remove superfluous check for column, fails in rpy2.7.7

CGATOxford · Feb 8, 2016 · 8546620 · 8546620
1 parent ecd1885
commit 8546620
Showing 1 changed file with 0 additions and 1 deletion.
diff --git a/CGAT/Expression.py b/CGAT/Expression.py
@@ -2963,7 +2963,6 @@ def runDESeq(outfile,
 
         # plot heatmap of differentially expressed genes
         # plot gene heatmap for all genes - order by average expression
-        padj_column = list(res.colnames).index('padj')
         select = R('''select = res['padj'] < %f''' % fdr)
 
         if R('''sum(select)''')[0] > 0: