You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Description: I encountered an issue while plotting nodes with netplotbrain where specifying a large number of different node colors results in errors. Here’s a summary of the issue and my feature requests:
Current Behavior:
My data is :
roi channel x y z color
0 Left motor area 10 -45 12 56 #fc8d62
1 Left motor area 4 -50 12 47 #fc8d62
2 Left motor area 1 -57 6 40 #fc8d62
3 Left Broca's area 5 -51 30 33 #8da0cb
4 Left Broca's area 3 -56 25 26 #8da0cb
5 Left Broca's area 2 -60 19 18 #8da0cb
6 Left Broca's area 13 -46 47 21 #8da0cb
7 Left Broca's area 8 -52 41 12 #8da0cb
8 Left Broca's area 7 -55 36 4 #8da0cb
9 Left dorsolateral prefrontal cortex 11 -39 31 48 #fc8d62
10 Left dorsolateral prefrontal cortex 12 -30 28 56 #fc8d62
11 Left dorsolateral prefrontal cortex 18 -20 46 47 #fc8d62
12 Left dorsolateral prefrontal cortex 6 -45 32 41 #fc8d62
13 Left dorsolateral prefrontal cortex 17 -31 49 38 #fc8d62
14 Left dorsolateral prefrontal cortex 20 -12 59 40 #fc8d62
15 Right ventrolateral prefrontal cortex 37 34 67 -2 #66c2a5
16 Right ventrolateral prefrontal cortex 48 48 55 0 #66c2a5
17 Left frontal pole 19 -21 62 29 #ffd92f
18 Left frontal pole 16 -32 62 19 #ffd92f
19 Left frontal pole 27 -13 71 18 #ffd92f
20 Left frontal pole 15 -40 59 9 #ffd92f
21 Left frontal pole 22 -22 71 9 #ffd92f
22 Left frontal pole 23 -13 73 -2 #ffd92f
23 Right frontal pole 35 13 73 -2 #b3b3b3
24 Right frontal pole 36 24 72 9 #b3b3b3
25 Right frontal pole 43 43 60 9 #b3b3b3
26 Right frontal pole 30 13 71 19 #b3b3b3
27 Right frontal pole 41 33 64 19 #b3b3b3
28 Right frontal pole 33 22 63 29 #b3b3b3
29 Left ventrolateral prefrontal cortex 9 -47 52 0 #e78ac3
30 Left ventrolateral prefrontal cortex 21 -33 66 -2 #e78ac3
31 Right dorsolateral prefrontal cortex 42 41 50 29 #e5c494
32 Right dorsolateral prefrontal cortex 31 12 59 39 #e5c494
33 Right dorsolateral prefrontal cortex 34 31 49 39 #e5c494
34 Right dorsolateral prefrontal cortex 45 46 33 43 #e5c494
35 Right dorsolateral prefrontal cortex 32 21 47 49 #e5c494
36 Right dorsolateral prefrontal cortex 39 40 31 48 #e5c494
37 Right Broca's area 50 58 36 4 #66c2a5
38 Right Broca's area 49 54 42 13 #66c2a5
39 Right Broca's area 44 49 48 22 #66c2a5
40 Right Broca's area 53 62 20 19 #66c2a5
41 Right Broca's area 51 58 27 26 #66c2a5
42 Right Broca's area 46 53 31 34 #66c2a5
43 Right motor area 52 60 6 42 #a6d854
44 Right motor area 47 52 12 48 #a6d854
45 Right motor area 40 47 12 56 #a6d854
I receive an error when the number of different colors is large.
Traceback (most recent call last):
File "/home/jade/anaconda3/envs/fnirs/lib/python3.9/site-packages/pandas/core/ops/array_ops.py", line 220, in _na_arithmetic_op
result = func(left, right)
TypeError: unsupported operand type(s) for -: 'str' and 'str'
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/home/jade/anaconda3/envs/fnirs/lib/python3.9/site-packages/IPython/core/interactiveshell.py", line 3550, in run_code
exec(code_obj, self.user_global_ns, self.user_ns)
File "<ipython-input-37-ae0da7077c31>", line 1, in <module>
netplotbrain.plot(
File "/home/jade/anaconda3/envs/fnirs/lib/python3.9/site-packages/netplotbrain/plot.py", line 151, in plot
node_color = _get_colorby_colors(nodes, node_colorby, **profile)
File "/home/jade/anaconda3/envs/fnirs/lib/python3.9/site-packages/netplotbrain/utils/coloring.py", line 176, in _get_colorby_colors
cat = (cat - np.nanmin(cat)) / (np.nanmax(cat) - np.nanmin(cat))
File "/home/jade/anaconda3/envs/fnirs/lib/python3.9/site-packages/pandas/core/ops/common.py", line 76, in new_method
return method(self, other)
File "/home/jade/anaconda3/envs/fnirs/lib/python3.9/site-packages/pandas/core/arraylike.py", line 194, in __sub__
return self._arith_method(other, operator.sub)
File "/home/jade/anaconda3/envs/fnirs/lib/python3.9/site-packages/pandas/core/series.py", line 5819, in _arith_method
return base.IndexOpsMixin._arith_method(self, other, op)
File "/home/jade/anaconda3/envs/fnirs/lib/python3.9/site-packages/pandas/core/base.py", line 1381, in _arith_method
result = ops.arithmetic_op(lvalues, rvalues, op)
File "/home/jade/anaconda3/envs/fnirs/lib/python3.9/site-packages/pandas/core/ops/array_ops.py", line 285, in arithmetic_op
res_values = _na_arithmetic_op(left, right, op) # type: ignore[arg-type]
File "/home/jade/anaconda3/envs/fnirs/lib/python3.9/site-packages/pandas/core/ops/array_ops.py", line 229, in _na_arithmetic_op
result = _masked_arith_op(left, right, op)
File "/home/jade/anaconda3/envs/fnirs/lib/python3.9/site-packages/pandas/core/ops/array_ops.py", line 184, in _masked_arith_op
result[mask] = op(xrav[mask], y)
TypeError: unsupported operand type(s) for -: 'str' and 'str'
allows the code to run, but the color legend is not displayed due to the large number of colors.
Feature Request:
Separate Node Color and Node Label Control: I would like to request the ability to separate node color and node label (or name). This would allow one parameter to control the node color and another to control the node label.
Improved Label Arrangement: When the number of labels is large, it would be beneficial to have an option to arrange the labels horizontally or in a more space-efficient manner. If this is already possible using matplotlib, some guidance on how to do so would be appreciated.
Thank you for considering these requests. The ability to customize node color and labels independently would greatly enhance the usability of the plotting functions for complex datasets.
The text was updated successfully, but these errors were encountered:
Description: I encountered an issue while plotting nodes with netplotbrain where specifying a large number of different node colors results in errors. Here’s a summary of the issue and my feature requests:
Current Behavior:
My data is :
When plotting with the following code:
I receive an error when the number of different colors is large.
Changing the code to:
allows the code to run, but the color legend is not displayed due to the large number of colors.
Feature Request:
Separate Node Color and Node Label Control: I would like to request the ability to separate node color and node label (or name). This would allow one parameter to control the node color and another to control the node label.
Improved Label Arrangement: When the number of labels is large, it would be beneficial to have an option to arrange the labels horizontally or in a more space-efficient manner. If this is already possible using matplotlib, some guidance on how to do so would be appreciated.
Thank you for considering these requests. The ability to customize node color and labels independently would greatly enhance the usability of the plotting functions for complex datasets.
The text was updated successfully, but these errors were encountered: