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fsa_rd_tools: fsa/utility.cpp:47: size_t fsa::FindLongestXHeap(std::vector<int>&, long long int): Assertion `index > 0' failed. #52

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xylapple2013 opened this issue Jun 27, 2023 · 0 comments

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2023-06-27 12:21:31 [WARNING] Unrecognized the suffix of ont.list
2023-06-27 12:21:31 [WARNING] No all reads in file are loaded: ont.list
2023-06-27 12:21:31 [INFO] length size = 0
fsa_rd_tools: fsa/utility.cpp:47: size_t fsa::FindLongestXHeap(std::vector&, long long int): Assertion `index > 0' failed.
/gpfs03/home/ylxu/genome_sequencing/Heliothis_assulta/F1/Cleandata/asm_ont/Hass/scripts/cns_pprr.sh: line 16: 4434 Aborted (core dumped) /gpfs03/home/ylxu/software2/NECAT/Linux-amd64/bin/fsa_rd_tools longest --ifname ont.list --ofname /gpfs03/home/ylxu/genome_sequencing/Heliothis_assulta/F1/Cleandata/asm_ont/Hass/1-consensus/raw_reads/filtered_raw_reads.fasta --min_length 3000 --base_size 17200000000 --discard_illegal_read
2023-06-27 12:21:31 [Warning] Failed to run script, 134, /gpfs03/home/ylxu/genome_sequencing/Heliothis_assulta/F1/Cleandata/asm_ont/Hass/scripts/cns_pprr.sh
2023-06-27 12:21:31 [Error] Reached to maximum number of script errors

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