Code

Forecasting Interface#241

Code

Merged

damonbayer merged 55 commits intomainCDCgov/PyRenew:mainfrom dmb_forecastCDCgov/PyRenew:dmb_forecastCopy head branch name to clipboardJul 12, 2024

+215-111

Commits

Commits on Jul 1, 2024

• add arviz plot for posterior predictive

  sbidari

  committed
  f58f33c

  Copy full SHA for f58f33c

Commits on Jul 2, 2024

• broken simplerandomwalk

  damonbayer

  committed
  da8db93

  Copy full SHA for da8db93

• slight simplification

  damonbayer

  committed
  3c10b3e

  Copy full SHA for 3c10b3e

Commits on Jul 3, 2024

• downgrade jax and jaxlib

  damonbayer

  committed
  797b1d1

  Copy full SHA for 797b1d1

• fix scan in simplerandomwalkprocess

  damonbayer

  committed
  20fb2a4

  Copy full SHA for 20fb2a4

• add ppc_plot to hosp_model

  sbidari

  committed
  df7ac7b

  Copy full SHA for df7ac7b

• test prior/posterior_predictive plots

  sbidari

  committed
  c3ec082

  Copy full SHA for c3ec082

• Merge branch 'main' into demonstrate-use-of-predictive-distributions-in-tutorials-using-arviz-1

  damonbayer

  committed
  3cb7755

  Copy full SHA for 3cb7755

• Damon check in

  damonbayer

  committed
  f13c04d

  Copy full SHA for f13c04d

Commits on Jul 5, 2024

• add plot_ppc, plot_lm

  sbidari

  committed
  c7a596a

  Copy full SHA for c7a596a

Commits on Jul 8, 2024

• fix tests

  damonbayer

  committed
  5fc2704

  Copy full SHA for 5fc2704

• formatting

  damonbayer

  committed
  4f0e74f

  Copy full SHA for 4f0e74f

• more formatting

  damonbayer

  committed
  21dd93d

  Copy full SHA for 21dd93d

• fix plot_lm output issue

  sbidari

  committed
  76932df

  Copy full SHA for 76932df

• suggestion from code review

  Show description for e4525ed
  

  sbidari

  and

  damonbayer

  authored
  e4525ed

  Copy full SHA for e4525ed

• Update example_with_datasets.qmd

  damonbayer

  committed
  320cfbe

  Copy full SHA for 320cfbe

• change plot_lm kwargs

  sbidari

  committed
  3b2a3a0

  Copy full SHA for 3b2a3a0

• add details on plot_ppc, fig labels and titles

  sbidari

  committed
  ce58119

  Copy full SHA for ce58119

• resolve merge conflict

  sbidari

  committed
  d691a63

  Copy full SHA for d691a63

• add figure descriptions

  sbidari

  committed
  7954f11

  Copy full SHA for 7954f11

• code review suggestions

  Show description for 05583a0
  

  sbidari

  and

  damonbayer

  authored
  05583a0

  Copy full SHA for 05583a0

• remove link from code

  sbidari

  committed
  034a624

  Copy full SHA for 034a624

• formatting

  damonbayer

  committed
  47fbf8d

  Copy full SHA for 47fbf8d

• Merge branch 'main' into dmb_forecast

  damonbayer

  committed
  4b5a1bc

  Copy full SHA for 4b5a1bc

• simplify models

  damonbayer

  committed
  c744dee

  Copy full SHA for c744dee

• demonstrate forecasting

  damonbayer

  committed
  12bb942

  Copy full SHA for 12bb942

Commits on Jul 10, 2024

• rename hospital_admissions_model

  damonbayer

  committed
  cf6ff45

  Copy full SHA for cf6ff45

• Merge branch 'main' into dmb_forecast

  damonbayer

  committed
  50dd053

  Copy full SHA for 50dd053

• fix bad merges

  damonbayer

  committed
  19ad4c5

  Copy full SHA for 19ad4c5

• fix hospital_admissions_model.qmd

  damonbayer

  committed
  21f8e77

  Copy full SHA for 21f8e77

• fix most tests

  damonbayer

  committed
  0c4c906

  Copy full SHA for 0c4c906

• fix remaining tests

  damonbayer

  committed
  4644208

  Copy full SHA for 4644208

• rename test variable

  damonbayer

  committed
  b8cb7e8

  Copy full SHA for b8cb7e8

• adjust padding handling

  damonbayer

  committed
  9817561

  Copy full SHA for 9817561

• rename internal variables

  damonbayer

  committed
  9c48df9

  Copy full SHA for 9c48df9

• Merge branch 'main' into dmb_forecast

  damonbayer

  committed
  e430d67

  Copy full SHA for e430d67

• formatting

  damonbayer

  committed
  7b392d3

  Copy full SHA for 7b392d3

• Merge branch 'main' into dmb_forecast

  damonbayer

  committed
  6d543f7

  Copy full SHA for 6d543f7

• correcting merge errors

  damonbayer

  committed
  30a9a31

  Copy full SHA for 30a9a31

• remove print debug statements and unused variables

  damonbayer

  committed
  4cf685a

  Copy full SHA for 4cf685a

• fix test

  damonbayer

  committed
  45d9950

  Copy full SHA for 45d9950

• rename for clarity

  damonbayer

  committed
  b3bff64

  Copy full SHA for b3bff64

Commits on Jul 11, 2024

• cleanup variable names

  damonbayer

  committed
  f710e8d

  Copy full SHA for f710e8d

• fix figure

  damonbayer

  committed
  5dff94b

  Copy full SHA for 5dff94b

• delete example_with_datasets

  damonbayer

  committed
  b0df76e

  Copy full SHA for b0df76e

• Merge branch 'main' into dmb_forecast

  damonbayer

  committed
  188cb0f

  Copy full SHA for 188cb0f

• remove unused code

  damonbayer

  committed
  c943309

  Copy full SHA for c943309

• rename init in test_random_walk

  damonbayer

  committed
  bddc731

  Copy full SHA for bddc731

• clarify forecasting

  damonbayer

  committed
  a84ca20

  Copy full SHA for a84ca20

• update numpyro and jax

  damonbayer

  committed
  85c62c1

  Copy full SHA for 85c62c1

• update numpyro and jax

  damonbayer

  committed
  b360093

  Copy full SHA for b360093

• enforce minimum version of numpyro and jax

  damonbayer

  committed
  a7c4673

  Copy full SHA for a7c4673

• try to enforce numpyro version again

  damonbayer

  committed
  f6b34ab

  Copy full SHA for f6b34ab

• add test_forecast

  damonbayer

  committed
  3342f24

  Copy full SHA for 3342f24

Commits on Jul 12, 2024

• Update docs/source/tutorials/hospital_admissions_model.qmd

  Show description for 45879b1
  

  damonbayer

  and

  dylanhmorris

  authored
  45879b1

  Copy full SHA for 45879b1