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Update benchmark.sh
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Corrected download from reference genomes -- doubled wget command
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@celiosantosjr
celiosantosjr authored Oct 13, 2020
1 parent 57c15db commit 4d3b66e
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2 changes: 1 addition & 1 deletion benchmark.sh
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Expand Up @@ -26,7 +26,7 @@ out40M="$BENCHMARK_DIR/MACREL/metagenomes/80M"

# To download genomes
cd $BENCHMARK_DIR/refseq/
wget wget 'http://progenomes1.embl.de/data/repGenomes/representatives.contigs.fasta.gz' --output-document 'representatives.contigs.fasta.gz'
wget 'http://progenomes1.embl.de/data/repGenomes/representatives.contigs.fasta.gz' --output-document 'representatives.contigs.fasta.gz'

cd $BENCHMARK_DIR/ab/
wget https://zenodo.org/api/files/0f81e436-b108-435c-8339-9fbc9c4daae8/SAMEA2466916.abund
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