remove close for pdb2sql memory database

DeepRank · Mar 24, 2020 · d74f2d5 · d74f2d5
1 parent 4ff6c7c
commit d74f2d5
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Showing 2 changed files with 1 addition and 5 deletions.
diff --git a/iScore/energetic/internal_energy.py b/iScore/energetic/internal_energy.py
@@ -91,10 +91,6 @@ def __init__(self,pdbfile,
         # entire residue containing at least 1 contact atom
         self.evaluate_charges(extend_contact_to_residue=True)
 
-        # close
-        self.sqldb.close()
-
-
     #####################################################################################
     #
     #   READ INPUT FILES

diff --git a/iScore/graphrank/kernel.py b/iScore/graphrank/kernel.py
@@ -441,7 +441,7 @@ def compute_px(self,g1,g2,cutoff=0.5):
         t0 = time()
         #n1,n2 = g1.num_nodes,g2.num_nodes
         self.px = [t[0]*t[1] if (float(t[0])>cutoff or float(t[1])>cutoff) else 0 for t in itertools.product(*[g1.nodes_info_data,g2.nodes_info_data])]
-        
+
         if self.debug:
             print('CPU - Px   : %f' %(time()-t0))