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<!doctype html>
<head>
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<title>Laboratory of Computational Molecular Biology, BNU</title>
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<header>
<h1>Laboratory of Computational Molecular Biology</h1>
<h2>College of Life Sciences, Beijing Normal University</h2>
</header>
<nav>
<ul>
<li><a href="index.html">Home</a></li>
<li><a href="faculty.html">Faculty</a></li>
<li><a href="students.html">Students</a></li>
<li><a href="research.html">Research Areas</a></li>
<li><a href="facilities.html">Facilities</a></li>
<li><a href="publications.html">Publications</a></li>
<li><a href="contact.html">Contact Us</a></li>
</ul>
</nav>
<aside>
<h3>Online Applications</h3>
<ul>
<li><a href="http://cmb.bnu.edu.cn/SPIDer/">SPIDer</a></li>
<li><a href="http://cmb.bnu.edu.cn/pdart/">PDART</a></li>
<li><a href="http://cmb.bnu.edu.cn/BPhyOG/">BPhyOG</a></li>
<li><a href="http://cmb.bnu.edu.cn/BindingR/">BindingR</a></li>
<li><a href="http://cmb.bnu.edu.cn/hrss/">HRSS</a></li>
</ul>
<h3>Links</h3>
<ul>
<li><a href="http://www.ncbi.nlm.nih.gov/">NCBI</a></li>
<li><a href="http://www.ensembl.org/">Ensembl</a></li>
<li><a href="http://www.geneontology.org/">Gene Ontology</a></li>
<li><a href="http://www.sanger.ac.uk/Software/Pfam/">Pfam</a></li>
<li><a href="http://www.ebi.uniprot.org/">UniProt</a></li>
<li><a href="http://www.bnu.edu.cn/">Beijing Normal University</a></li>
<li><a href="http://cls.bnu.edu.cn/">College of Life Sciences, BNU</a></li>
<li><a href="http://ecology.bnu.edu.cn/">Institute of Ecology, BNU</a></li>
</ul>
</aside>
<div id="main">
<h3>Publications</h3>
<ul>
<li>
<p class="click_year"><a href="javascript:void(0)" onclick="display('list_2015_2014')">2015-2014</a></p>
<ul class="paper_list" id="list_2015_2014">
<li>
<span class="author our_author">Zhang Y C, Lin K.</span>(2015).
Phylogeny Inference of Closely Related Bacterial Genomes: Combining the Features of Both Overlapping Genes and Collinear Genomic Regions[J]. <span class="journal_title">Evolutionary Bioinformatics</span> , 2015, 11(Suppl 2): 1.
[<a href="http://www.la-press.com/phylogeny-inference-of-closely-related-bacterial-genomes-combining-the-article-a5275-abstract?article_id=5275">Online Text</a>]
</li>
<li>
<span class="author our_author">Zhang Y C, Zhang Y, Zhu B R, et al.</span>
Genome sequences of two closely related strains of Escherichia coli K-12 GM4792[J]. <span class="journal_title"> Standards in Genomic Sciences </span> , 2015, 10(1): 1-9.
[<a href="http://www.standardsingenomics.com/content/10/1/125">Online Text</a>]
</li>
<li>
<span class="our_author">Ma MY, Che XR, Porceddu A</span>, <span class="author our_author">Niu DK</span> (December 2015).
Evaluation of the mechanisms of intron loss and gain in the social amoebae Dictyostelium. <span class="journal_title"> BMC Evolutionary Biology </span>. 115: 286.
[<a href="http://dx.doi.org/10.1186/s12862-015-0567-y">Online Text</a>]
</li>
<li>
<span class="our_author">Pang E, Cao H, Zhang B</span>, <span class="author our_author">Lin, K</span>. Crop Genome Annotation: A Case Study for the Brassica rapa Genome[M]//<span class="journal_title">The Brassica rapa Genome</span>. Springer Berlin Heidelberg, 2015: 53-64.
