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workflow-gnps-fast #30450

workflow-gnps-fast

workflow-gnps-fast #30450

name: workflow-gnps-fast
on:
push:
branches:
- master
schedule:
- cron: '5 * * * *'
jobs:
workflow-test:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v1
with:
submodules: recursive
- name: Set up Python 3.7
uses: actions/setup-python@v1
with:
python-version: 3.7
- name: Install dependencies
run: |
python -m pip install --upgrade pip
pip install xmltodict
pip install requests
pip install pandas
- name: Run Tests
run: |
python workflow_integration/submit_test_job_batch.py --credential_username ${{ secrets.CCMS_TESTUSER_USERNAME }} \
--credential_password ${{ secrets.CCMS_TESTUSER_PASSWORD }} \
--credential_server gnps.ucsd.edu \
--workflow_task_file CCMSDeployments/fast_test_workflow/test-integration-workflow/test_tasks.tsv