refs.bib

@article{descamps2016paper,
  title={At-sea distribution and prey selection of {Antarctic} petrels and commercial krill fisheries},
  author={Descamps, S{\'e}bastien and Tarroux, Arnaud and Cherel, Yves and Delord, Karine and God{\o}, Olaf Rune and Kato, Akiko and Krafft, Bj{\o}rn A and Lorentsen, Svein-H{\aa}kon and Ropert-Coudert, Yan and Skaret, Georg and others},
  journal={PloS one},
  volume={11},
  number={8},
  pages={e0156968},
  year={2016},
  publisher={Public Library of Science San Francisco, CA USA}
}

@misc{descamps2016data,
  title = {Data from: {At}-sea distribution and prey selection of {Antarctic} petrels and commercial krill fisheries},
  author = {Descamps, S and Tarroux, A and Cherel, Y and Delord, K and Godø, OR and Kato, A and Krafft, BA and Lorentsen, S and Ropert-Coudert, Y and Skaret, G and Varpe, Ø},
  year = {2016},
  URL = {http://dx.doi.org/10.5441/001/1.q4gn4q56},
  doi = {doi:10.5441/001/1.q4gn4q56},
  publisher = {Movebank data repository}
}

@article{langrock2012,
  title={Flexible and practical modeling of animal telemetry data: hidden {Markov} models and extensions},
  author={Langrock, Roland and King, Ruth and Matthiopoulos, Jason and Thomas, Len and Fortin, Daniel and Morales, Juan M},
  journal={Ecology},
  volume={93},
  number={11},
  pages={2336--2342},
  year={2012},
  publisher={Wiley Online Library}
}

@article{leos2017,
  title={Analysis of animal accelerometer data using hidden {Markov} models},
  author={Leos-Barajas, Vianey and Photopoulou, Theoni and Langrock, Roland and Patterson, Toby A and Watanabe, Yuuki Y and Murgatroyd, Megan and Papastamatiou, Yannis P},
  journal={Methods in Ecology and Evolution},
  volume={8},
  number={2},
  pages={161--173},
  year={2017},
  publisher={Wiley Online Library}
}

@article{mcclintock2018,
  title={{momentuHMM}: {R} package for generalized hidden {Markov} models of animal movement},
  author={McClintock, Brett T and Michelot, Th{\'e}o},
  journal={Methods in Ecology and Evolution},
  volume={9},
  number={6},
  pages={1518--1530},
  year={2018},
  publisher={Wiley Online Library}
}

@article{mcclintock2020,
  title={Uncovering ecological state dynamics with hidden {Markov} models},
  author={McClintock, Brett T and Langrock, Roland and Gimenez, Olivier and Cam, Emmanuelle and Borchers, David L and Glennie, Richard and Patterson, Toby A},
  journal={Ecology letters},
  volume={23},
  number={12},
  pages={1878--1903},
  year={2020},
  publisher={Wiley Online Library}
}

@article{michelot2016,
  title={{moveHMM}: an {R} package for the statistical modelling of animal movement data using hidden {Markov} models},
  author={Michelot, Theo and Langrock, Roland and Patterson, Toby A},
  journal={Methods in Ecology and Evolution},
  volume={7},
  number={11},
  pages={1308--1315},
  year={2016},
  publisher={Wiley Online Library}
}

@book{zucchini2017,
  title={Hidden {Markov} Models for Time Series: An Introduction Using {R}, {Second} edition},
  author={Zucchini, Walter and MacDonald, Iain L and Langrock, Roland},
  year={2017},
  publisher={CRC Press}
}