[<a href="http://link.springer.com/chapter/10.1007/978-3-662-47901-8_5">Online Text</a>]
</li>
<li>
<span class="our_author">Ma MY, Zhu T, Li XN, Lan XR, Liu HY, Yang YF</span>, <span class="author our_author">Niu DK </span>(May 2015).
Imprecise intron losses are less frequent than precise intron losses but are not rare in plants.<span class="journal_title"> Biology Direct. </span> 10: 24.
[<a href="http://dx.doi.org/10.1186/s13062-015-0056-7">Online Text</a>]s
</li>
<li>
Lin, T., Zhu, G., Zhang, J., Xu, X., Yu, Q., Zheng, Z.,…,<span class="our_author">Zhang, Y.C.</span>, <span class="author our_author">Lin, K.</span>,…, Huang, S. (2014).
Genomic analyses provide insights into the history of tomato breeding. <span class="journal_title">Nature Genetics</span>, 46(11), 1220–1226. doi:10.1038/ng.3117
[<a href="http://dx.doi.org/10.1038/ng.3117">Online PDF</a>]
</li>
<li>
Jiang, L., Li, X.N. and <span class="author">Niu, D.K.</span>,
(2014) Higher frequency of intron loss from the promoter proximally paused genes of <i>Drosophila melanogaster</i>: Evidence consistent with delays in intron splicing as a selective force.
<span class="journal_title">Fly</span> 8:120-125
[<a href="https://www.landesbioscience.com/journals/fly/article/29489/">Online PDF</a>]
</li>
<li>
<span class="author our_author">Lin, K.</span>, Limpens, E., Zhang, Z.H, Ivanov, S., Saunders, DGO., Mu, D.S.,
<span class="our_author">Pang, E.L.</span>, <span class="our_author">Cao, H.F.</span>, <span class="our_author">Cha, H.H.</span>, Lin, T., Zhou, Q., Shang, Y., Li, Y.,
Sharma, T., Velzen, R.V., Ruijter, N., Aanen, D.K., Win, J., Kamoun, S., Bisseling, T., Geurts, R., Huang, S.W.
(2014) Single Nucleus Genome Sequencing Reveals High Similarity among Nuclei of an Endomycorrhizal Fungus.
<span class="journal_title">PLoS Genet</span> 10(1): e1004078. doi:10.1371/journal.pgen.1004078
[<a href="http://dx.plos.org/10.1371/journal.pgen.1004078">Online PDF</a>]
</li>
</ul>
</li>
<li>
<p class="click_year"><a href="javascript:void(0)" onclick="display('list_2013_2012')">2013-2012</a></p>
<ul class="paper_list" title="previous_list" id="list_2013_2012">
<li>
Yang YF, Zhu T and <span class="author">Niu DK</span> (2013).
Association of intron loss with high mutation rate in Arabidopsis: Implications for genome size evolution.
<span class="journal_title">Genome Biology and Evolution</span>, doi: 10.1093/gbe/evt043.
[<a href="http://gbe.oxfordjournals.org/content/5/4/723">Online PDF</a>]
</li>
<li>
Zhu T and <span class="author">Niu DK</span> (2013).
Mechanisms of intron loss and gain in the fission yeast Schizosaccharomyces.
<span class="journal_title">PLOS ONE</span>, doi:10.1371/journal.pone.0061683.
[<a href="http://dx.doi.org/10.1371/journal.pone.0061683">Online PDF</a>]
</li>
<li>
Zhu T and <span class="author">Niu DK</span> (2013).
Frequency of intron loss correlates with processed pseudogene abundance:
a novel strategy to test the reverse transcriptase model of intron loss.
<span class="journal_title">BMC Biology</span>, doi:10.1186/1741-7007-11-23.
[<a href="http://www.biomedcentral.com/1741-7007/11/23">Online PDF</a>]
</li>
<li>
<span class="author">Niu DK</span> and Jiang L (2013). Can ENCODE tell us how much junk DNA we carry in our genome?
