TST: Switch to pytest to get more info on test issues #404
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| # This workflow will install Python dependencies, run tests and lint with a | |
| # variety of Python versions. For more information see: | |
| # https://help.github.com/actions/language-and-framework-guides/ | |
| # using-python-with-github-actions | |
| name: Pytest with Flake8 | |
| on: | |
| pull_request: | |
| push: | |
| schedule: | |
| - cron: "0 3 * * 1" # Runs 03:00 UT on Mondays | |
| jobs: | |
| build: | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ["ubuntu-latest", "windows-latest"] | |
| python-version: ["3.9", "3.10", "3.11", "3.12"] | |
| numpy_ver: ["latest"] | |
| include: | |
| # Support different GA Mac environments | |
| - python-version: "3.9" | |
| os: "macos-13" | |
| numpy_ver: "latest" | |
| - python-version: "3.12" | |
| os: "macos-13" | |
| numpy_ver: "latest" | |
| - python-version: "3.9" | |
| os: "macos-latest" | |
| numpy_ver: "latest" | |
| - python-version: "3.12" | |
| os: "macos-latest" | |
| numpy_ver: "latest" | |
| # NEP29 compliance settings | |
| - python-version: "3.10" | |
| numpy_ver: "1.25" | |
| os: "ubuntu-latest" | |
| test_config: "NEP29" | |
| name: Python ${{ matrix.python-version }} on ${{ matrix.os }} with numpy ${{ matrix.numpy_ver }} | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install Windows-specific dependencies for non-pip install | |
| if: ${{ matrix.os == 'windows-latest' }} | |
| run: | | |
| choco install ninja mingw | |
| choco install rtools --no-progress | |
| echo "c:\rtools40\ucrt64\bin;" >> $env:GITHUB_PATH | |
| gfortran --version | |
| pip install flake8 meson-python pytest pytest-cov pytest-xdist scipy | |
| pip install "numpy>=1.19.5" | |
| - name: Install standard dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -r test_requirements.txt | |
| pip install -r requirements.txt | |
| - name: Install NEP29 dependencies | |
| if: ${{ matrix.numpy_ver != 'latest'}} | |
| run: | | |
| pip install --no-binary :numpy: numpy==${{ matrix.numpy_ver }} | |
| - name: Set up pysat | |
| run: | | |
| mkdir pysatData | |
| python -c "import pysat; pysat.params['data_dirs'] = 'pysatData'" | |
| - name: Test PEP8 compliance | |
| run: flake8 . --count --select=D,E,F,H,W --show-source --statistics | |
| - name: Evaluate complexity | |
| run: flake8 . --count --exit-zero --max-complexity=10 --statistics | |
| - name: Install on Linux | |
| if: ${{ matrix.os == 'ubuntu-latest' }} | |
| run: | | |
| pip install --upgrade-strategy only-if-needed . | |
| - name: Install on MacOS-13 | |
| if: ${{ matrix.os == 'macos-13' }} | |
| run: | | |
| brew reinstall gcc@14 | |
| CC=/usr/local/bin/gcc-14 pip install --upgrade-strategy only-if-needed . | |
| - name: Install on MacOS-Latest | |
| if: ${{ matrix.os == 'macos-latest' }} | |
| run: | | |
| brew reinstall gcc@14 | |
| CC=/opt/homebrew/bin/gcc-14 pip install --upgrade-strategy only-if-needed . | |
| - name: Install on Windows | |
| if: ${{ matrix.os == 'windows-latest' }} | |
| run: | | |
| meson setup build | |
| ninja -j 2 -C build | |
| cd build | |
| meson install --destdir=${{ env.Python3_ROOT_DIR }} | |
| - name: Run unit and integration tests Mac/Linux | |
| if: ${{ matrix.os != 'windows-latest' }} | |
| run: | | |
| rm -rf ./OMMBV | |
| cd .. | |
| coverage run -m pytest | |
| coverage report | |
| coverage xml | |
| mv coverage.xml ./OMMBV/. | |
| - name: Run unit and integration tests on Windows | |
| if: ${{ matrix.os == 'windows-latest' }} | |
| run: | | |
| rm ./OMMBV -r -force | |
| cd .. | |
| pytest ./OMMBV/tests -v --cov | |
| coverage report | |
| coverage xml | |
| mv coverage.xml .\OMMBV\. | |
| - name: Publish results to coveralls | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| COVERALLS_PARALLEL: true | |
| run: coveralls --rcfile=setup.cfg --service=github | |
| finish: | |
| name: Finish Coverage Analysis | |
| needs: build | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Coveralls Finished | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| run: | | |
| pip install --upgrade coveralls | |
| coveralls --service=github --finish |