Skip to content

Commit

Permalink
docs: Update README.md
Browse files Browse the repository at this point in the history
  • Loading branch information
@Rapsssito
Rapsssito authored Sep 20, 2024
1 parent b6cf873 commit f7e2686
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion README.md
View file
Original file line number Diff line number Diff line change
Expand Up @@ -69,7 +69,7 @@ mkdir -p benchmarking_datasets/mosaic_genomes/mosaic_genome_HMF
# Download data
```

Download and index the reference FASTA file. All CRAM files are aligned to GRCh37 (https://ftp.broadinstitute.org/pub/seq/references/Homo_sapiens_assembly19.fasta without scaffolds and supercontigs, only 1-22-X-Y-MT) using BWA-0.7.17 MEM.
Download and index the reference FASTA file. All CRAM files are aligned to GRCh37 (https://ftp.broadinstitute.org/pub/seq/references/Homo_sapiens_assembly19.fasta without scaffolds and supercontigs, only 1-22-X-Y-MT).

Download the example configuration file and edit it to match the paths of the tumorized and mosaic genomes, truth VCF files and reference FASTA file:

Expand Down

0 comments on commit f7e2686

Please sign in to comment.