Allow REF/ALT to be case insensitive

See #128
ACEnglish · Jun 14, 2022 · d449b24 · d449b24
1 parent 2d6e782
commit d449b24
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/truvari/comparisons.py b/truvari/comparisons.py
@@ -278,6 +278,8 @@ def seqsim(allele1, allele2, use_lev=False):
     :return: sequence similarity
     :rtype: float
     """
+    allele1 = allele1.upper()
+    allele2 = allele2.upper()
     if use_lev:
         return Levenshtein.ratio(allele1, allele2)
     scr = edlib.align(allele1, allele2)