<span class="journal_title">Biochemical and Biophysical Research Communications</span>, doi:10.1016/j.bbrc.2012.12.074.
[<a href="http://www.sciencedirect.com/science/article/pii/S0006291X12024229">Online PDF</a>]
</li>
<li>
Guo, S.G., Zhang, J.G., Sun, H.H.,..., Tan, T., Pang E.L., <span class="author">Lin K.</span>,..., Fei, Z.J. and Xu, Y. (2012)
The draft genome of watermelon (Citrullus lanatus) and resequencing of 20 diverse accessions.
<span class="journal_title">Nature Genetics</span>, doi:10.1038/ng.2470.
[<a href="http://www.nature.com/ng/journal/vaop/ncurrent/full/ng.2470.html">Online PDF</a>]
</li>
<li>
Zhang, Y. and <span class="author">Lin, K.</span> (2012)
A phylogenomic analysis of Escherichia coli / Shigella group: implications of genomic
features associated with pathogenicity and ecological adaptation.
<span class="journal_title">BMC Evolutionary Biology</span>, doi:10.1186/1471-2148-12-174.
[<a href="http://www.biomedcentral.com/1471-2148/12/174">Online PDF</a>]
</li>
<li>
Pang, E.L., Tan, T. and <span class="author">Lin, K.</span> (2012)
Promiscuous domains: faci litating stability of the yeast protein-protein interaction network.
<span class="journal_title">Mol. BioSyst.</span>, doi:10.1039/C1MB05364G.
[<a href="http://pubs.rsc.org/en/Content/ArticleLanding/2012/MB/c1mb05364g">Online PDF</a>]
</li>
</ul>
</li>
<li>
<p class="click_year"><a href="javascript:void(0)" onclick="display('list_2011_2010')">2011-2010</a></p>
<ul class="paper_list" title="previous_list" id="list_2011_2010">
<li>
<span class="author">Niu, D.K.</span> and Yang, Y.F. (2011).
Why eukaryotic cells use introns to enhance gene expression: Splicing reduces transcription-associated
mutagenesis by inhibiting topoisomerase I cutting activity.
<span class="journal_title">Biology Direct</span>, 6: 24 doi:10.1186/1745-6150-6-24.
[<a href="http://www.biology-direct.com/content/6/1/24">Online PDF</a>]
</li>
<li>
Li, Z., Zhang, Z.H., Yan, P.C., Huang, S.W., Fei, Z.j., and <span class="author">Lin, K.</span> (2011)
RNA-Seq improves annotation of protein-coding genes in the cucumber genome.
<span class="journal_title">BMC Genomics</span>, doi: 10.1186/1471-2164-12-540
[<a href="http://www.biomedcentral.com/1471-2164/12/540">Online PDF</a>]
</li>
<li>
Hou, W.R., Li, M. and <span class="author">Niu, D.K.</span> (2011).
Counting citations in texts rather than reference lists to improve the accuracy of assessing scientific contribution.
<span class="journal_title">BioEssays</span> 33: 724-727.
[<a href="http://onlinelibrary.wiley.com/doi/10.1002/bies.201100067/full">Online PDF</a>]
</li>
<li>
Pang, E.L. and <span class="author">Lin, K.</span> (2010)
Yeast protein–protein interaction binding sites: prediction from the motif–motif, motif–domain and domain–domain levels.
<span class="journal_title">Molecular BioSystems</span>, doi: 10.1039/C0MB00038H.
[<a href="http://pubs.rsc.org/en/Content/ArticlePDF/2010/MB/C0MB00038H/2010-08-17?page=Search">Online PDF</a>]
</li>
<li>
<span class="author">Niu DK</span> and Cao JL (2010).
Nucleosome deposition and DNA methylation may participate in the recognition of premature termination codon in non-sense-mediated mRNA decay.
