fix: missing file

src/utils/io.rs

@@ -0,0 +1,55 @@
+use crate::utils::parquet_utils;
+use anyhow::Result;
+use arrow2::{
+    array::Array,
+    chunk::Chunk,
+    datatypes::{Field, Schema},
+};
+use libradicl::rad_types;
+use path_tools::WithAdditionalExtension;
+use std::fs::File;
+use std::io::Write;
+use std::path::Path;
+
+pub(crate) fn write_results(
+    output: &Path,
+    hdr: &rad_types::RadHeader,
+    e_counts: &[f64],
+    eff_lengths: &[f64],
+) -> anyhow::Result<()> {
+    let mut ofile = File::create(output)?;
+
+    ofile.write_all("target_name\teelen\tecount\n".to_string().as_bytes())?;
+
+    for (i, name) in hdr.ref_names.iter().enumerate() {
+        let l = format!("{}\t{:.3}\t{:.3}\n", name, eff_lengths[i], e_counts[i]);
+        ofile.write_all(l.as_bytes())?;
+    }
+
+    Ok(())
+}
+pub(crate) fn write_fld_file(
+    output_path: &Path,
+    fields: Vec<Field>,
+    chunk: Chunk<Box<dyn Array>>,
+) -> Result<()> {
+    let output_path = output_path
+        .clone()
+        .to_path_buf()
+        .with_additional_extension(".fld.pq");
+    let schema = Schema::from(fields);
+    parquet_utils::write_chunk_to_file(output_path.to_str().unwrap(), schema, chunk)
+}
+
+pub(crate) fn write_infrep_file(
+    output_path: &Path,
+    fields: Vec<Field>,
+    chunk: Chunk<Box<dyn Array>>,
+) -> Result<()> {
+    let output_path = output_path
+        .clone()
+        .to_path_buf()
+        .with_additional_extension(".infreps.pq");
+    let schema = Schema::from(fields);
+    parquet_utils::write_chunk_to_file(output_path.to_str().unwrap(), schema, chunk)
+}