9df Feb 19, 2021
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
bug Something isn't working
Projects
None yet
Development

No branches or pull requests

1 participant