<span class="journal_title">FEBS Letters</span>, 584: 3509-3512.
[<a href="http://cmb.bnu.edu.cn/teachers/niudk_files/publications/FBBS_L2010.pdf">Online PDF</a>]
</li>
<li>
Zhang LY, Yang YF and <span class="author">Niu DK</span> (2010).
Evaluation of models of the mechanisms underlying intron loss and gain in Aspergillus fungi.
<span class="journal_title">Journal of Molecular Evolution</span>, doi:10.1007/s00239-010-9391-6.
[<a href="http://www.springerlink.com/content/a100726k21183642/">Online PDF</a>]
</li>
</ul>
</li>
<li>
<p class="click_year"><a href="javascript:void(0)" onclick="display('list_2009_2008')">2009-2008</a></p>
<ul class="paper_list" title="previous_list" id="list_2009_2008">
<li>
Fu, C., Li, J. and <span class="author">Wang, E.</span> (2009)
Signaling network analysis of ubiquitin-mediated proteins suggests correlations between the 26S proteasome and tumor progression.
<span class="journal_title">Molecular BioSystems</span>, 5: 1809-1816.
[<a href="http://www.rsc.org/ej/MB/2009/b905382d.pdf">Online PDF</a>]
</li>
<li>
Huang, S.W., Li, R.Q., Zhang, Z.H., Li, L., Gu, X.F., Fan, W., Lucas, W.J., Wang, X.W., Xie, B.Y., Ni, P.X., Ren, Y.Y., Zhu, H.M.,
Li, J., <span class="author">Lin, K.</span>, Jin, W.W., Fei, Z.J., Li, G.C., Stabu, J., Kilian, A., Vossen, E.A., Wu, Y., Guo, J., He, J., Jia, Z.Q., Ren, Y.,
Tian, G., Lu, Y., Ruan, J., Qian, W.B., Wang, M.W., Huang, Q.F., Li, B., Xuan, Z.L., Cao, J.J., Asan, Wu, Z.G., Zhang, J.B.,
Cai, Q.L., Bai, Y.Q., Zhao, B.W., Han, Y.H., Li, Y., Li, X.F., Wang, S.H., Shi, Q.X., Liu, S.Q., Cho, W.K., Kim, J.Y., Xu, Y.,
Uszynska, K.H., Miao, H., Cheng, Z.C., Zhang, S.P., Wu, J., Yang, Y.H., Kang, H.X., Li, M., Liang, H.Q., Ren, X.L., Shi, Z.B.,
Wen, M., Jian, M., Yang, H.L., Zhang, G.J., Yang, Z.T., Chen, R., Liu, S.F., Li, J.W., Ma, L.J., Liu, H., Zhou, Y., Zhao, J.,
Fang, X.D., Li, G.Q., Fang, L., Li, Y.R., Liu, D.Y., Zheng, H.K., Zhang, Y., Qin, N., Li, Z., Yang, G.H., Yang, S., Bolund, L.,
Kristiansen, K., Zheng, H.C., Li, S.C., Zhang, X.Q., Yang, H.M., Wang, J., Sun, R.F., Zhang, B.X., Jiang, S.Z., Wang, J.,
Du, Y.C. and Li, S.G. (2009)
The genome of the cucumber, Cucumis sativus L.
<span class="journal_title">Nature Genetics</span>, 41:1275-1281.
[<a href="http://www.nature.com/ng/journal/v41/n12/pdf/ng.475.pdf">Online PDF</a>]
</li>
<li>
Wu, X.M., Guo, J., Zhang, D.Y. and <span class="author">Lin, K.</span> (2009)
The properties of hub proteins in a yeast-aggregated cell cycle network and its phase sub-networks.
<span class="journal_title">Proteomics</span>, 9:4812-4824.
