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Releases: Dongwon-Lee/gkmQC

gkmQC

23 Dec 07:22
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gkmQC Pre-release
Pre-release

v0.5-beta:

  • implemented evaluate, buildidx steps
  • faster null-seq generator, sequence fetch using memory mapping
  • Parallelization of pre-computing kernel matrix (by Dongwon)
  • TODO: local-regression-based estimation of AUC with SVM nu-value
  • TODO: automation of peak optimization step (supplied with macs2 calling flags and bam file)