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DESCRIPTION
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Package: spThin
Type: Package
Title: Functions for Spatial Thinning of Species Occurrence Records for Use in
Ecological Models
Version: 1.0.0
Date: 2015-07-12
Authors@R: c(
person(c("Mathew", "E"), "Aiello-Lammens", email = "[email protected]", role = c("aut", "cre")),
person("Jeff", "Hanson", role = c("aut")),
person(c("Robert", "A"), "Boria", role = c("aut")),
person("Aleksandar", "Radosavljevic", role = c("aut")),
person("Bruno", "Vilela", role = c("aut")),
person(c("Robert", "P"), "Anderson", role = c("aut")))
Description: Functions to spatially rarefy and thin species occurrence data.
These procedures can ameliorate sampling bias, and fit better ecological
niche models. Data can be thinned used exact-algorithm solvers ('lp_solve' and
'Gurobi') and a heuristic. To thin data using Gurobi, the gurobi R package will
need to be installed from <http://www.gurobi.com/>.
Imports:
gridExtra,
hexbin,
lpSolveAPI,
Matrix,
raster,
rgeos,
rgdal,
sp,
slam
Depends:
ggplot2,
methods
LinkingTo: Rcpp,
RcppEigen
LazyData: true
License: GPL-3
VignetteBuilder: knitr
Suggests:
knitr,
testthat,
fields
Enhances: gurobi
SystemRequirements: C++11
Collate:
'Heteromys_anomalus_South_America.R'
'RcppExports.R'
'generics.R'
'dependencies.R'
'SpPartial.R'
'SpRarefy.R'
'spThin-internal.R'
'SpThin.R'
'make.grid.R'
'rarefy.R'
'thin.R'