[<a href="http://www3.interscience.wiley.com/cgi-bin/fulltext/122593415/PDFSTART">Online PDF</a>]
</li>
<li>
Fu, C. and <span class="author">Lin, K.</span> (2009)
Computational Analysis of miRNA and Target mRNA Interactions: Combined Effects of The Quantity and Quality of Their Binding Sites.
<span class="journal_title">Progress in Biochemistry and Biophysics</span>, 36(5):608-615.
[<a href="http://cmb.bnu.edu.cn/files/fulltext_fuc.pdf">Online PDF</a>]
</li>
<li>
Li, N., Lv, J. and <span class="author">Niu, D.K.</span> (2009).
Low contents of carbon and nitrogen in highly abundant proteins: Evidence of selection for the economy of atomic composition.
<span class="journal_title">Journal of Molecular Evolution</span>, 68:248-255.
[<a href="http://www.springerlink.com/content/wj610064mr0232g8/fulltext.pdf">Online PDF</a>]
</li>
<li>
<span class="author">Lin, K.</span>, Zhang, D.Y. and He, F. (2009)
Demographic trade-offs in a neutral model explains death rate-abundance rank relationship.
<span class="journal_title">Ecology</span>, 90(1):31-38.
[<a href="http://www.esajournals.org/doi/pdf/10.1890/07-2079.1">Online PDF</a>]
</li>
<li>
<span class="author">Niu, D.K.</span> (2008)
Exon definition as a potential negative force against intron losses in evolution.
<span class="journal_title">Biology Direct</span>, 3:46.
[<a href="http://www.biology-direct.com/content/pdf/1745-6150-3-46.pdf">Online PDF</a>]
</li>
<li>
Lv, J., Li, N. and <span class="author">Niu, D.K.</span> (2008)
Association between the availability of environmental resources and the atomic composition of organismal proteomes:
Evidence from Prochlorococcus strains living at different depths.
<span class="journal_title">Biochemical and Biophysical Research Communications</span>, 375:241-246.
[<a href="http://www.sciencedirect.com/science/article/pii/S0006291X0801526X">Online PDF</a>]
</li>
<li>
Huang, Y.F. and <span class="author">Niu, D.K.</span> (2008)
Evidence against the energetic cost hypothesis for the short introns in highly expressed genes.
<span class="journal_title">BMC Evolutionary Biology</span>, 8:154.
[<a href="http://www.biomedcentral.com/content/pdf/1471-2148-8-154.pdf">Online PDF</a>]
</li>
<li>
Zhou, H.J. and <span class="author">Lin, K.</span> (2008)
Excess of microRNAs in large and very 5' biased introns.
<span class="journal_title">Biochemical and Biophysical Research Communications</span>, 368:709-715.
[<a href="http://www.sciencedirect.com/science/article/pii/S0006291X08002027">Online PDF</a>]
</li>
<li>
Guo, J., Wu, X.M., Zhang, D.Y. and <span class="author">Lin, K.</span> (2008)
Genome-wide inference of protein interaction sites: lessons from the yeast high-quality negative protein–protein interaction dataset.
<span class="journal_title">Nucleic Acids Research</span>, 36(6):2002-2011.
[<a href="http://nar.oxfordjournals.org/cgi/reprint/36/6/2002">Online PDF</a>]
</li>
</ul>
</li>
<li>
<p class="click_year"><a href="javascript:void(0)" onclick="display('list_2007_2006')">2007-2006</a></p>
<ul class="paper_list" title="previous_list" id="list_2007_2006">
<li>
Luo, Y.Q., Fu, C., Zhang, D.Y. and <span class="author">Lin, K.</span> (2007)
BPhyOG: An interactive server for genome-wide inference of bacterial phylogenies based on overlapping genes.
<span class="journal_title">BMC Bioinformatics</span>, 8:266.
[<a href="http://www.biomedcentral.com/content/pdf/1471-2105-8-266.pdf">Online PDF</a>]
</li>
<li>
Li, S.W., Feng, L. and <span class="author">Niu, D.K.</span> (2007)
Selection for the miniaturization of highly expressed genes.
