README

What is this repository for?

• This repository holds the scripts necessary to analyze arrayed colonies of the KEIO, RNAP1, and RNAP2 mutant libraries from the Carol Gross Lab.

• The article referencing this code is available on Pubmed Central, PMC4927156

• other published data analyses that have utilized this code to analyze colony size: PMID| 27238023, ...

• This code is a modification of, and relies heavily on, the EMAP Toolbox from Sean Collins, PMC1779568 See also https://sourceforge.net/projects/emap-toolbox/files/ Files from the original EMAP Toolbox are included within the distribution and authorship of particular .m files is available by accessing the help comments on the file.

*TO DO: Write detailed summary of set up and execution

How do I get set up?

• Summary of set up
• Configuration
• Dependencies MATLAB 2010a or later
• Database configuration No database configurations
• How to run tests
• Deployment instructions

Contribution guidelines

• Writing tests
• Code review
• Other guidelines

Who do I talk to?

• Anthony Shiver ([email protected])
• Other community or team contact