<span class="journal_title">Biochemical and Biophysical Research Communications</span>, 360:586-592.
[<a href="http://www.sciencedirect.com/science/article/pii/S0006291X07013307">Online PDF</a>]
</li>
<li>
Wang, H.F., Hou, W.R. and <span class="author">Niu, D.K.</span> (2007)
Strand compositional asymmetries in vertebrate large genes.
<span class="journal_title">Molecular Biology Reports</span>, 35:163-169.
[<a href="http://www.springerlink.com/content/7636470m47226106/fulltext.pdf">Online PDF</a>]
</li>
<li>
<span class="author">Niu, D.K.</span> (2007)
Protecting exons from deleterious R-loops: a potential advantage of having introns.
<span class="journal_title">Biology Direct</span>, 2:11.
[<a href="http://www.springerlink.com/content/7636470m47226106/fulltext.pdf">Online PDF</a>]
</li>
<li>
Feng, L. and <span class="author">Niu, D.K.</span> (2007)
Relationship between mRNA stability and length: An old question with a new twist.
<span class="journal_title">Biochemical Genetics</span>, 45:131-137.
[<a href="http://www.springerlink.com/content/cjt172p281313g24/fulltext.pdf">Online PDF</a>]
</li>
<li>
Wang, H.F., Feng, L. and <span class="author">Niu, D.K.</span> (2007)
Relationship between mRNA stability and intron presence.
<span class="journal_title">Biochemical and Biophysical Research Communications</span>, 354:203-208.
[<a href="http://www.sciencedirect.com/science/article/pii/S0006291X06028592s">Online PDF</a>]
</li>
<li>
Wu, X.M., Zhu, L., Guo, J., Fu, C., Zhou, H.J., Dong, D., Li, Z.B., Zhang, D.Y. and <span class="author">Lin, K.</span> (2006)
SPIDer: Saccharomyces protein-protein interaction database.
<span class="journal_title">BMC Bioinformatics</span>, 7:S16.
[<a href="http://www.biomedcentral.com/content/pdf/1471-2105-7-S5-S16.pdf">Online PDF</a>]
</li>
<li>
Luo, Y.Q., Fu, C., Zhang, D.Y. and <span class="author">Lin, K.</span> (2006)
Overlapping genes as rare genomic markers: the γ-Proteobacteria phylogeny as a case study.
<span class="journal_title">Trends in Genetics</span>, 22(11):593-596.
[<a href="http://www.sciencedirect.com/science/article/pii/S0168952506002939">Online PDF</a>]
</li>
<li>
<span class="author">Lin, K.</span>, Zhu, L. and Zhang, D.Y. (2006)
An initial strategy for comparing proteins at the domain architecture level.
<span class="journal_title">Bioinformatics</span>, 22(17):2081-2086.
[<a href="http://bioinformatics.oxfordjournals.org/cgi/reprint/22/17/2081">Online PDF</a>]
</li>
<li>
Wu, X.M., Zhu, L., Guo, J., Zhang,D.Y. and <span class="author">Lin, K.</span> (2006)
Prediction of yeast protein–protein interaction network: insights from the Gene Ontology and annotations.
<span class="journal_title">Nucleic Acids Research</span>, 34(7):2137-2150.
[<a href="http://nar.oxfordjournals.org/cgi/reprint/34/7/2137">Online PDF</a>]
</li>
<li>
He, Y.W., Xu, M., <span class="author">Lin, K.</span>, Ng, Y.J., Wen, C.M., Wang, L.H., Liu, Z.D., Zhang, H.B., Dong, Y.H., Dow, J.M. and Zhang, L.H.
(2006) Genome scale analysis of diffusible signal factor regulon in Xanthomonas campestris pv. campestris:
identification of novel cell-cell communication-dependent genes and functions.
<span class="journal_title">Molecular Microbiology</span>, 59(2):610-22.
[<a href="http://www3.interscience.wiley.com/cgi-bin/fulltext/118629810/PDFSTART">Online PDF</a>]
</li>
<li>
Hou, W.R., Wang, H.F. and <span class="author">Niu, D.K.</span> (2006)
Replication-associated strand asymmetries in vertebrate genomes and implications for replicon size, DNA replication origin and termination.
<span class="journal_title">Biochemical and Biophysical Research Communications</span>, 344:1258-1262.
[<a href="http://www.sciencedirect.com/science/article/pii/S0006291X06009016">Online PDF</a>]
</li>
</ul>
</li>
<li>
<p class="click_year"><a href="javascript:void(0)" onclick="display('list_2005')">2005 and before</a></p>
<ul class="paper_list" title="previous_list" id="list_2005">
<li>
Sun, Q.L., Zhou, H.J., <span class="author">Lin, K.</span> (2005)
The Evolutionary Relationship of the Domain Architectures in the RhoGEF-containing Proteins.
<span class="journal_title">Genomics, Proteomics & Bioinformatics</span>, 3:94-106.
</li>
<li>
<span class="author">Lin, K.</span> and Zhang, D.Y. (2005)
The excess of 5' introns in eukaryotic genomes.
<span class="journal_title">Nucleic Acids Research</span>, 33:6522-6527.
[<a href="http://nar.oxfordjournals.org/cgi/reprint/33/20/6522">Online PDF</a>]
</li>
<li>
<span class="author">Niu, D.K.</span> (2005)
Low-level illegitimate transcription of genes may be to silence the genes.
<span class="journal_title">Biochemical and Biophysical Research Communications</span>, 337:413-414.
[<a href="http://www.sciencedirect.com/science/article/pii/S0006291X05019352">Online PDF</a>]
</li>
<li>
<span class="author">Niu, D.K.</span>, Hou, W.R. and Li, S.W. (2005)
mRNA-mediated intron losses: Evidence from extraordinarily large exons.
<span class="journal_title">Molecular Biology and Evolution</span>, 22:1475-1481.
[<a href="http://mbe.oxfordjournals.org/cgi/reprint/22/6/1475">Online PDF</a>]
</li>
<li>
Peng, X., Karuturi, R.K.M., Miller, L.D., <span class="author">Lin, K.</span>, Jia, Y.H.,
Kondu, P., Wang, L., Wong, L.S., Liu, E.T., Balasubramanian, M.K. and Liu, J.H. (2005)
Identification of Cell Cycle-regulated Genes in Fission Yeast.
<span class="journal_title">Molecular Biology Cell</span>, 16:1026-1042.
[<a href="http://www.molbiolcell.org/cgi/reprint/16/3/1026">Online PDF</a>]
</li>
<li>
Zhang, D.Y., <span class="author">Lin, K.</span> and Hanski, I. (2004)
Coexistence of cryptic species.
<span class="journal_title">Ecology Letters</span>, 7:165-169.
[<a href="http://www3.interscience.wiley.com/cgi-bin/fulltext/118811171/PDFSTART">Online PDF</a>]
</li>
<li>
Song, L., <span class="author">Niu, D.K.</span>, Lei, L., Ou, D., Gevrey, M., Liu, Y., Hou, G. and Lek, S. (2004)
Predictive model of algal blooms in Dianchi Lake using artificial neural networks.
<span class="journal_title">The Japanese Journal of Phycology</span>, 52:S41-S47.
</li>
<li>
Niu, D.K., <span class="author">Lin, K.</span> and Zhang, D.Y. (2003)
Strand compositional asymmetries of nuclear DNA in eukaryotes.
<span class="journal_title">Journal of Molecular Evolution</span>, 57:325-334.
[<a href="http://www.springerlink.com/content/y31a2hdllufl1kmp/fulltext.pdf">Online PDF</a>]
</li>
</ul>
</li>
</ul>
</div>
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